KEGG   Oncorhynchus nerka (sockeye salmon): 115111596
Entry
115111596         CDS       T07952                                 
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115111596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115111596
Membrane trafficking [BR:one04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    115111596
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 115111596
NCBI-ProteinID: XP_029493666
Position
LG27:complement(17755414..17772362)
AA seq 1666 aa
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVAEKCVAPVW
KEEATFDLPLFHHGNAERCTLYIIVMHRALVGLDKLLGRAVINLLDLHDNSARKKTDWYK
LLDKNGKEDKVRGEVMMDIHFMRNNLTASMFDLSMQDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVVTDSEGEADSHSVCPESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNASLGGSRSSGLNVDSPDVKKKFKFLGHKRTGSNDSKVSTGPFSLLGRSKQKEDP
NSTCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSHRQPSDAALDSLKGAPVNTYRK
ESADRDRALLEQRRLQEEGEKRQAEEKRHNEEKQRVQLMVLQEEERKKQEEQERRFQEDE
ARRNKQQEEEEDRKRLAEERRRLKAGELQRQQEEAKKAEEQKQQEEASVTERLSSLFGMI
RKKEEKKEELQQSVANEVRHNPSPSHSTRDLEVPVPAPRHAANPLKDILLSPDPPIPFEE
SLVDHQKGVCGTNTPSAAVFNSNRTAKVSAVKPRLVESLKQPETPNSDSHRQQSPSLSCT
ESPLSSVPSESPDMFSNLHSSLAPPKTRRSTSESSCSSTENLTAIGSSPIGSERKRQAPL
SPSPMELHGNPNAGSRSVSANCGSLVSIKEVEAKRPPLPLPDYDRLFPQKRHGVQGQTQW
DHIIAEVNQRQQEYTSQLIGEEMSVDGPGLDSPAPPHNDKYLYLKERAAERLNQQRTQVQ
EVQSSSWRRVGPNSSPALIPPPKPGAAARPRLVMDSNKKQGQNTAQANKSVERHNAFVSK
VLGSTIPMAQSSNVPSVKPWEDARKVPKTSVALASEGHSVLPIEKPTRLTLTEVLVSSCT
DERKGLPNALKEIPATKPRQRLTSKEPVRQVDPEPKAAESTTNVQQENRSEMRAASIDMR
VSSPVMAKNTEVTANSEKQPSPDSVEGDNNKKQLERFMKETFSEPDPFPIAEVLPKYPWA
QPEQSHSGDDLFSGGPQKGDKLEELGMKTDDLVKHFTPNNSTDPSSSCNDSDSEKHPEEK
PEEPSPTSQRGFSQRKKERADFDSPAPPLTDKYSYLQERAAERLNQQRTQVQEVQSSSWR
RVGPNSSPALIPPPKPRRLEADSNKKQSQSIAQNNPSVERHNTFVSKVLVSTNPMAQSRD
VPSVKPREDARKVLNTSVSSANDGKSVLRLEKPNRPTPQVLVSSSTDEPKGLPNTPKEIP
SAKPRQCLVSKEQADPELTSAENTTVQQENRSEMRAVSTPDIMESSPTMAKATDSVESDI
HKKQLELIMKETFDDPFPIAEILPKDPWAQPEQSHSGDDLFSVGPQKDDKLEQRLTTDDL
VKLCVPNNPTDLFSSCNDSDPEKHPEEEKPEGPSPAFQRLFSQRKNKRAAPQPPANLSNK
GAMGKGELVKQDPSPRENETIRLATTGSVKLELQPKNTRQRNLYSREKVETQARKEKWTA
DPFTFSRMSSDLTSPEPPQSVGEPKPQAGAEGKTLLRAWVSTSEAQPLTVLSSNGDRPDL
TPLRPHPVKPMSSMESHALNTPVVREMKTYDSSLGNMKAPGKVESGPYTQLTQEELITLV
VKQQTELSKKDFKIVELEEYIDNLLVRVIEEKPSILQGLNSPKQAL
NT seq 5001 nt   +upstreamnt  +downstreamnt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtacaggtgaccgtgttc
caagccaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgccgagaaatgtgtcgcaccggtatgg
aaggaagaggcaacgtttgacctgccactgttccaccatggcaatgctgaacgctgcaca
ctatacatcatagtaatgcacagagctctggtgggactggacaagctcctgggacgagct
gtgatcaacctacttgatctacacgataacagcgcccgcaaaaagaccgattggtacaaa
ctgctggataagaatgggaaggaggacaaggtcagaggggaagtgatgatggacatccat
ttcatgagaaacaacttaacagccagcatgtttgacctttctatgcaagacaaaccacgc
tcccgcatcggaaagctcaaggacaaagtgcgtgggaaaaaaaaggacagcttctctgac
tcggcctctgcaatagtgccctctttcagccaggtagtcactgacagcgagggagaggct
gactcccactcagtatgcccagagtcccctggggccaagaaaaaatccaagctcaagtcc
ctctttgcccctaaatccaacctgcagcgcaatgtctcccagtccatgtccacactgggc
actcttccagagaagaacgcatccctcggtggcagtcgctcttctggcctcaatgtggat
tctcctgatgttaaaaagaagttcaagttcctgggccacaagcgcacaggcagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacagcacgtgcatcaacggcaatcatgtatatgcagaggaggtagaacccatgtctggg
tccaccctcagccttaacagctctggtcagggctcagtggaggatgtacgaagccacagg
caaccatctgacgccgccttagactctctcaagggcgcccctgtcaacacctacagaaag
gagtctgcagatagggatagggctctgctggagcaaaggcgccttcaggaagagggagag
aagaggcaggctgaggagaagagacataatgaggagaaacaaagagtgcagctcatggta
ctgcaggaggaggaacgcaagaaacaggaggagcaggagagaaggttccaggaggatgag
gcaaggaggaataagcagcaggaagaggaagaggaccggaagcggctagcggaagaaaga
aggcggctgaaggcgggtgagcttcagaggcagcaggaggaggccaagaaggcagaggag
cagaaacaacaggaggaggcctctgtgactgagaggctgtcctctctgtttggtatgatc
aggaagaaggaggagaagaaggaagagctgcagcagagtgtcgccaatgaggtgaggcac
aacccgtctcccagtcacagcaccagagatttggaggtccctgttcctgcccctcgccat
gctgccaacccactcaaggatattctcctcagtccagaccctccaatcccatttgaggag
agcctggtggaccaccagaagggtgtttgcggcaccaacaccccgagcgctgcagtcttc
aactccaaccgcactgccaaggtgtctgcagtcaagcccagattggtggagtctctgaag
cagcctgaaacccccaactcagactcccataggcaacaatctccctccctgtcctgcacc
gaatcccctctctctagcgtcccttctgagtctcctgatatgttctccaaccttcactcc
tccctggctccacctaagacacggaggagcacctctgagtcctcctgcagcagcactgag
aacctgactgccataggatcttcccctatcggatctgagaggaagcggcaagctcctctg
tcccccagcccaatggaactgcatggaaatcccaatgcaggctccagaagtgtgtctgct
aattgtggctctcttgtgtcaattaaggaggttgaggccaaaagacctcctctacctctt
cctgactatgatcgcctgttcccacagaagaggcatggagtacaaggacagactcaatgg
gaccatatcattgcagaagtgaatcagagacagcaggaatacacatctcagctcattgga
gaagagatgagcgttgatggcccaggcctcgactctccagcacctccacacaatgacaaa
tatttgtacttgaaggagagggcagcagaacgccttaaccagcaacggacacaagttcag
gaagttcaatcttcatcttggaggagagtggggcccaacagttcgccagcgctcatcccc
cctcccaaacctggagctgcagcccgccctagactagtgatggactcaaacaaaaagcaa
ggccagaacactgcacaggctaacaaatctgttgaaagacacaacgccttcgtctccaaa
gtcttgggctctaccattcctatggctcaaagcagcaacgtaccttcagtgaaaccttgg
gaagatgcaaggaaggtgcctaaaacatcagttgctttagccagtgaaggccattctgtt
ctcccaatagaaaagcctactagacttacattaacagaagttttggtgtcaagttgtaca
gatgaacgtaaaggactgccgaacgctctcaaagagatccccgcaaccaaacccagacaa
aggttaaccagcaaagagccagtgagacaagtggatcctgagccaaaagcagcagagtct
actaccaatgtacagcaggagaacagatcagaaatgagggcagcctccatagacatgaga
gtgagtagtccagtcatggcaaagaatactgaggtaactgctaacagtgaaaagcaaccc
tcacctgactctgtagaaggcgacaataacaaaaaacaactggaacgctttatgaaagag
acattttctgaacctgacccttttcccattgcggaggtcctgcctaaatacccatgggct
caaccagagcagagccacagtggagatgacctgttctctggaggaccacagaaaggggac
aagcttgaagaactgggaatgaaaactgatgacttggttaaacattttacgccaaacaat
tcaacagatccgtcctccagctgtaatgacagtgactcagaaaagcatccagaggaaaaa
ccagaagagcccagtcctacttctcaaaggggattttcacaaaggaaaaaggaacgcgca
gacttcgactccccagcacctccacttactgacaaatattcctacttgcaggagagggca
gcagaacgcctaaaccagcaacggacacaagttcaggaagttcaatcttcatcttggagg
agagtggggcccaacagttcaccagcgcttatcccccctcccaaaccccgtagactagag
gccgactcaaacaaaaagcaaagccagagcattgcacagaataatccatctgttgaaaga
cacaacaccttcgtctccaaagtcttagtctctacaaatcctatggctcagagcagagat
gtaccctccgtgaaacctcgggaagatgcaaggaaggtgcttaacacatctgtttcgtca
gccaatgatggcaaatctgttctacgactagaaaagcctaatagacctacaccacaagtt
ttggtgtcaagttctacagatgaacctaaaggactgccaaacactcccaaagagatcccc
tcagccaaacccagacaatgtttagtcagcaaagagcaagcagatcctgagctaacatca
gcagagaataccactgtacagcaggagaacagatccgagatgagggcagtctcaaccccg
gacatcatggaaagtagtccaacgatggctaaagctactgactctgtagaaagcgacatt
cacaaaaaacaactggaactcattatgaaagagacgtttgatgaccctttccccattgct
gagatcctgcctaaagacccatgggcccaaccagagcagagccacagtggcgatgacttg
ttctctgtaggaccacagaaagacgacaagcttgaacagagactgacaactgacgatttg
gttaagctttgtgtgccaaacaacccaaccgatctgttctccagttgtaatgacagtgac
ccagaaaaacatccagaggaagaaaaaccagaagggcccagtcctgcttttcaaagatta
ttttctcaaaggaaaaataaacgagcagcacctcagcctccagctaatttgagcaataaa
ggagccatgggaaaaggtgagctggttaaacaagacccttcacccagagaaaacgaaaca
atcaggttagccactacaggatctgtgaaacttgagctgcaacccaaaaatactagacag
agaaatctctatagtagagaaaaggtagaaacccaagccaggaaagagaagtggacagca
gacccttttaccttctcccgcatgtcttctgacctgacttctcctgagcctccccagtca
gtaggtgagcccaaaccccaggcaggggctgagggtaagaccctgctacgggcctgggtc
tcaacctctgaggcgcagccactcactgttctgagtagcaatggagatcggccagactta
acaccactcaggcctcacccagtgaagcccatgagctccatggagagccatgctctcaac
accccagtggtgagggagatgaagacctatgacagctcactgggaaatatgaaggcacca
ggtaaggtggagagtgggccatacacccagctgacccaggaggagctgattaccctggtg
gtgaagcagcagacggagctctccaagaaggacttcaagatcgttgagttggaggagtac
atagacaacctgctggtgcgtgtcatcgaggagaagcccagcatcctgcaaggcctcaac
tctcccaagcaggccctgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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