KEGG   Oncorhynchus nerka (sockeye salmon): 115113075
Entry
115113075         CDS       T07952                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagocytosis
one04517  IgSF CAM signaling
one04540  Gap junction
one04814  Motor proteins
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115113075
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    115113075
  09144 Cellular community - eukaryotes
   04540 Gap junction
    115113075
  09142 Cell motility
   04814 Motor proteins
    115113075
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115113075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115113075
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115113075
   04147 Exosome [BR:one04147]
    115113075
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115113075
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115113075
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115113075
  Exosomal proteins of colorectal cancer cells
   115113075
  Exosomal proteins of bladder cancer cells
   115113075
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 TrmK
Other DBs
NCBI-GeneID: 115113075
NCBI-ProteinID: XP_029496157
Position
LG28:complement(16585615..16588167)
AA seq 445 aa
MREIVYIQAGQCGNQIGAKFWEVISEEHGINCTGDYVGDSDLQLDKISVYFNESSFSKYV
PRAILVDLEPGTMDSVRCGHIGHLFKPDNFIFGQSGAGNNWAKGHYTEGAELVEAVMDVV
RKEADNCDCLQGFQLTHSLGGGTGSGMGTLLINKIQEEYPDRMMATFSVVPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEAIYDICFRKLKLPTPTYGDLNHLVSVTMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFILGFTPLTNRGGLQYRALTVPELTQQAFDAKNMM
AACDPRNGRYLTAAMVFRGHMSMREVDEQMLAIQNKNSSYFVDWIPNNIKTAVCNIPPPG
LKLSATFIGNNTAIQELFKRLSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATTEEEVFEDEEEEKGIA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcgagaaatcgtttacattcaagctggccagtgtggcaaccagatcggcgcaaagttc
tgggaggtgattagtgaggagcatggaatcaactgcactggggactatgtgggcgactca
gaccttcagctggacaagatcagtgtctacttcaacgaatcctcgttctccaagtatgtc
cccagagccatcctagtggacctggagccaggaacaatggatagtgtgcgctgcggacac
ataggacacctctttaaaccggacaatttcatcttcggtcagagtggagctggtaacaac
tgggctaagggccactacacagagggagcagagctagtggaagcagtgatggacgtggtg
aggaaggaggcagataactgtgactgtctccagggcttccagcttacccactccctgggc
gggggcacaggctctggcatggggaccctactcatcaacaagatccaggaggagtacccc
gaccgtatgatggccaccttcagcgtggtcccctcccctaaggtgtcggacacggtggtg
gagccctacaacgccaccctctctgttcaccagcttctagagaacacagacgaaactttc
tgcatcgacaatgaggcgatctacgacatctgcttccgcaagctcaagctccccacaccc
acctacggagacctcaaccacttggtgtcggtcaccatgagcggggtgaccacatgcctt
cgcttcccaggccagctcaacgcagacctccgcaagctggccgtcaacatggtacccttc
ccccgcctgcacttcttcatactgggcttcaccccactcactaacagggggggcctgcag
taccgtgccctcaccgtgcctgaactcacccagcaggcgttcgacgccaagaacatgatg
gcagcctgcgacccgcgtaacgggcgctacctcactgcggcgatggtgttccggggtcac
atgtctatgagggaggtggacgagcagatgctggccattcagaacaagaacagcagctac
tttgtggactggatccccaacaacattaagacagcggtctgtaatatcccaccccctgga
ctcaagctgtccgccaccttcataggtaacaatacagccatccaggagctgttcaagcgt
ctctctgagcagttcaccgctatgttccgtcgcaaggccttcctgcactggtacacggga
gagggaatggacgagatggagttcaccgaggccgagagcaacatgaatgacctggtgtct
gagtaccagcagtaccaggacgccaccactgaggaggaggtgtttgaggatgaagaggaa
gaaaaaggaatagcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system