KEGG   Oncorhynchus nerka (sockeye salmon): 115139866
Entry
115139866         CDS       T07952                                 
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagocytosis
one04517  IgSF CAM signaling
one04540  Gap junction
one04814  Motor proteins
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115139866
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    115139866
  09144 Cellular community - eukaryotes
   04540 Gap junction
    115139866
  09142 Cell motility
   04814 Motor proteins
    115139866
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115139866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115139866
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115139866
   04147 Exosome [BR:one04147]
    115139866
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115139866
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115139866
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115139866
  Exosomal proteins of colorectal cancer cells
   115139866
  Exosomal proteins of bladder cancer cells
   115139866
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 115139866
NCBI-ProteinID: XP_029533570
Position
LG13:complement(44159690..44162451)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattgtgcatcttcaggctggacagtgtggaaaccagatcggagctaagttc
tgggaggtgatcagtgacgagcatggcattgacccaactggtacataccatggggacagt
gacctccagctagataggattaacgtgtactacaatgaagcctcaggtggtaaatacgtg
ccccgcgctgtgcttgtcgacttggagccagggaccatggactctgtgagatccggaccc
ttcggccagatcttcagacccgacaactttgtgttcggccagagtggtgctggaaacaac
tgggccaagggccactacacagagggagctgagctggtggactcagtcctggatgttgtg
aggaaggaggcagagagctgtgactgtctgcagggcttccagctcacccactccctggga
ggtggaactggctctggcatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gaccgcatcatgaacaccttcagcgtggtgccctcacccaaagtatcagacactgtggtg
gagccctacaatgccaccctgtcagtccaccagctagtggaaaacactgacgagaccttc
tgtattgacaacgaggctctctacgacatctgcttccgtaccctgaaactcactactccc
tcctacggtgacctcaaccacctggtgtcggccacaatgagcggcgtcacaacctgcctg
cggttcccaggacagctgaatgctgacctccgcaagctggctgtcaacatggtgcccttc
ccccgcctccacttcttcatgcccggatttgcccccctcacaagcaggggaagccagcag
taccgctccctcactgttcccgagctcacccagcagatgttcgacgccaagaacatgatg
gccgcctgcgacccccgccacggacgctaccttacagtggccgccatcttccgcgggcga
atgtccatgaaggaggtagacgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgttgaatggatccccaacaatgtcaagaccgccgtctgcgacattcccccgcgtggc
ctcaagatggccgccaccttcattggcaacagcacagcaatccaggagctgttcaagcgt
atctccgagcagttcacagccatgttcaggcgtaaggctttcctccattggtacacaggt
gagggtatggatgagatggagttcactgaggcagagagcaacatgaatgacctggtgtct
gagtaccagcagtaccaggacgccaccgctgaggaggagggagagtttgaggaggaggga
gaagaggagctggcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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