KEGG T06104: 100694522

Oreochromis niloticus (Nile tilapia): 100694522

Entry

100694522         CDS       T06104

Symbol

cwc22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

onl Oreochromis niloticus (Nile tilapia)

Brite

KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onl03041]
    100694522 (cwc22)
Spliceosome [BR:onl03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    100694522 (cwc22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    100694522 (cwc22)

SSDB

Motif

Pfam:

MA3 MIF4G Cnd1 DUF7026

Other DBs

NCBI-GeneID:

100694522

NCBI-ProteinID:

XP_025759515

Ensembl:

ENSONIG00000006885

Position

LG16:24057755..24072284

AA seq 970 aa
MDSADRSRSPSPAQRENSGPSENDSSPASGRPQQAGSVERSPNERRSPQPSPVGRRPSRS
PSSSSSDSTSSSDEDEHHSALRKIRSSVAQIKRSRSRSKEQDRSRSKEEDRSRSRDTDRS
RSRSREKNRSRERDRSRSREKDRSTSRGRARSRSRSRGRERSRSRGRDRSRSRERDRDRY
DRRRYARDRYDDRRDDRDGRFDRRANREADSDYRRRGRSASPLADREPAAADEPPVKKKK
EELDPILTRTGGAYIPPAKLRLMQQQITDKSSLAYQRMSWEALKKSINGLINKVNVSNII
NIIQELLQENIVRGRGLLARSILQAQTASPIFTHVYAAVVAIINSKFPQIGELILKRLIL
TFRRSYRRNLKQQCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKE
CGLKLTEVSPRGINAIFERLRNVLHESSIDKRVQYMIEVMFAIRKDGFKDHPVIPEGLDL
VDEDDQFTHMLPLDDEYNTEDILNVFKMDPDFLENEEKYKTIKKDILDEGSSDSGEEGDG
SDDDDDDDEDENEEEGDDEKVTIFDKTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDF
PESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEAIFSEQYDTIHRLET
NKLRNVARLFAHLLYTDSVPWSVLECIKMSEDTTTSSSRIFVKILFQELCAYMGLPKLNQ
RLKDQTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEV
ESSDSSSTSSSSSSSSDSSSSDSSSESDSDSSDSSSSSDSDSKHRKKKKRKGQSEEGRKK
TREKDKKKKSSDKKRAGRRADNDEDSDSEKRAKKDDRGRARDPEGVNATAPGGADETTDR
KRRTRGRRWRRGDEKWTGKEMTDGRERETEGGRERGSERGRERMRQRGRGSERGRERMRQ
RGTQPVVLWI

NT seq 2913 nt +upstreamnt +downstreamnt
atggactctgcagacagaagtcgaagtcccagtcctgcacagagagaaaacagtggacct
tcagagaatgactctagtccagcatcaggcagaccccagcaggctggctcagttgaaaga
agccccaatgagcgacggtccccacagccaagtcctgtgggccgcaggccctccaggagc
ccatcctcaagcagttcagacagcaccagcagcagtgatgaggatgaacatcattcagca
ctgagaaagattcgaagcagcgtggctcagatcaaaagatcaagatcaagatccaaagag
caagacagatccaggtccaaggaagaagatcggtccagatccagggatacagacagatcc
agatccagatccagagagaaaaatagatcccgagaaagagacagatccagatccagggaa
aaggacagatctacatctagagggagggcgagatcaagatcaagatccagaggaagagag
aggtcgaggtcaagaggacgtgacagatcccgatccagggagagggacagggaccgttat
gacagaagacgttatgcacgggatcgctatgatgatcggcgtgatgacagagatggccgt
tttgaccgacgagccaatcgagaggctgattcagattacaggaggcggggtcgctccgct
tcccctctggctgacagggaaccagctgcggccgatgagccgccagtcaaaaagaaaaag
gaggagcttgatccaatcctgacgaggactggaggcgcttacattcctcccgctaagctg
cgcttgatgcagcagcaaatcactgacaagagcagcctggcctatcagaggatgagctgg
gaagctctaaagaagtccatcaacggtcttatcaacaaagtcaacgtatccaacattatc
aacatcatccaggagctgctgcaggaaaatatcgtcaggggaaggggactgctggctcgc
tcgatactgcaggctcagacggcctctcccattttcactcatgtctacgctgctgtcgtt
gccatcatcaactcaaagttccctcagatcggagagctgatccttaaacgtctcatactg
actttcaggagaagctaccgccgcaacctcaagcaacagtgcctgaccgcgtcaaagttc
gtggctcatctcatcaaccagaacgtggcccacgaggttttgtgtctggagatgctcact
ctgctgctcgagcgtccaactgatgacagtgtggaggtcgccatttccttcttgaaggaa
tgtggtctcaagctgaccgaagtgtcccctcgaggaatcaacgctatatttgagcgtctt
aggaatgtcctccacgagtcgtccattgacaagagggtccagtacatgatagaggtgatg
tttgctatcaggaaagatggtttcaaagatcatccagtaatcccagaaggcctggatctg
gtggatgaggatgaccagttcactcacatgctgccgctagatgatgaatacaacaccgag
gacatcctcaatgtatttaagatggatccagacttcctggagaatgaggagaaatataaa
actattaaaaaagatatcctggatgagggtagcagcgattcaggggaggagggagatggc
agtgatgacgacgacgatgatgatgaagatgagaatgaggaggaaggagatgatgagaaa
gtcaccatctttgataagacagaagtcaacctggttgctttcagaagaaccatctacctc
gctattcagtccagcttggactttgaggagtgtgctcacaaactgattaagatggacttc
ccggaaagccaaacgaaggagctgtgcaacatgatcctggactgctgcgctcagcagagg
acctacgagaagttttttggcctgctggctgggaggttctgtctgttaaagaaggagtac
atggagagtttcgaggcgatattttcagagcagtatgacacgattcaccgactggaaacc
aacaaactgaggaacgtggcccgactgttcgctcacctgctctacacagattctgtgccg
tggagtgtgttggagtgcatcaagatgagtgaggacaccacaacgtcgtccagcaggatc
tttgtaaagatcctattccaggagctctgtgcctacatgggtctgccaaaacttaaccag
aggctgaaagaccagaccctgcagccgttctttgaaggtctctttcctcgtgataatccc
agaaacactcgcttcgccatcaacttcttcacttctattggactgggaggactcactgat
gagctgagggaacatttgaaaaacgcgccaaagatgatcatgactcagaaccaggaagtc
gaatcatcggactcctcctcgacatcatcctcgtcgtcttcttcgtcagattcctcctcc
tccgactcatccagcgagtcagattcagactcgtcagactcctcgagcagctcagactca
gactctaaacacaggaagaagaagaagaggaaaggacagagcgaagaggggaggaagaaa
acgagagagaaggacaagaagaagaaatcttcagacaagaagcgagctggacgcagagca
gacaatgatgaggacagcgacagcgagaagcgggcgaagaaagacgacagggggcgcgca
cgtgacccggagggcgtgaacgcgacggcgcccggcggagcagacgagacgacagatcgg
aagaggaggacgagggggcggcggtggaggagaggagacgaaaaatggacaggcaaagag
atgacggacgggagagagagagagacagagggagggagagagagagggagcgagcgaggg
agagagagaatgaggcagagagggagagggagcgagcgagggagagagagaatgaggcag
agagggacccaacctgtggtgctgtggatctga

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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