KEGG   Orcinus orca (killer whale): 105747954
Entry
105747954         CDS       T05247                                 
Symbol
PAPOLB
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105747954 (PAPOLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oor03019]
    105747954 (PAPOLB)
Enzymes [BR:oor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     105747954 (PAPOLB)
Messenger RNA biogenesis [BR:oor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     105747954 (PAPOLB)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 105747954
NCBI-ProteinID: XP_033282574
Position
16:84463777..84478160
AA seq 634 aa
MMPFPVTTPGSQQTPPPPKHYGVSSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQ
RRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRSDFFTSFYGKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPKEKPDREGFRTMWVIGLVLKKPENSDVLSIDLTYDIQSFTDTVYRQAINSKMFEM
DMKIAAMHLRRKELHQLLPGHVLQKKKTHSMEGVRWTALDDGSLDLSVDSEDSTSVSSLP
GSMKTGPVTGSAQGRSIPAPAVMAASVTSVQVPEVSLQQANPSDSLGSTSSGSVPQTAPQ
PNISPPPKPMVTRVVSSTPLVNIHPGLQGAQQQT
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgatgccgtttccggtgaccaccccgggatcacaacagaccccgccgccgcccaagcac
tatggcgtctcctcccccatcagtttagcaccccccagggagactgactgcatacttacc
cagaaattaattgaaaccctgaagccctttggggtttttgaagaggaagaggaactacag
cgcaggattttaattttggagaaattaaataacctggtaaaggaatggatacgagaaatc
agtgaaagcaagagtcttccacaagctgtaatagaaaacgttggagggaaaatctttaca
ttcggttcttatagattaggggtgcatacgaaaggtgccgatatcgacgcgttgtgcgtg
gcaccaagacatgttgatcgaagcgactttttcacctccttctatggtaaattgaaacta
catgaagaagtaaaggatttaagggctgttgaagaggcatttgtaccagttatcaaactg
tgttttgatgggatagagattgatattttgtttgcaagattagcactgcagactattccg
gaagatttggacctaagagatgacagtctgcttaaaaacttagatattaggtgcataaga
agtcttaatggttgccgggtaactgatgagattttacatctggtaccaaacattgacaac
ttcagattaactctgagagccatcaagttgtgggccaaatgccacaatatctattccaat
atattaggtttcctaggaggtgtttcctgggcgatgctagtagcaagaacttgccagctt
tatccaaatgcgatagcatcaactcttgtacgtaaatttttcttggtgttttctgaatgg
gaatggccaaatccagtgctactgaaagagcctgaagaacggaatcttaatttgcctgtc
tgggacccaagagtaaatcccagcgataggtaccatctcatgcctataattacaccagcg
tacccacagcagaactccacgtacaacgtgtctgtttcaacaaggatggtcatgattgag
gagtttaagcaagggcttgctattacacatgagattttgctgagtaaggcagagtggtcc
aaactttttgaagctcccagcttctttcaaaagtacaagcattatattgtacttctagca
agtgcgccaacagaaaaacaacatctagaatgggtgggcttggtggaatcaaaaatccga
atcctggttggaagcttggagaagaatgaatttattacactggcacatgtgaatcctcag
tcgtttccagcacccaaggaaaagcctgacagggaaggatttcgtacaatgtgggtgatt
gggttagtgttaaaaaagccggaaaactctgacgttctcagtattgatctcacctacgat
atccagtctttcacagatacagtttataggcaagcgataaatagtaagatgtttgagatg
gatatgaaaattgctgcaatgcatttgagaagaaaggaacttcatcaactactacctggt
cacgtgcttcagaagaagaaaacacactcgatggaaggtgtcagatggacagctttggat
gacggcagcctcgacttgtctgtagacagtgaagacagcacgtctgtgtcttcacttcct
ggctctatgaagactggcccagtgactggcagcgctcagggcagaagcattcctgccccg
gctgtgatggcagcatctgtgaccagcgtacaggttcctgaagtttccttacaacaagca
aatcccagcgacagcctggggagcacgtccagcggaagcgtccctcagactgccccacaa
ccaaatatttctccaccgccgaagcccatggtcaccagagttgtttcctcaacacctctg
gtcaacatccacccaggccttcagggagcgcagcagcaaacatag

  All links  
Gene (7)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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