KEGG   Occallatibacter riparius: MOP44_19375
Entry
MOP44_19375       CDS       T08486                                 
Name
(GenBank) integration host factor subunit beta
  KO
K03530  DNA-binding protein HU-beta
Organism
orp  Occallatibacter riparius
Brite
KEGG Orthology (KO) [BR:orp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:orp03032]
    MOP44_19375
   03036 Chromosome and associated proteins [BR:orp03036]
    MOP44_19375
   03400 DNA repair and recombination proteins [BR:orp03400]
    MOP44_19375
DNA replication proteins [BR:orp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MOP44_19375
Chromosome and associated proteins [BR:orp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MOP44_19375
DNA repair and recombination proteins [BR:orp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MOP44_19375
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267
Other DBs
NCBI-ProteinID: UWZ82720
UniProt: A0A9J7BIT5
Position
complement(4785400..4785708)
AA seq 102 aa
MIKQDIVHHVIERTGLPRTKAEAAVDTVFEGLKQALAAGERIELRGFGVFSVRARKTGIG
RNPRTGTEVSITPGKAVRFKPGKDLHALEGDSSGGSTPANGE
NT seq 309 nt   +upstreamnt  +downstreamnt
ttgattaagcaggacattgttcatcatgtgattgagcgcactggcctgcctcggaccaag
gcagaagcggccgtcgatacggtgttcgaaggcttgaagcaggctttggcagcgggcgaa
cgaatcgagctgcggggatttggcgtgttcagcgtacgggcgcgcaagacgggcattgga
cggaatccgcgcacggggaccgaagtcagcatcacgccgggcaaggcggtccgattcaag
ccgggcaaagacctgcacgcgctggagggcgacagctccggcggcagcacacctgcaaac
ggcgaataa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (7)   

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