KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121340547
Entry
121340547         CDS       T07590                                 
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
  KO
K14327  regulator of nonsense transcripts 2
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03013  Nucleocytoplasmic transport
otc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121340547 (UPF2)
   03015 mRNA surveillance pathway
    121340547 (UPF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otc03019]
    121340547 (UPF2)
Messenger RNA biogenesis [BR:otc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     121340547 (UPF2)
   mRNA cycle factors
    P-body specific factors
     121340547 (UPF2)
SSDB
Motif
Pfam: MIF4G Upf2
Other DBs
NCBI-GeneID: 121340547
NCBI-ProteinID: XP_041269295
Position
Unknown
AA seq 1271 aa
MPAERKKPANMEEKESQLNNKEKEFSERRPVSTREKPKEDVKVGVKRETLKVPEDKKKKM
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEEAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPESRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKYSQNKDSSKDESRDSKDAKDNKEAAGNEDLELELENLDINDDALELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAVRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq 3816 nt   +upstreamnt  +downstreamnt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctcagttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccgaaagaagat
gtgaaggttggtgtgaagagagagactttaaaggttcctgaagataaaaagaaaaaaatg
gaagaggataaaagaaagaaggaagacaaggagcggaagaaaaaagaggaggataaagta
aaggcagaagaggagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagaagctgctcaactg
aaggagaaggaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaagg
aaagagctccgcagcaaaaaccagaacgcaccggagagtcgtccggaggaaaacttcttc
agcaggctggactccagtctgaagaagaacactgcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactcgttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaggccaaactgaaaatatcagacgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgatacgctgattttgctccttcgttactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtttgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacactcacgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaggtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
agacgtattctccactccaaaggagagctgagtgaagatcgacacaagcagtatgaggaa
tttgcaatgtcgtatcagaagctcttggcaaattctcagtctctggctgatcttttggat
gagaacatgcctgacctccctcaagagaagccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagat
gaagatgctagaaacttctatgagaatctcattgacttgaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatattcccagaacaaggattccagcaaagatgaatcaaga
gattcaaaagatgccaaagataataaagaagcagctgggaatgaggatctggaattggag
ctggagaacctggatattaatgatgatgcactggagttggactgtggagatgaggcagaa
gatcttacaaagaaacttcttgatgagcaagagcaagaggatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttcttcagcagcttccaaattgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactggtccgagcacttttcatagttcccagacaaagattggatttgctaccattt
tatgcaagactggttgccacattgcatccctgtatgtctgatgtagcagaggatctctgt
tccatgctgagaggcgatttcaggttccatgtaagaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtgagatttattggtgagcttaccaagtttaagatgttctccaaa
aacgatactctccactgtttaaagatgcttctgtcagacttctctcatcaccatattgaa
atggcgtgtaccttgctggaaacctgtggaagattcctcttcagatcaccagaatctcac
ctaagaaccagtgttcttttggagcaaatgatgaggaaaaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcctattactactgtaatccccctccagctgaa
aaaactgtgaagaaaaaacgtcctcctttgcaggaatatatccgtaagcttctttacaag
gatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcagaagttaaggactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagatgtg
ggaattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaatcaa
ccaaagttcaaccaacggcggatcagcagtgccaagtttttgggggagctttacaattac
cgaatggtggagtcagctgtaatatttagaactctgtattccttcacctcgtttggtgtg
aaccctgatggcagtcctagtccactggaccctccagaacatcttttcagaatcagactt
gtctgtactatcctcgatacctgtgggcagtattttgacagaggatccagcaagcggaaa
cttgattgcttccttgtatattttcagcgctatgtgtggtggaaaaaaagtctggatgtt
tggacaaaagaccacccttttcctatagacatagactatatgatcagtgatacactggaa
ctgctgagaccaaagataaagctctgcaattctctggaagaagctgtcagacaggtgcaa
gacttggaacgagaattcttaataaaattgggaattgtcaatgacaaagattccaaggat
tccattacagaaggagagaatctggaagaggatgaagaagaggaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctct
gacaatgaggaagaagagggtgaagaagaggaggaagagaacaccgattatcttacggac
tccaataaggaaaatgaaactgatgaggagaatacagaagtaatgattaaaggaggagga
ctgaagcatgtcccttgtgcagaggatgaggacttcattcaggccttggataaaatgatg
ctggaaaatcttcagcaacggagtggtgaatctgttaaagtgcatcagctggatgttgct
attcctctgcatctcaaaagtcagctgaagaagggccccccacttggaggtggggaagga
gagtcagagtctggggacacaatgccatttgtcatgttaacaagaaaaggcaacaaacag
cagtttaagatcctaaatgtaccgatgtcttcccaacttgctgcaaaccattggaaccaa
cagcaagcagaacaggaggagagaatgaggatgaaaaagctcactctggatatcaatgaa
cggcaggaacaagaggactatcaggaaatgttgcagtctctggcacagcgtccagctcca
gcaaatactaatcgtgagcggcggcctcgttaccagcatccgaagggagcacctaatgca
gatctaatctttaaaaccggtgggaggagacgttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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