KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112233579
Entry
112233579         CDS       T05605                                 
Symbol
actr3b
Name
(RefSeq) actin-related protein 3B
  KO
K18584  actin-related protein 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144  Endocytosis
otw04517  IgSF CAM signaling
otw04530  Tight junction
otw04810  Regulation of actin cytoskeleton
otw05100  Bacterial invasion of epithelial cells
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    112233579 (actr3b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112233579 (actr3b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112233579 (actr3b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    112233579 (actr3b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112233579 (actr3b)
   05100 Bacterial invasion of epithelial cells
    112233579 (actr3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112233579 (actr3b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:otw04812]
    112233579 (actr3b)
   04147 Exosome [BR:otw04147]
    112233579 (actr3b)
Membrane trafficking [BR:otw04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    112233579 (actr3b)
Cytoskeleton proteins [BR:otw04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     112233579 (actr3b)
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112233579 (actr3b)
  Exosomal proteins of other body fluids (saliva and urine)
   112233579 (actr3b)
  Exosomal proteins of bladder cancer cells
   112233579 (actr3b)
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA Pcf11_C ALP_N
Other DBs
NCBI-GeneID: 112233579
NCBI-ProteinID: XP_024257088
Position
LG29:21778281..21796780
AA seq 418 aa
MATPLPPCVIDCGTGYTKIGYAGNTEPQFIMPSCIAIRESAGVGDQAQRRLVKGVDDLDF
FIGDEGIDKPNYATKWPIRHGMVEDWDLMEKFMEQIIFKYLRAEPEDHSFLMTEPPLNTP
ENREYLAEIMFETFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHAIPV
AEGYVIGSCIKHIPIAGRDITLFIQQLLREREVGIPPEQSMETAKAVKERYCYICPDIVK
EFAKYDTDPGKWIKKYKGINAINKSEFHIDVGYERFLGPEIFFHPEFANPDFMQPISDIV
DEVIMNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRSVDARLKLSEELSGGRIKP
KPMEVLVVTHHMQRYAVWFGGSMLASTPEFLQVCHSKKDYDEFGPSICRHNPVFGTMS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcaactcctctacctccttgcgtgatagattgtgggacagggtacaccaagattgga
tatgctggaaacacagagccacagtttatcatgccatcctgcatcgctatacgagagtca
gccggtgtaggagaccaggcacagaggcgacttgtgaagggagtggatgacttggatttc
tttataggagatgaaggcattgataagcccaactatgcaaccaagtggcccatcagacat
gggatggtggaagactgggatttgatggaaaagttcatggagcagatcatcttcaagtat
ctgcgggcagagcctgaagaccatagcttccttatgacagagcctccgttgaacacgcca
gagaacagagagtatctggctgagatcatgtttgagacctttaatgtcccaggcctgtac
atcgcagtgcaggcagttctggccctggcagcatcatggacatctagacaagtaggcgag
cgaacactgacaggaatcgtgattgacagcggagatggagtcacccacgccatacctgtg
gctgaaggctacgtcattgggagctgtataaaacacatccccatagcaggtcgagacatc
accttgtttattcagcagctcctcagagagagggaggtgggcatccccccagaacagtcc
atggagacagccaaggcagtcaaggagaggtactgctacatctgtccagacattgtgaag
gaatttgccaaatatgacacggaccctgggaaatggatcaagaagtacaaaggcatcaat
gccatcaacaaatctgaattccacatagacgttggatatgaacgctttttaggtccagaa
atattctttcatccagagtttgccaacccagacttcatgcagccaatctcagatatagtt
gacgaggttataatgaactgtccaatagatgtcagaagacctctatataagaatattgtc
ctgtctggcggttccaccatgttcagagactttggccggcggctgcagagagacctgaag
cggtcggtagatgcccggctcaaattgagtgaggagctcagtggaggaaggataaagccc
aagcccatggaggtcctggtggttacacaccacatgcagcgctatgccgtgtggttcgga
ggatccatgcttgcctctacgcctgagtttctccaggtttgtcactcaaaaaaggactac
gatgagtttggtcccagcatctgccgccataaccctgtctttggtaccatgtcctaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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