KEGG   Paraburkholderia acidiphila: FAZ97_07390
Entry
FAZ97_07390       CDS       T07262                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pacp  Paraburkholderia acidiphila
Pathway
pacp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pacp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FAZ97_07390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pacp03400]
    FAZ97_07390
Enzymes [BR:pacp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FAZ97_07390
DNA repair and recombination proteins [BR:pacp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FAZ97_07390
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: QGZ54754
UniProt: A0A7Z2G4P8
Position
1:complement(1659335..1660387)
AA seq 350 aa
MQDARNAPSRTSARTPRGERARTSDAAAPATPAASVHRLPRTTRRRRDDAAETEIDGIRI
TSTRRVIDADSGTHKLELVRYYERAAPWILPHLRDRPVSLVRAPRGLSGEMFFQRHSARA
PLPELTEHEGLDPGHPPLLTIDTARALVSAAQMDVIELHTWNASVHDIERPDRVLFDLDP
DPALGWDRVIEVAQSTRALLAELKLESFCKTSGGRGLHIVVPLTPAAGWEDAKAFARAVA
QHLAAVWPTQITATMGPEHRKKKIFIDYLRNARGASTALAYGVRARPGMGVSVPIDWDEL
ASTTGGAQWTLATIDARLTQIEHADPWAAYGRVRQKLTAELTLGLEAAGK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaggacgcccgcaacgccccatccaggacatctgcccgaacgccgcgcggcgagcgg
gccaggacatcggacgccgccgcgccggccacgcctgccgcgtccgtgcaccgcttgcct
cgaaccacccggcgccggcgcgacgacgcggccgaaaccgaaatcgacggtatacgcatc
acgagtacgaggcgcgtcatcgatgcggacagcggcacgcacaaactcgaactcgtgcgc
tactacgagcgcgcggcgccctggatcctgcctcatctgcgcgatcgccccgtatcgctc
gtgcgcgcaccgcgcggcttgagcggcgaaatgttctttcaacgccacagcgcacgtgcg
ccgctgcccgaactcaccgaacacgaagggctcgacccgggccatccgccgctgctgacg
atcgatacggcgcgcgcgctggtcagcgctgcgcagatggacgtcatcgagttgcacacc
tggaacgccagcgttcacgacatcgagcggcccgatcgggttctcttcgacctcgacccc
gatccggcgctgggctgggatcgcgtgatcgaggtggcgcaatccacgcgcgcattgctt
gcggaactcaagctcgaatcgttttgcaaaacgagcggcggcagggggctgcacattgtc
gtgccgctcacgccggccgcgggctgggaggatgcgaaggcgttcgctcgcgcggttgcc
cagcatctggccgcggtctggcccacgcagatcacggcgaccatgggccccgagcaccgc
aagaagaagatcttcatcgactatctgcgcaatgcgcgcggcgcgagcacggcgctcgca
tacggcgtgcgggcgcggccgggcatgggcgtgtccgtgccgatcgattgggacgaactg
gcgtcgacgacgggtggcgcgcaatggacgcttgcgaccatcgacgcgcggctcacccag
atcgagcacgccgatccctgggcggcctatggccgcgtgcgccagaagctgacagcggaa
ctgacgctgggtctcgaagcagccggcaagtag

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