KEGG T00372: Patl

Paraglaciecola sp. T6c: Patl_0021

Entry

Patl_0021         CDS       T00372

Name

(GenBank) 16S rRNA m(5)C-967 methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

pat Paraglaciecola sp. T6c

Brite

KEGG Orthology (KO) [BR:pat00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pat03009]
    Patl_0021
Enzymes [BR:pat01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     Patl_0021
Ribosome biogenesis [BR:pat03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Patl_0021

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB RsmF-B_ferredox Methyltransf_31 Methyltransf_25 FtsJ Methyltr_RsmF_N POR

Other DBs

NCBI-ProteinID:

ABG38554

Position

complement(24986..26299)

AA seq 437 aa
MSQSKGRYQQNLRADAARVLFQILEQGMSARECLPAAQQDHNEKDKAWLQEMTYGVLRQL
PLLQHWLRLLLDKPLKKNVKVVEHLIMLGFYQLAFSRVSTHAAVSECVNACAPLNAIATK
GLVNAVLRNFIRQDTAHNLPDNEQVLSGQPKWFYKKLVDAYPDNYKTILDAMQVKAPIWL
RVNNKHKSTDEYCRLLDDRDVAYERQATQPQGIILSKGCDITTLPGYDEGWFAVQDGAAQ
LAAGLLGSQPNDRVLDCCAAPGGKTCHIIELQPDLATCVAIDIESSRLKRIEENLTRLGH
QATLICGDASEPASWWDGQLFDRILLDAPCSATGIIRRHPDIKWLRKSSDIDVLVALQSK
IIDAMWALLKPGGTMLYATCSILPAENQLQINAFLNRTPDALLDDKFDNDAAQKPGRQIL
PGEKQMDGFYYARLLKA

NT seq 1314 nt +upstreamnt +downstreamnt
atgagccaatcaaaaggtagataccagcaaaacttgcgcgccgatgccgcccgtgtgctt
tttcaaatattagagcaaggtatgtcagctagagaatgcttacctgcagcacaacaagat
cataatgaaaaagacaaagcatggttgcaagaaatgacttacggcgtacttcgccagctg
cccttactacagcactggctaagattgttgctcgataagccgttaaagaaaaatgtgaaa
gtggtagagcacctaattatgcttgggttttatcaacttgccttttctcgagtgtcaact
catgccgctgtttctgaatgtgtgaatgcctgcgcgccattaaatgcgatagcaaccaag
ggtttagtaaatgctgttttgcgtaatttcatacgccaagatacggcgcataatttacct
gataatgaacaagttttgagcggacagccaaaatggttctataaaaagctcgttgatgct
taccccgataattacaagaccatactagacgcaatgcaagtaaaagcacctatttggttg
cgcgttaataataagcacaagagtactgatgaatattgtcgacttttagacgacagagat
gtggcctatgagcgtcaagcaacccagcctcaaggtattattttatcaaaagggtgcgac
atcaccactctgccaggttatgacgaaggttggtttgcggtgcaagatggcgcagcacaa
ttagccgctgggctgctaggctcacaacctaatgatcgcgtattagactgttgtgcggcg
ccgggaggcaaaacgtgtcacataattgagctacagcccgatttagccacatgcgtagca
atagatatagaaagcagccgccttaaacgcatcgaagaaaacttaactcgcttagggcat
caagcgacactcatttgcggtgacgccagcgagccagcatcatggtgggacggccagtta
ttcgaccgcatattgctagatgcgccttgctcagccacgggtattattcgccgccatcca
gatataaagtggttgcgtaaatccagcgacattgacgtacttgtcgcgttacaaagcaaa
ataattgatgcaatgtgggcgttgttaaagcctggtggaactatgctttacgcaacgtgt
tcaattcttccagcggagaaccagttgcaaattaatgcgtttttaaatcgtacgcctgat
gcgctgttagacgataaatttgataacgacgcagcacaaaagccaggaagacagatttta
cctggtgaaaaacaaatggacggtttctattacgctcgactgctaaaagcctaa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (10)   

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