KEGG   Phragmites australis (common reed): 133904706
Entry
133904706         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133904706
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133904706
Spliceosome [BR:paua03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    133904706
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    133904706
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 133904706
NCBI-ProteinID: XP_062202179
Position
22:9014735..9021947
AA seq 788 aa
MAASASPAASPPRHRRHNHRDEDSPRRRKLRSSPSPPRSPSPDADRRRRSRASPPDPNRR
RGRDANPSENNGHANPGRDADDDGPPRRARVSDGEEDGDRGRRRARVSDDENEDGRRRRR
ARASDDDRDDRRGKRDRERDSRRHRRRSPSSESGSSPDDRRSRRHRRDESSRRRDDRRRR
EDGRDERQRRSREKREPTPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMMREVEDKASPEY
QRLSWDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMASPGFTDV
FAALVAVVNTKFPEIGRMLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVAHELVA
LELLTVLLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGILHEGEIDKRVQF
LIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDELDPETNLNVFRANPNFIED
EKAYENLKSSILGAESSNEEEGSDAASDDEDDEESDEEEDEEQMEIRDRTETNLVNLRRT
IYLTIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMIN
KVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSS
SRIFIKILFQELSEHLGIRLLNERLNDPSMQGSFESIFPRDHPKNTRFSINFFTSIGLGG
ITESLREYLKNMPRLIMQQQKPASSESESGGSESGSESSGGSSSESESESESSYDESDKR
RSKRRKRT
NT seq 2367 nt   +upstreamnt  +downstreamnt
atggccgcctccgcctcgcccgccgcctccccgccgcgccaccgccgccacaaccaccgc
gacgaagactccccgcgccgccgcaagctccgctcgtccccatccccaccccgctcgcca
tcccccgacgccgaccgccgtcgcagatctagggcttccccgcccgaccccaaccgccgc
cgcggacgcgacgccaatccctctgagaacaacggccacgccaaccccggcagggacgcc
gacgacgacggcccgccccggcgcgctagggtctcggatggggaggaggatggcgaccgt
gggaggaggcgcgctagggtttccgacgacgagaacgaggacggccgccggcggaggcgg
gctagggcatcggatgatgatagagacgaccgccgcggcaagcgcgaccgggagagggac
agccgtcgccaccgccgccggagtcccagctccgagtcgggatcctcccctgacgaccgc
cgcagccgtcgccaccgccgtgatgagagctcgaggcggcgggatgaccgcaggcgccgg
gaggacggccgagacgagcgccagaggagaagccgtgagaagagggagcccacgccgctg
cccccgccgccaccattgctgccggagatgatccctgggcgcacgggtgggatctacatc
ccgcccttccgcatggcgcagatgatgcgggaggtggaggacaaggcgagccccgagtac
cagcggctcagctgggatgctctcaagaagagcatcaacgggctggtaaacaaggtgaat
gcgaccaatatcaagaatatagtgccggaactcttcgctgagaaccttgttcgtgggcgg
gggctcttctgccaatcgtgcatcaaatcacagatggcctcacctgggttcactgatgtg
tttgctgcacttgttgcggttgtgaataccaagttccctgagattggacgcatgcttctt
gttcgtgttgtgctccagctgaagagggcatataagcgaaatgacaagccccaattgctt
gcagctaccaagttcattgcacacttagttaatcaggtggtggcgcatgagctcgtagcg
ttggagcttcttacagtacttcttgagaatccaactgatgatagtgttgaggtggcagtc
ggattcgttaaagaatgtggggcaatgctgcaggacttgtctccacaagggcttcatgct
atttttgaaagatttcgaggcatacttcatgaaggtgaaatagacaagcgtgtgcagttc
ctaatagaaggcctttttgcaattagaaaggctaaatttcagggattcccagccatccgt
ccagagttggatcttgtggagcaggaagaccaatttactcacgagatatcccttgaagat
gagctagatcctgagaccaatctaaatgttttcagggcgaacccaaatttcattgaagat
gagaaggcctacgagaacctgaagagtagcattctgggagcagaatcttctaatgaagaa
gaaggatctgatgctgcatctgatgatgaggacgacgaagaatctgatgaagaagaggat
gaagaacagatggagataagggatagaactgagaccaatctcgtgaatcttagaagaaca
atatatttgactattatgtctagtgttgattttgaagaagccggtcacaagcttatgaaa
attaaacttgagcctggtcaagagatggagctgtgtattatgcttcttgaatgttgcagt
caagagagaacataccttcggtattatgggttgctagggcagcggttttgcatgatcaat
aaagtgtaccaagagaactttgaaaagtgttttgtgcaacagtattcgatgattcatcgt
cttgaaacaaataagttgaggaatgttgccaagttttttgcgcatttgttggggactgat
gcactcccttggcatgttttggcttacatccggttgacagaggaagatacgacgtcatct
tctcgaatttttataaaaattctatttcaggaattatcggaacatcttggcatacgctta
ctcaacgagagactgaatgatcctagtatgcaaggttccttcgagtcaatcttcccaagg
gatcatccgaagaatactaggttctctatcaatttcttcacatccatcggtcttgggggt
atcacagagagcctgagggagtacttgaagaacatgccacgcctcataatgcagcagcag
aagcctgcatcatctgagtcagaatctggtggatctgaatctggttcagaaagctctggc
gggtctagttctgagtctgagtccgagtcagaatcaagctatgatgagagtgacaagaga
cggagtaagagaaggaagaggacttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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