KEGG   Paenarthrobacter sp. YJN-5: HMI59_11055
Entry
HMI59_11055       CDS       T10115                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
payj  Paenarthrobacter sp. YJN-5
Pathway
payj00521  Streptomycin biosynthesis
payj00523  Polyketide sugar unit biosynthesis
payj00525  Acarbose and validamycin biosynthesis
payj00541  Biosynthesis of various nucleotide sugars
payj01100  Metabolic pathways
payj01110  Biosynthesis of secondary metabolites
payj01250  Biosynthesis of nucleotide sugars
Module
payj_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:payj00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    HMI59_11055 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HMI59_11055 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    HMI59_11055 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HMI59_11055 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    HMI59_11055 (rfbB)
Enzymes [BR:payj01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     HMI59_11055 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD NAD_binding_4 RmlD_sub_bind Polysacc_synt_2 NAD_binding_10 adh_short Sacchrp_dh_NADP KR adh_short_C2
Other DBs
NCBI-ProteinID: QOT17083
Position
2314849..2315847
AA seq 332 aa
MQRLLVTGGAGFIGCNFVHYIMGHSSLHVTVLDKLTYAGNRASLAGLPPERFEFVKGDIC
DAALVEKLTGQVDAVVHFAAESHNDNSLEEPRPFVDTNLVGTFTLIEAARKYGTRFHHIS
TDEVYGDLALDDPARFTEESVYRPTSPYSATKAGSDLLVRAWVRSFGLRATISNCSNNYG
PYQHVEKFIPRQITNLLDGIRPRLYGEGRNVRDWIHVEDHSSAVAAILERGRIGETYLIG
ADGELSNRSVVEKLLVQVGQSPDAYDLVTDRPGHDLRYAIDSGKLRRELGWTPRYGDFDA
GLAATVRWYRENEAWWRPKKAETELKYAGQGH
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcagagactccttgtcaccggcggggccgggttcatcggatgcaactttgttcactac
atcatgggccacagcagccttcatgtcaccgtcctggacaaattgacctatgcaggcaac
cgcgcgtcactggcgggtttaccgccggagaggttcgagtttgtcaaaggcgatatctgc
gatgcggccctggtggaaaagctgacggggcaagtggatgccgtagtgcacttcgcggcc
gaatcgcacaacgacaattcactggaggagccgcggccgttcgtggacacgaacctcgtg
ggcactttcacccttatcgaggcggcccgcaaatacggaacgcggtttcaccacatttcc
accgacgaggtctatggcgacctcgccctggatgatcccgcccggttcacggaggagtcc
gtgtaccggcccacgagtccgtactcggccaccaaggcgggatcggacctgctggtcagg
gcctgggtcaggtcgtttgggttgcgggcgaccatcagcaactgctcaaacaattacgga
ccgtatcagcacgtggagaagttcattccgcgccaaatcaccaacctcctggacggcatc
cggccccggctgtacggggaaggccggaatgtgcgggactggatccatgtggaggaccat
tcctcggcagtggcggccatcctcgaacggggcaggatcggtgagacgtacctgatcgga
gcggacggtgagctgtccaaccgttccgtcgtggagaagctgctggttcaggtgggccag
tcccccgatgcctatgacctggtaacggaccgcccggggcatgacctccgttatgccatc
gactcgggcaagctgcgaagggaattggggtggacgccgcgctacggtgacttcgacgcc
gggctggctgccaccgtgcgctggtaccgggagaacgaggcatggtggcggccaaaaaag
gccgaaacggagctcaagtacgcaggacagggccactga

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