KEGG   Pseudomonas brassicacearum DF41: CD58_04590
Entry
CD58_04590        CDS       T03174                                 
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
  KO
K06958  RNase adapter protein RapZ
Organism
pbc  Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbc03019]
    CD58_04590
Messenger RNA biogenesis [BR:pbc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CD58_04590
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_33 AAA_22 AAA_28 CoaE AAA_29 T2SSE SKI RsgA_GTPase FtsK_SpoIIIE nSTAND_NTPase5 ABC_tran AAA_16 Glyco_hydro_31_2nd
Other DBs
NCBI-ProteinID: AHL32206
Position
complement(1065479..1066336)
AA seq 285 aa
MRMIIVSGRSGSGKSTALNVLEDNGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPDLLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSNASRSLAEA
IHDESQLLSPIADLADLKVNTTNLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREQSGLDQPVIDYLAAQPDVEDMYQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQLLQQSLKNVQVRHRDLS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgcatgatcattgtcagtggccgctccggctccggtaaaagcacggcgctcaatgtg
cttgaggacaacggctactattgtatcgataaccttccagccggcctgctgccggagctg
gccgaacgcgccctgatccacactgaactggcgcaaccgctggtggcggtgtccatcgat
gcacgcaacctgccgagccatctgtcacgctttcctgacttgctcgaggaagtacgcagc
cggcatatccagtgcgatgtgctgtatctggatgccgatgaagagacgctgctcaagcgt
ttttccgaaacccgtcgacgccacccgctgagcaacgccagccgctccctggctgaagct
attcatgacgaaagccagctgctgagcccgatcgccgacttggccgacctgaaggtcaac
accacgaacctgaacctgtatcagctacgcgacaccatcaagttgcgcctgctgaaccag
ccggaaccaggcacggcgttcctggtggaatccttcggtttcaagcgtggcatgccggta
gacgccgacctggtgttcgatgtgcgctgcctgcccaacccttattggaaaccggaattg
cgtgagcagtccgggctcgaccagccggtgatcgactacctggccgcccagccggatgtc
gaggacatgtaccaggatatctccagctacctgctcaaatggctgccccgctttgccgcg
agcaaccgtgcctacgtcacgatcgccatcggctgcacgggtggccatcaccgttctgta
tacctgaccgaacgcctgggtcagctcctgcaacaatccctgaagaacgtccaggttcgc
caccgcgacctcagctaa

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