KEGG   Pseudomonas brenneri: QDY63_24670
Entry
QDY63_24670       CDS       T10502                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
pbre  Pseudomonas brenneri
Brite
KEGG Orthology (KO) [BR:pbre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbre03019]
    QDY63_24670 (rapZ)
Messenger RNA biogenesis [BR:pbre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     QDY63_24670 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_28 CoaE AAA_22 AAA_29 AAA_16 FtsK_SpoIIIE T2SSE RsgA_GTPase ABC_tran SKI
Other DBs
NCBI-ProteinID: WJM90520
Position
5350650..5351507
AA seq 285 aa
MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLTRFPELLEEVRAKHIHCDVLYLDADEETLLKRFSETRRRHPLSSPHRSLAEA
IEDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDQSGQDQPVAEYLAAQPDVEEMFQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQVLQKTLKNVQVRHRDLS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgtttgatcatcgtcagcgggcgttccggctcgggtaaaagtactgccctcaacgtg
cttgaggacaatgggttttattgcatcgacaacttgccagcaggcctgctgcccgagttg
gccgaacgcgcactgatccataccgagctggcgcaaccgctggtggctgtatcgatcgac
gcacgcaacctgcccagccacctcacgcgattcccggaactgcttgaagaggtacgcgcc
aagcatatccattgcgacgtgctgtacctggatgccgacgaagaaacgctgctcaagcgt
ttctcggaaacccgccgtcgccacccgctgagcagcccgcaccgttcgctggccgaagcc
atcgaggacgagaccaagctgctggggccaatcattgatttggctgacctcaagatcaac
accaccagcctgaacctttaccaactgcgtgacgccatcaagctgcgcctgctgaaccag
ccggagcccggcacggccttcctggttgaatcctttggcttcaagcggggtatgccggta
gacgccgacctggtgtttgacgtgcgctgcctgcccaatccctactggaagccggaactg
cgcgatcagtctgggcaggaccagccggtggccgagtacctggcagcccaaccggatgtc
gaggagatgttccaggacatctccagttacctgctcaagtggctgccgcgctttgccgcc
agcaaccgggcctatgtcaccatcgccatcggctgtaccggcgggcatcaccgctccgtc
tacctgaccgagcgcctgggccaggtcttgcagaaaaccctcaagaatgtccaggttcgc
caccgcgacctcagctga

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