KEGG T08632: 123708137

Pieris brassicae (large cabbage white): 123708137

Entry

123708137         CDS       T08632

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

pbx Pieris brassicae (large cabbage white)

Brite

KEGG Orthology (KO) [BR:pbx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbx03041]
    123708137
Spliceosome [BR:pbx03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    123708137
Complex C
   U4/U6.U5 tri-SnRNP related factors
    123708137

SSDB

Motif

Pfam:

MA3 MIF4G DUF2379 Cnd1

Other DBs

NCBI-GeneID:

123708137

NCBI-ProteinID:

XP_045514628

Position

4:16524833..16529771

AA seq 1008 aa
MEDSQERKRKKEKSDEYYKERKSRRHSSKSPERHRDRDRDSVRDASRKRRRSRSPKRDER
RNEGKMEAPRKSKTDDMLNTRTGGAYIPPARLRMMQAQITDKASVAYQRLAWEALKKSIH
GHINKINVGNIGIIIKELLKENIVRGRGLLCRSVIQAQAASPTFTNVYAALVAAVNSRFP
NIGELLLKRLVIQFKRGFKRNDKALCISSASFVAHLVNQRVAHEILALELLTLLVETPSD
DSVEVAIAFLKECGQKLTEVSSKGVNAIFEMLRNILHEGQLDKRVQYMIEVMFQVWKDGF
KDHPSVIEELELVPEEEQFTHLLMLDEATDAQDILNVFKFDEKYEDNEQKYKTLSKEILG
SDAESGEEEDGSAESGSDESDDEEDEQKPVTIIDNTETNLVALRRTIYLTINSSLDFEEC
AHKLMKMQLKPGQEIELCHMFLDCCAEQRTYEKFYGLLAQRFCNINRIYVGPFEEIFKDS
YATAHRLDTNRLRNISKFFAHLLFTDSISWEALDCVKLNEEDTTSSSRIYIKILFQELAE
YMGLKKLNDRLRDQTLQEAFLGIFPRDNPKNTRFSINFFTSIGLGGLTDDLREHLKQMPK
NVPVPAEIKVHSDSSSDSSSSSSSSSSDSSSSDSEEDTENGKNKTKKKGSNAPKSNNPDR
NSNKEERWGHDGYFERYGRDEQRSSREGRSKQEEFARPKDVSKRTMDTQRSSNFDIKQKN
SSEKGKTQQKRKECANKKEMNDFDVRSRSDSEQGVKEHTPTYDSYWNSTSRKKGNDFSKD
RDDEYRHRDQNRRADKDLDKDNYKESEERSEKEQNVNRRDKYEKRNHQKSIVNTSSNEQR
KFDVGNMKSSIKRDKNQEKVLETSSRNTSRPENSSHVDQDIIADKGFHKEKGKTDKNDSY
NRQYKHKRGVQLAQDKESSDDSEDDSRNKKTYGKHNLKPMGDSDDSKSGGTPEEDSDSRN
KRDKYVKNSQEKKKDEPKIGRYWDSYDTEKSRDSQGQSRHKRVIKSRR

NT seq 3027 nt +upstreamnt +downstreamnt
atggaggattcccaagagcgcaaacgtaaaaaggagaaatcggacgagtattacaaagaa
aggaaatcaagaagacatagctctaaatcccccgagagacaccgtgatcgcgatagagat
tctgtaagagatgccagccggaaaagaagacgttcacgatccccaaaaagagatgaaaga
cgcaatgagggtaaaatggaagctcctagaaaatcaaaaacagatgatatgctgaatact
aggactggaggtgcctatattccacccgctcgtctcaggatgatgcaagctcaaatcaca
gataaagcttctgttgcttatcagaggttagcttgggaagctctgaaaaaatctattcac
ggtcatataaacaaaattaatgtaggcaatattggtataattatcaaagaactacttaaa
gaaaacattgtccgtggtcgtggtttgttgtgtcgttcagttattcaagcacaggctgca
tcaccaacatttactaatgtctatgcagccctcgtcgctgctgtcaattcacgatttcct
aacattggggaactattacttaaaagattagtaatacaatttaaacggggctttaaaagg
aatgacaaggcattatgcatatcatcagcttcatttgtagcccatcttgttaatcagagg
gttgcacatgaaattcttgctttggagcttttaacacttcttgttgagactccgtctgat
gattctgtggaagttgctatagcatttttaaaggaatgtggacagaagttaacagaagtc
tcatctaagggtgttaatgctatttttgagatgttaagaaatatattacatgaaggtcaa
ttagataagagggtacagtacatgatagaagttatgtttcaagtttggaaagatggtttt
aaggatcacccttcagttattgaagagctagaattagtacctgaggaagaacagtttact
cacctattaatgctggatgaagctacagatgcgcaggatatcctaaatgtttttaaattc
gatgagaaatatgaagacaatgaacagaaatataagacattgagtaaagagattcttggg
tcggatgctgaatctggtgaagaagaggatggttcagcagaatctggcagtgatgaaagt
gatgacgaagaagatgaacaaaagccggttacaatcatagacaatacagaaaccaatctt
gttgcacttagacgcactatctatttaactattaattcaagtctggacttcgaggaatgt
gcacataaacttatgaaaatgcaactcaaacctggccaagaaattgaactgtgtcacatg
tttctagactgttgtgctgaacagagaacttatgaaaaattttatggtcttctagcacaa
cgattttgtaatatcaatagaatatatgttggcccatttgaagagatattcaaagattca
tatgcaacagctcacagattagataccaatcggcttagaaatataagcaagttttttgct
catctcctattcacagattcaattagctgggaagcattagactgcgtgaaacttaatgaa
gaagatactacaagttcaagtcgtatttatataaaaattctgtttcaagagctagccgag
tatatggggctaaaaaagcttaatgaccggctgagagatcagacacttcaggaagctttc
ctaggaatatttcctagagacaatcctaagaatactagattttccatcaacttttttacc
tctattgggttaggaggtcttacagatgacttaagagaacatcttaagcaaatgcctaag
aatgtaccagtcccagcagaaatcaaggttcatagtgactcaagttcagactccagttcc
agctcttcatcatcttcaagtgattccagctcaagtgattcagaagaagatacagaaaat
ggtaaaaataaaactaaaaaaaaaggtagtaatgctccaaaatctaataatccagacaga
aatagtaataaagaagaaagatggggtcatgatggttattttgaaagatatggaagagat
gaacaaaggagtagcagagagggtagatcaaagcaggaggaatttgcaagacccaaggat
gtatcaaaacgtactatggatacccagagaagtagtaattttgacataaaacaaaagaat
tcttcggaaaagggtaaaacacaacaaaaaagaaaggaatgtgcaaacaaaaaagaaatg
aatgattttgatgtaaggagcagaagtgacagtgaacaaggagtaaaagaacacaccccc
acttatgattcatattggaatagcactagtagaaaaaaaggaaatgattttagtaaagat
cgagatgatgaatatagacacagagatcaaaataggagagctgacaaagatttagataag
gacaattacaaagaatctgaagagagaagtgagaaagagcaaaatgtaaacagaagagat
aagtatgaaaaaagaaatcaccagaaatccattgtaaataccagcagtaatgagcaaaga
aaatttgatgttggtaatatgaaaagcagcattaaaagagataagaatcaagaaaaagtc
cttgaaactagttctcgaaacacaagcagaccagaaaatagcagtcatgttgatcaagac
attattgcagataaaggatttcacaaagagaaaggtaaaactgacaaaaatgattcttat
aataggcaatacaaacataaaaggggtgtccaactggctcaggataaagaaagtagtgat
gattcagaggatgattctagaaataaaaaaacatatggcaaacataatttaaaacccatg
ggagattcagatgacagtaagagtggtggaacccctgaagaagattctgattcaagaaat
aaaagagataaatatgtgaaaaattcacaagaaaagaaaaaggatgaacccaaaatagga
agatattgggacagttatgacacagaaaagtcaagagacagccagggacaatcaagacat
aaaagggtaataaaaagtagacgatga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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