KEGG   Syntrophotalea carbinolica: Pcar_1935
Entry
Pcar_1935         CDS       T00285                                 
Name
(GenBank) P-loop-containing kinase UPF0042
  KO
K06958  RNase adapter protein RapZ
Organism
pca  Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:pca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pca03019]
    Pcar_1935
Messenger RNA biogenesis [BR:pca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Pcar_1935
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_18 AAA_33 AAA_22 AAA_28 nSTAND3 AAA APS_kinase AAA_16 AAA_24 KTI12 Zeta_toxin CoaE AAA_30 ABC_tran AAA_29 AAA_23
Other DBs
NCBI-ProteinID: ABA89176
UniProt: Q3A381
Position
complement(2250191..2251057)
AA seq 288 aa
MKRARLIIITGLSGSGKTTAARALEDEGFFVVDNLPLVLLPEFLKLHAGSAVAGSNVAVV
VDVRNKPYLEGYKQTLAEVRSAGHVVDIFFFDAVDDVLLRRYSETRRRHPLSQKEGVAES
IRQERALLGGIMDLSTEIIDSSWLTPHQLRARVVHMVCGDDKGNPLAVLVQSFGYRYGIP
QGSDLVMDVRFLPNPHFVPDLRPQTGLSQGVRDFVLGQPACREFLDRFNHLLDYLLPSYR
KEGKSYLTISIGCTGGRHRSVAIAEHLRYAIQGEDMVVDGLHRDVAKE
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaacgtgcacgtctgattatcatcaccgggttgtccggatccggtaaaaccacagcg
gccagggctcttgaagacgagggtttttttgttgtcgataacctgccgctggttctgctg
cctgaattcctgaagttgcatgccggcagcgccgtcgccggctccaatgtggccgtcgtc
gtcgacgttcgcaataagccgtatctggagggatataaacagaccctcgccgaggtacgt
tcggcgggccacgttgtcgatattttcttcttcgacgccgttgacgatgtccttctgcgg
cgctattcggaaacgcggcgtcgccacccactttcgcaaaaagagggcgtcgccgaatcg
atccgccaggaacgcgccctgcttggcggcattatggatctctccaccgaaattatcgat
tcgtcctggctcacccctcatcaattacgggccagggtggttcatatggtatgcggcgat
gacaagggaaaccctcttgccgtactggtgcagtctttcgggtaccgttacgggattccg
caaggatccgaccttgtcatggatgtgcgtttcctgcccaatccgcatttcgtgccggat
ttgcgtccgcagacagggctttcccaaggtgtccgcgattttgttttgggacagcctgca
tgtcgggaatttttggatcgtttcaatcatctgctcgattatcttttgccctcttaccgc
aaagagggcaaaagctatttaaccatttccatcggctgtacgggtggtcgccatcgtagc
gtcgctattgccgaacatctgcggtatgcgattcagggtgaagatatggtggtggacgga
ttgcaccgcgatgttgccaaggagtag

  All links  
Gene (7)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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