KEGG   Physeter macrocephalus (sperm whale): 102980098
Entry
102980098         CDS       T06011                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102980098 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcad03400]
    102980098 (APTX)
Enzymes [BR:pcad01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     102980098 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     102980098 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     102980098 (APTX)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102980098 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102980098 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N Glycoamylase DUF7407 MARCKS
Other DBs
NCBI-GeneID: 102980098
NCBI-ProteinID: XP_007116245
Ensembl: ENSPCTG00005001493
UniProt: A0A2Y9F6U8
Position
9:complement(73516118..73595447)
AA seq 366 aa
MQTSDSGSTKQVYNIHVELMWSRVMMRVCWLVRQDNRHQRIKLPHLEAVMVGRGPETKIT
DKKCSRQQVQLKAECNKGYVKVKQVGVNPTSVDSLIIGKDKEVKLQPGQVLHLVNELYPY
IIEFEEETKNPGLETHKKRKRSGNSDSVERDAAQEAEPSTRLESGSNPSQCSVPPKKEKD
ASTKKESMGHWSQGLKISMEDPKMQVYKDEQVVVIKDKYPKARHHWLVLPWASISSLKAV
TGEHLELLRHMHTVGEKVIADFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNK
KHWNSFNTEYFLESQAVIEMVQEAGRVTVQDGMCELLKLPLCCHECQQLLPSIPQLKAHL
RKHWPK
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcagaccagtgatagcggttcaacaaagcaagtatataatatccatgtggaattaatg
tggtccagagtaatgatgcgggtgtgctggttggtgagacaggacaatcggcaccagcga
atcaaacttccacatttggaagcagtcatggttgggcgcggccccgagaccaagatcact
gacaagaaatgttctcgacagcaagtacagttgaaagcagagtgtaacaaaggatatgtc
aaggtaaagcaggtaggggtcaatcccaccagtgttgactcactcataattgggaaagac
aaagaggtgaagctgcagcctggccaggtcctccacctggtgaatgaactttatccatat
atcatagagtttgaggaagagacaaagaaccctggcctggaaacacacaagaagagaaag
aggtcaggcaacagtgattctgtagaaagggatgctgcccaggaagctgagcccagtaca
agactagaatctgggagcaacccgagccagtgctctgtgcccccaaagaaggagaaagat
gcatccaccaaaaaggaatcaatgggccattggagtcaaggcttgaagatttcaatggag
gaccccaaaatgcaggtttacaaagatgagcaggtggtggtgattaaggataaatacccc
aaggctcgtcaccactggctggtcttaccatgggcctccatttccagtctgaaggctgtg
accggagaacaccttgagctcctcagacacatgcacactgtgggggaaaaagtgattgca
gactttgctgggtctagcaaactccgcttccgattgggctaccatgccattcccagcatg
agccatgtacaccttcatgtgatcagccaggattttgattctccttgccttaaaaacaaa
aaacactggaattctttcaataccgaatacttcctcgaatcacaagctgtgatcgagatg
gtacaagaggctggcagagtgactgtccaagatgggatgtgtgagctcttgaagctgccc
ctctgttgtcatgagtgccagcagctgctgccttccattcctcagctgaaagcgcatctc
aggaagcactggccaaagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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