KEGG   Phalacrocorax carbo (great cormorant): 104041156
Entry
104041156         CDS       T08596                                 
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao04510  Focal adhesion
pcao04520  Adherens junction
pcao04530  Tight junction
pcao04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104041156
   04520 Adherens junction
    104041156
   04530 Tight junction
    104041156
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104041156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcao04131]
    104041156
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pcao04812]
    104041156
   04147 Exosome [BR:pcao04147]
    104041156
Membrane trafficking [BR:pcao04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    104041156
Cytoskeleton proteins [BR:pcao04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     104041156
Exosome [BR:pcao04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104041156
  Exosomal proteins of colorectal cancer cells
   104041156
  Exosomal proteins of bladder cancer cells
   104041156
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI Uds1 FAZ1_C U3_assoc_6
Other DBs
NCBI-GeneID: 104041156
NCBI-ProteinID: XP_009498679
Position
Unknown
AA seq 830 aa
MRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEET
SAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTN
LNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICK
VLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHK
PPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLN
EIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDL
AAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLL
ETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKE
RQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHAR
QQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYKPK
IDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGIS
QEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDAQKKTGMMDCEDFRACLIS
MGYNMGEAEFSRIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNY
ITVDELRRELPPDQAEYCIARMAPYNGGDAVPGALDYMSFSTALYGESDL
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgcgagtgcacaaaatatccaatgtgaacaaggccttggatttcattgccagcaaagga
gtcaaactagtatctattggagcagaagaaatcgtggatggcaatgttaaaatgactctt
ggaatgatctggaccatcatccttcgttttgccattcaggatatctcagttgaagagaca
tctgctaaagaaggacttttgttatggtgtcagaggaagacagccccttacaaaaatgta
aacatccagaacttccatatcagttggaaggacggccttggtttctgcgctttaattcat
agacaccgtccagagctcatcgactacgggaagctacgaaaggatgatcctctcactaat
ctaaacacagcttttgatgtggctgagaaatatctggatattcccaagatgctggatgca
gaagacattgttggaactgcccgtcctgacgagaaagccatcatgacctatgtttctagc
ttctaccacgccttctcaggagcccagaaggcggagacagcagcaaatcgtatctgcaag
gtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaaaaactggccagt
gatctgctggagtggattcgtcgcaccatcccctggctggagaaccgggctccagagaac
accatgcaagccatgcagcagaaactggaggacttccgggactaccgccgcctgcacaag
ccccccaaggtccaagagaagtgccaactcgagatcaatttcaacaccttgcagaccaag
ctgcggctcagcaacaggccagccttcatgccttcagaagggaaaatggtctcggatata
aacaatgcctggggtggcctagagcaggctgagaagggctatgaggagtggttgttgaat
gagatccggaggctagagaggctggatcacctggcagagaagttccggcagaaggcatcc
attcatgagtcctggacagatggtaaggaagcaatgctgcagcagaaggattacgaaact
gctaccctctcagagataaaggccctgctgaagaaacatgaggcctttgagagtgacctg
gctgcacaccaggaccgcgtggaacagattgctgctattgcacaagagctgaatgagctg
gactattacgactctcccagtgtcaatgccaggtgccagaagatctgtgatcagtgggat
aatctaggtgccctaacccagaaacgtcgagaagccttggagaggacagagaagctactg
gaaacgattgaccagttgtacctggaatatgccaaacgagctgcccctttcaataactgg
atggaaggggccatggaggacctgcaggacacattcattgttcacaccattgaggagatc
cagggattgaccacagcccatgaacagttcaaagccactttgccagatgccgacaaggag
agacaggccatcctgggaatccacaatgaagtctcaaagattgtccagacataccatgtc
aacatggcaggaacaaatccttacactacaatcaccccgcaggagatcaatggcaaatgg
gaacacgtgcggcaactggttcccagacgggatcaagccctgatggaagaacatgctcgc
cagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggcaaatgtcattggaccc
tggatccagaccaagatggaggagattggccgcatttccatagagatgcatgggaccttg
gaggaccagctcagccacttgcggcagtatgagaaaagcattgtgaattacaaaccaaag
attgaccagttggaaggagaccaccaacagatccaggaagcacttatctttgacaacaag
cacaccaactacaccatggagcatatccgagtgggctgggaacagttactaacaacaatt
gctaggaccatcaacgaagtggaaaaccagattctgacccgtgatgccaaaggaatcagc
caggaacagatgaatgagttccgggcttctttcaaccattttgacagggaccactccggc
acacttggccctgaggaattcaaagcctgtctcatcagcttgggttacgatattggaaac
gatgcacagaagaagactggtatgatggattgtgaagatttccgagcctgccttatctcc
atgggttacaatatgggagaggcagagttttcccgcatcatgagcatcgtcgaccctaac
cgcttgggtgtagtgacgttccaggccttcatcgacttcatgtcccgggagacagcagat
acagataccgctgaccaggttatggcttccttcaagatcctggctggagataagaactac
atcactgtggatgaattacggcgggaactgcctcctgatcaggctgaatattgcattgct
agaatggcaccctacaacggcggtgatgctgtacctggtgccctggactacatgtccttc
tccacggcactctacggcgaaagtgacctttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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