KEGG   Penaeus chinensis (fleshy prawn): 125043520
Entry
125043520         CDS       T08118                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
pchn  Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchn03041]
    125043520
Spliceosome [BR:pchn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    125043520
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    125043520
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 125043520
NCBI-ProteinID: XP_047495646
Position
1:complement(18963154..18976128)
AA seq 1723 aa
MGRRSRSHSPVKGRSERQRRSRDRDRQDRHRYERDRDRKYSRGSGSRRSASKDRHVRERE
RDRGRHGRRDSPSREQRYSHRGKAERWGRNRDRDHSSDDDHQSREHHRGRDSDRARADDK
SRERHRRYPSDHDREQRLKDRSVDEDEDGNESHSRRRASDSSSDRDAERVHKKGERHNSR
LSHSDRRQERRERKSSTEESDSGSEEEPEVSCVKVKVEPDSDDSSKNQSKKQFPGQQKEK
LRDSPVGRGSESEKREVIASRKESAPEIKIIKKEKSDDRDRNSEPLQKDSDRDIKQKLDK
EKHEGRKKRTDSNEKGAESSDKDAHLDKGHTKLQDIPKESHSEKERKSRRKQNSSSESRS
EDSEDENSEEEEIKKGKENNEKSDSGSDSPVHKKKVDIREKHVERKGKSSDDDLHSREQL
QEKRAEGSRIDKSDNEARARKEVQEKGNEEPQQQERSSNVKNKGDESSEDSSSSESDHKE
KHKKRLEKKAGRMSDDEKRTKERVEKKDSKQSDSEKESSAKARRTRKSDTDSDSEGSSEG
SQKNVRKQRKVKKKKHSEKRSRKKTGFSSQSSSSDECDKEVRKSASPSIYDSNDETTEQE
LLRKKKQLEEQLKIEEEIRIRSENLEKEREAARAMKHKAMKQMENDSDIEEDSQKKKSKS
KNKKSRSRSRSLSRSQSASSHDLKADDKRESKSKKSRSGKQAKHHSSDEDGSENDRSRQS
RGRESEEPQIGGRYWGGEHSAETTRQMKAKQTKSSDTYWNKYADKLGIQIENPRYKDHGS
ERGRDKESGRRREEWSSSSDRKRRANSEDDERRDSKKRKDVMDGDNRENTSDPPAKPLIQ
KPVVDPLTLKTGGAYIPPAKLKMMQAQITDKSTVLFQRLAWEALKKSINGLVNKVNVSNI
GIIVRELLQENIIRGRGILCRALMQAQSFSPTFTHVYSAMVSIINSKFPQIGELLLKRLV
IQLRRGVRRNDKNICTSSCRFIAHLINQQVAHEVVALEILTLLLEKAKDLSDESEVGDKS
RNNSCELAILFLTECGMKLSEVTPRGMNIIFETLRHILHEGKLEQRVTYMIEVIFAVRKD
GFKDHPSVPEELDLVEEDDQYTHIVELDGKMEGEDILNVFKHDPEYEENEEKYKEIRTGI
LGDGSDDSSSEGGSDSGSDSDDEESDDEEEKAEAQIIIDQTETNMVAFRRTVYLTIQSSL
DVDECAHKLLKGEIKPGWESELCNMILDCCAQQRTYIKFYGLLAQRFCLISKVYQEPFQQ
IFKEVYDTCHRLETEKLRNVARLFAHLLFSDAISWEVLNHVHLNEDETTSSSRVFVKILF
QELAEFMSLAKLNERLRDPTLAAAFEGLLPRDNPRNTRFAINFFTSCGLGGLTDDLREFL
RTQPKPTAVVAPVQQQLAKNEDNDSSDSSSSSSSSSSSSDSSSSSSSSSSESSSSDSSDS
SSSDSDDSSNSEEEKKKKKKSKNKKKDSKKKGSSSEKKKSKKIKKGDRQESGEGSKRKPE
SDDETFARRRENEYEEQKERDRTERWKNINAEDSRRRRRHDSSESEGRQSPSQREERRRT
HVHDSTERRHRPREDDYGSERERRPSTENSRGDGRRQGREGHDRSDRKRENDLENRDRDR
HSSEDRHERKKRRDESSDKEKKKKHEKDEREHKKRKKEEDREERWTQRDNRRGSDGGDRR
ERSGWREEGRDRDSYRSREGDHRKDHHSESSDGKRGREKNRYH
NT seq 5172 nt   +upstreamnt  +downstreamnt
atgggtcgtcgcagccgctcacattctcccgtaaagggacgcagtgaaagacagcggaga
agccgtgatagggatagacaagatcgacatagatatgaaagagacagagacaggaaatac
agcagaggcagtggaagcagaaggagtgcaagcaaggaccgacatgtacgagagagggag
agggacagagggcgtcatggaaggagagatagccctagtagggagcagaggtactctcac
agggggaaagctgagagatggggaaggaaccgagaccgtgaccatagctctgatgatgac
catcaaagcagggagcaccacaggggtcgagatagtgatagggccagggctgatgataag
agcagagagagacaccggagatatccatcagatcatgacagggaacagagattaaaggac
agaagtgttgatgaggatgaagatgggaatgagagccacagcaggaggagagcaagtgac
agcagttcagacagagatgcagaaagggttcacaaaaaaggagaaagacataattcaaga
ctaagtcactcagacaggcgtcaagagagaagggaaaggaaaagttcaacagaggaaagt
gattctggttctgaagaagaacctgaggtaagttgtgtgaaggtcaaggtagaaccagac
agtgatgactcttccaaaaatcagagcaagaaacagttcccaggacaacagaaggaaaaa
ttaagagactcgccagttggtagaggaagtgaaagtgagaaaagagaggtaatagcttct
agaaaggagtcagctcctgagatcaaaatcatcaaaaaagagaaatctgatgacagagat
agaaattcagaacccttacagaaggattcggacagagatattaagcaaaaattagataaa
gaaaagcatgaaggaagaaagaaaagaacagattctaatgaaaaaggtgctgaaagcagt
gataaagatgcacatctggataagggacacacaaagctacaggacattcctaaagagtca
cattcagagaaagaaaggaaatcaaggaggaagcagaactctagttcagaatcaagatct
gaggattctgaagatgagaactccgaggaggaagaaattaagaaagggaaggagaacaat
gaaaagtctgattctggaagtgattcccctgtgcataagaaaaaggttgatattcgtgaa
aagcatgtagaaaggaaaggaaagtcctcggatgatgacttgcattctcgtgagcaacta
caggaaaaaagagctgagggaagtagaattgacaagtcagataatgaagccagagcaaga
aaagaggttcaagagaaaggaaatgaagaaccacaacagcaagaaaggtcaagtaacgta
aagaataaaggtgatgaaagtagtgaagacagtagcagcagtgaatcagaccacaaggaa
aaacacaagaaacgtttggaaaagaaagctggaagaatgtcagatgatgaaaagagaacc
aaggaaagagtcgaaaagaaagacagcaagcagtctgattcagagaaagaaagttctgcc
aaggccagaagaaccagaaaatcagacacagactctgattcagagggaagctctgaaggt
tcacagaaaaatgtaaggaaacagaggaaagtcaagaagaaaaagcattcagagaagaga
tcaagaaaaaaaacaggtttctcatctcaatcatcatccagtgatgaatgtgacaaagaa
gtaagaaaatctgcttctccaagcatttatgacagtaatgacgaaaccacagaacaagaa
ctgttaaggaagaagaaacagctagaagagcagttgaagatagaggaagaaatcagaata
agaagtgagaatttagagaaggaaagggaagcagctcgggccatgaaacataaagcaatg
aaacaaatggagaatgactcggacattgaggaagacagtcagaagaagaagagcaagagt
aagaataagaagtcacgttcacgttcacgttcactttctcgttctcagtctgcctcaagt
catgacctaaaggcagatgataaacgggaaagtaaaagtaagaagagcagatcaggcaaa
caagcaaaacatcatagttcagatgaagatggcagtgaaaatgacagaagtcgacaatca
agaggcagggaatcagaggaaccacagattggtgggcgatattggggaggagaacacagt
gcagaaacaaccaggcagatgaaggcaaagcagactaaatcaagtgatacatattggaat
aaatatgccgataaattaggtattcaaattgaaaatccaagatataaggatcatggctca
gaaagaggtagagataaggagagtggcaggaggagggaagaatggagtagtagcagtgat
aggaaacggagagctaacagtgaagatgatgagagacgggacagcaaaaagagaaaagat
gtgatggatggtgacaacagggagaacaccagtgatcctccagccaaacctcttatccag
aaacctgtagtagatcctttgacattaaaaacaggtggggcctacattcctccagccaaa
ttgaagatgatgcaagcccaaattacagacaagagtactgtcctgttccagcgattagcc
tgggaagctttgaagaagtctatcaatggtctggttaacaaagtgaatgtatccaatatt
ggtatcattgtgagagagcttttacaggaaaatattatcagaggaaggggaatattgtgc
cgagccctcatgcaagctcagtctttttctcctaccttcacacatgtatatagtgcaatg
gtttcaattatcaattcaaaatttccccagattggtgaattgttattgaaacgacttgtc
attcaactgcgtagaggtgttaggagaaatgacaagaatatttgtacgtcctcttgtagg
tttattgcccatttgataaaccagcaagtggctcatgaagttgttgctcttgaaattctg
actctgctcttagagaaagctaaagacctcagtgatgaatcagaagtaggtgataaatca
agaaataactcctgtgaacttgcaatattgtttctgacagaatgtggcatgaagttaagt
gaagtcacaccaagagggatgaacattatatttgagactctaaggcacattttgcatgag
ggaaaacttgagcagcgtgttacttacatgattgaggtaatttttgcagtacgtaaagat
ggctttaaagatcatccttcagtgccagaagagctagatcttgttgaagaagatgaccag
tatacacacattgtggaactagatgggaagatggaaggtgaagacatactgaatgtcttt
aagcatgatccagaatatgaagaaaatgaggaaaagtataaagaaatcagaacaggcatc
ttgggtgatggtagcgatgatagtagctcagaaggtggatctgatagtggttctgatagt
gatgacgaggaatcagatgatgaagaagaaaaggcagaagcacagataattatcgaccag
acagagaccaacatggttgcattccgtagaactgtgtacttgaccatacagtcttcactg
gatgtagatgaatgtgctcacaagcttctcaaaggagagattaagccaggttgggaaagt
gaactttgtaacatgattttggattgctgtgctcaacagcgaacctacattaagttttat
gggcttttagcacagagattttgcttgattagtaaagtgtaccaagaaccttttcagcag
atattcaaagaagtatatgatacatgccatcgcctggaaactgagaaactgcggaacgtg
gcccgtctctttgctcaccttctgttctccgatgccatatcatgggaagtcctcaaccat
gttcatcttaatgaggatgaaacaacaagctcctccagggtgtttgttaagatcctattt
caggagctagctgagttcatgagtctggccaaattgaatgaaagactacgagatccaact
ttggcagctgcttttgagggcctgttacccagagataacccacgtaacactaggtttgcc
atcaacttctttacatcatgtggtcttggaggcctcacagatgacctgcgcgaattttta
cgcacccagccaaagcctacagctgttgtagctccagtacagcagcaactggcaaagaat
gaggacaatgacagcagtgacagcagcagtagtagcagcagcagcagtagtagcagtgat
agcagcagcagcagtagtagtagtagctctgaaagcagcagctctgatagttcagactct
tcatctagtgactcagatgattcttcaaattcagaagaggaaaagaaaaagaaaaagaaa
agtaagaataagaagaaagattcaaagaagaagggaagcagttcagagaagaaaaagagt
aaaaagataaagaaaggggacagacaagaatctggggaagggagcaaaaggaagccagaa
agtgatgatgaaacatttgccaggagaagggagaatgaatatgaagagcagaaggagcgg
gacaggacagaaagatggaaaaacatcaatgcagaggatagtaggaggaggaggagacac
gatagcagcgagagtgaggggaggcagtcaccaagccagagagaagagaggagaaggacc
catgttcatgacagcacagagaggagacacaggccaagagaggatgactatggttcagag
agagagaggagaccaagtacagagaacagtaggggagatgggaggaggcagggcagagaa
ggccatgacagaagtgaccgaaaacgagaaaatgacttggagaacagggaccgagatagg
cacagcagtgaggacaggcatgagaggaaaaaaaggagagatgaaagcagtgacaaagag
aagaagaaaaaacatgagaaggatgagagggagcacaagaagaggaagaaggaggaggat
agggaagagagatggacacaaagagataacaggagaggaagtgatggcggtgatcgcaga
gagagaagcggatggagagaagagggaagggacagggacagctatcgttctagagaaggg
gaccacagaaaagaccaccattctgaaagtagtgatgggaaacgggggcgggagaagaac
agatatcattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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