KEGG   Psychrobacter cibarius: Q6344_13985
Entry
Q6344_13985       CDS       T09259                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
pcia  Psychrobacter cibarius
Pathway
pcia01501  beta-Lactam resistance
pcia01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:pcia00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Q6344_13985
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Q6344_13985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcia03036]
    Q6344_13985
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcia02000]
    Q6344_13985
   01504 Antimicrobial resistance genes [BR:pcia01504]
    Q6344_13985
Chromosome and associated proteins [BR:pcia03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    Q6344_13985
Transporters [BR:pcia02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Q6344_13985
Antimicrobial resistance genes [BR:pcia01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Q6344_13985
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 Biotin_lipoyl HlyD_2 PTS_EIIA_1 Peptidase_M23
Other DBs
NCBI-ProteinID: WLG13683
Position
complement(3282583..3283911)
AA seq 442 aa
MSDFEHPNNKQAPTSEQETNIEPPQPSELPPYRQSDTLSKKTASKLPLWLLPVLAAVLII
GVLLGKYWGGSDEAATDESPVSSGTSSDGATASATSTEQAVLSVETVSPSQDDIGNTLSA
DGTIDAKDTANVSAKVNGVAIERILVEEGDRVKAGQVLAIFDTDAMEQQVLQAEADVAEA
EATLANASADAARVLPLIDIDAISKQEADRYRTAKLQAQAALQASKARLSTQRLSVDNAT
VVAPVSGVISEKMAEVGMVAGGEPLFTIIKGGILEWRADIDPKLVGEVSVGTPVRVSLPD
GDTVMGKVSRIAPTADNNRQITIYASLAANAKVRAGMYQTGEFLLGSASTQTVPNSAIVS
NDGYDYVMLVTNVTTQDGQTMGRIKQQRVTLGERLGENVAVLEPLPSDSQIVKQGGSFLN
DGDLVRIVDGVSQTSTAAQAQP
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgagtgattttgaacaccctaataataagcaagcaccgactagcgagcaagaaaccaac
attgaaccacctcaaccatctgagctaccaccttatcgccagtctgatacattgtctaaa
aaaaccgcttcaaaattaccattatggttgttacccgtattggcagccgtgcttatcatt
ggtgtgctacttggaaagtattggggcgggagtgatgaagccgcgacggatgaatcgcca
gtttctagtggtacttcaagtgatggtgccactgcaagcgctacgagtactgagcaggcg
gtattatcagtagaaacggtcagcccaagccaagatgatattggtaacacactcagtgct
gatggcaccattgatgccaaagatacggcgaatgtcagtgctaaagtcaatggcgtggct
atcgagcgtatattggtcgaagaaggtgatcgcgtcaaagcgggtcaagtattggcgata
tttgacaccgatgctatggagcagcaagtcttgcaagcagaggcagatgttgccgaagca
gaagcgacgcttgccaatgccagcgctgatgctgctcgtgtattgccattgatagatatt
gatgccattagtaaacaagaagccgatcgctatcgcactgcaaaacttcaagcacaggct
gcgctacaagcctccaaagcgcgtctgagcactcagcgcttgagtgtagataatgcaaca
gtggtcgcaccagtcagcggtgtcatcagcgagaaaatggcggaggtcggtatggttgct
ggtggcgagccattatttactatcattaaaggtggtattttggaatggcgtgcagatatt
gatcccaagcttgtcggtgaagtcagtgtcgggacgccagtacgggtgagcttaccagat
ggtgatacggtaatggggaaagtgagccgcatagcaccaacggcggacaacaaccggcag
attaccatctatgcgagcttggcagccaatgcaaaagtacgggcaggtatgtatcaaacg
ggtgagttcctattaggcagtgccagtacgcaaacggtgcccaatagcgctatcgtcagc
aacgatggctatgattatgtgatgctagtaaccaatgtgaccactcaagatggtcagacc
atgggtcgtatcaagcaacaacgagtgacattgggcgagcgacttggcgaaaatgtggca
gtgctagagccattgcctagtgacagtcaaattgtcaaacaaggcggtagctttttaaat
gatggagatttggtgcgtatcgttgatggtgttagccaaacgagtacagcagcgcaggca
caaccatga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (8)   

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