KEGG   Puma concolor (puma): 112853143
Entry
112853143         CDS       T08890                                 
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
pcoo  Puma concolor (puma)
Pathway
pcoo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcoo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112853143 (PARN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoo03019]
    112853143 (PARN)
Enzymes [BR:pcoo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     112853143 (PARN)
Messenger RNA biogenesis [BR:pcoo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     112853143 (PARN)
SSDB
Motif
Pfam: CAF1 RNA_bind R3H RRM_Thc1 T6PP_C NCBP3 RRM_1
Other DBs
NCBI-GeneID: 112853143
NCBI-ProteinID: XP_025772456
UniProt: A0A6P6HB02
Position
Unknown
AA seq 619 aa
MEIIRSNFKSNLQKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGTLSYVSPSASKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVF
PRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKVESAEGFPSYDTATEQLHEA
GYDAYITGLCFLSMANYLGSFLSPPKIHVSARSKLIEPFFNKLFLMRVMDIPYLNLEGPD
LQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNTSK
YAESYRIQTYADYVGKKHEEKQIKRKWTEDSWKEVERKRLNTQCISYALQNHYPHANSLT
STSTVGKRNLSPSPAEADLETRISGEISDTELEQTESCAESLSEGRKKAKKLKRMKKELS
PAGGLRGSPAKLFEVPDTW
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggagataatcaggagcaattttaagagtaatcttcaaaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
actgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaaacat
tccatggactttttgctgtttcaatttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacgaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcgccagatgtcaagtttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagtttttcgcaatggaattccctatttaaatcaggaagaagaaaga
cagttaagggagcagtatgatgaaaaacgcctacagtccaatggtgcaggaactctgtct
tacgtatctcccagcgcgtcaaaatgtcctgtgacgattcctgaggatcagaagaagttt
attgaccaagtggtagagaaaattgaagatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtactgggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcacgttgagactttagaaactgaaaagaaggagcgatacatcgtc
atcagcaaagtagatgaagaggaacgtaaaaggagggagcagcagaaacacgctaaagaa
cagggaaaactcgtcattggacacaatatgctcttggatgtcatgcacacggttcatcaa
ttctactgccctctgcctgcggacttaaatgagtttaaggagatgacaacatgtgttttc
cccagactcttggatacaaaattgatggccagcacacaaccttttaaggatatcattaac
aacacatctcttgcagaactggaaaagcggttaaaagagacacctttcaaccctcctaaa
gttgaaagtgcagaaggttttccaagttacgacacagctactgagcaactccacgaggca
ggctatgacgcttatatcacagggctgtgcttcctctccatggcgaactacctaggttct
tttcttagccctccaaaaattcatgtgtctgccagatcaaaactcattgaaccttttttt
aacaagttatttcttatgagagtcatggatatcccctatctcaacttggaaggaccagac
ttgcaaccaaaacgtgatcatgttctccatgtgacattccccaaagaatggaaaacgagc
gacctttaccagctttttagtgcctttggtaacattcagatatcctggattgatgacaca
tcagcgtttgtctctctcagccagcccgaacaagtacagattgccgtcaataccagcaaa
tacgcggaaagctatcggatccagacctatgctgactatgtgggaaaaaaacacgaggag
aagcagatcaagagaaagtggacagaagatagttggaaggaggttgagagaaagcggtta
aacactcagtgcatatcctatgctctgcagaatcactatccccacgccaatagtcttacc
tcgaccagcacggtaggaaagagaaatctgagccccagcccagcagaagctgacttggag
accagaatatcaggggagatttctgacactgagctggagcagacagagtcctgtgcagaa
tccctctccgagggaaggaaaaaggccaagaaattaaaaaggatgaagaaggagctttcg
ccagcaggaggcctccggggcagccctgccaagctcttcgaggttcccgacacgtggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system