KEGG   Puma concolor (puma): 112860299
Entry
112860299         CDS       T08890                                 
Symbol
LMO7
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain only protein 7
  KO
K06084  F-box protein 20
Organism
pcoo  Puma concolor (puma)
Pathway
pcoo04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:pcoo00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    112860299 (LMO7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcoo04121]
    112860299 (LMO7)
Ubiquitin system [BR:pcoo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     112860299 (LMO7)
SSDB
Motif
Pfam: DUF4757 CH LIM PDZ PDZ_2 PDZ_6 PAZ_4 Prominin
Other DBs
NCBI-GeneID: 112860299
NCBI-ProteinID: XP_025779363
UniProt: A0A6P6HW39
Position
Unknown
AA seq 1617 aa
MEEAGADCALAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVRQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDSRCLKRSGRDSGYGDIWCAERGDFP
TPPGNHKREDSFESLDSLGSRSFTSCSSDITLRGGREGCESDTDSEFPSKMQDYNKDDMS
YRRISAIEPKSALPFNRFLPNKSRQPSYVPAPLRKKKPDKYEDNRRSWASPVYTEADGTF
PSNERRTWGTNVENWPTVQETSNSSCYLEEKEAKTSTPNTVKDDLYVRKLSPIMPNPGHA
FDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDILSSETNTKID
PTAGPRLITRRKNLFSAPGYKRDDLEMSTLDPDLENDDFFVRKTGAFHANPYVLRAFEDL
RRFSEQDDPVERDIILQCREGELVLPDLERDDMVVRRLPAQKKEVPLSGAPDRYQPVPFP
EPWTLPPEIQAKFLCVLERTRPSKEKRKSCRVLVPSYRQKKDDLLTRKIQSWQLGTTVPP
VSFIPGPCSEADLQRWEAIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSADDVQNL
RQLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSER
SSKTFKEMLQDRESRNQTSAVVSRRRLHSSDDILHEEKLSPRLTTSEASYQSERVEEKET
TYSAEVPKQDSTTFAKREDAAVAEIQLSSQNPMEEQHPDALSSQHSPSTQTESTRISASL
PRSYQKTDTARLTSVVTPRPFGSQARGISSLXXXFXMDDGWKYNGDVEYVKRTQSSLVST
SVHKPDTSQLATSKSSEREGVAVGEGVMQLPSPTPSFSSLSQEEAATSKATLSSPSVPDL
MSELGEGGSSPQTDVSRSSQDQFSDMRISIHQTPGSGLDFGFTVKWVFSGIFVASIEAGS
PAEFSQLQVDDEIIAVNNTKFSYKDTKEWEATMANAQETGNLVMDIRRYGKSGSPETKWI
DTTSGIYNSDKSSNLSVTTDFSESLQHSNTESKEINGIRDESNTFESKASEPISLKNLKR
RSQFFEQGSSDSVVPDLPVPTLSAPSRWAWDQEEERKRQERWQKEQDRLLQEKYQREQEK
LREEWQRAKQEAERENYKYLNEELMVLNSNSISLTAREPAVASWEATWGEGSKSSDREGT
RAGEEERSQQQKEGVDEDQRKKLQEQLTLEKERTPEEPQYQEGQEQKRHPAEAQERKHQA
ERERETSVRIYQYRRPIDSYDLPKREEKSPGLLPSDRNKSRSTTELDDYPTNKNGSSKYL
DRIGSTSSSQRSSKKEQVPSEAELERQQILQEMRKRTSLHNDNSWIRQRSSSVNKEPICL
PGIMRRGESLDNLDSPRSNSWKPSPWLNQSSGVHASSSVQDFSRPPPQLVSTSNRAYMRN
PSSSVPPPSTGSVKTTTAPSPAPRSHSPSASQLGSQLRNRSVSGKRMCSYCNNILGKGAA
MIIESLGLCYHLHCFKCIACERDLGGSSSGAEVRIRNHQLYCNDCYLRYKSGRPTAM
NT seq 4854 nt   +upstreamnt  +downstreamnt
atggaggaggccggggccgactgcgccctggcgttcgccgaggcccagagatgggtggag
gcagtaacagagaagaattttgagacaaaggattttcgagcttctctagagaatggtgtt
ctgttgtgtgatttgattaataaacttaaacctggtgtcattaagaagattaatagactg
tccacaccaatagcaggtttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaaccgagtc
actgtcaggcaagaagagactgataggagagtgaaaaatgttttgataacattgtactgg
ttgggaagaaaagcacaaagtaacccctactataatggaccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggctcttgaagactccaggtgcctgaaa
aggagtggcagggacagtggttacggtgatatctggtgtgctgaacgtggagactttcct
actcctccaggcaaccataagagagaagattcgtttgaaagcttggactctttggggtct
aggtcattcacaagctgctcctctgatatcacgctgagagggggacgtgagggttgcgaa
agcgacacagattctgaatttccatccaagatgcaggattataataaagacgatatgtcc
tatcgaaggatttcagctattgaaccaaaatctgctttaccattcaatcgttttttaccc
aacaaaagtagacagccatcctatgtgccagcgccgttgaggaagaaaaagccggacaaa
tacgaggataacagaagaagttgggcaagcccggtctatacagaagcggatggaacattt
ccaagtaatgagaggagaacttggggtaccaatgtggagaattggccaacagtacaagaa
acttcaaactcctcttgttacttggaagagaaagaagcaaagacaagtacacccaacacc
gtaaaggatgatctttatgtgcgaaagctaagtccaatcatgccaaacccagggcatgct
tttgatcagtttcttcccaaatgttggatcccagaagatgtgaactggaaaagaataaaa
agagaaacttacaaaccatggtataaagaatttcagggattcagtcagtttttattactt
caggccctccaaacatattctgatgacatcttgtcttctgaaacaaataccaaaattgat
cccactgccggccccaggctcataacacgcagaaagaatctcttttctgcaccagggtat
aaaagagatgacctcgagatgtcaaccctagaccctgatttagagaatgatgatttcttt
gtcagaaagactggcgctttccatgcaaatccgtatgttctccgggccttcgaagatctt
agaaggttttctgagcaagatgatcctgtcgagcgagatataattctgcagtgtagagaa
ggtgaacttgtacttccggatctagaaagagatgatatggttgttcgccgacttccagca
cagaaaaaagaggtgcctctgtcaggggccccagacagataccagccagttcctttccct
gaaccctggactcttcctccagaaattcaagccaagtttctgtgtgtacttgaaagaaca
cgcccatccaaagaaaaaagaaagagctgtagagtgttagtgccttcctaccggcagaag
aaagatgacctgttgactcgcaagatccagtcctggcagctggggacgaccgtgcctccc
gtcagcttcatccctggcccctgcagtgaggcagacctgcagaggtgggaagccatccgg
gaggccagcagacttaggcacaagaaacggctcatggtcgagagactctttcaaaagatt
tatggtgagaatgggagcaagtccatgagtgatgtcagcgcagacgatgttcagaacttg
cgtcagctgcgttacgaggagatgcagaaaataaaatcacaattaaaagaacaagatcag
aaatggcaagatgaccttgcaaaatggaaagatcgtcgaaaaagctacacttcagatctg
cagaagaaaaaagaagagagggaagaaattgaaaagcaggcacttgagaagtctgagaga
agctctaagacatttaaggaaatgctgcaggacagggaatcccgaaatcaaacatctgca
gttgtatcaagaaggaggttgcattcttctgatgatatcttgcatgaagaaaagctttcc
cctagactgaccacgtcagaagcaagttaccagagtgaaagagtagaagagaaggaaaca
acatattctgcagaagttcctaagcaagattctacaacttttgcaaaaagagaggacgct
gcagtagctgaaattcagctttcttctcagaaccccatggaagaacaacacccagacgct
ttgtcttctcagcattcaccgagtacacaaaccgagtcgactcgaatttcagcctctctc
cccagaagttaccagaaaactgatacagccaggttaacatctgtggtcacgcctagacct
tttggctctcaggcaaggggaatctcatcactccnnnnnnatttttagatggatgatggc
tggaagtataacggagatgtcgaatatgtgaagagaactcagagcagtttggtcagcacc
tctgtgcacaaacctgacacgagccagcttgctaccagcaagtccagtgagagagaggga
gtagcggtgggagaaggtgtgatgcagctgccctcccctaccccctccttctcatcgctt
tcccaggaagaggctgccacttctaaagccacactgtcttcaccatctgtccctgactta
atgtctgagcttggagaagggggaagctcaccacagacagacgtctccagatcctcacag
gatcagttcagtgatatgagaatcagcatacaccagacgcctgggagcggtcttgacttt
gggtttacagtaaaatgggtgttttctgggatcttcgttgcgtcaattgaagcaggtagc
ccagcagaattttctcagctacaggtagatgatgaaattattgctgttaacaacaccaag
ttttcatataaggacacaaaagagtgggaggcgaccatggctaatgctcaagaaactgga
aacctagtaatggatatcaggcgctatggaaagtctggttcacctgaaacaaagtggatt
gatacaacttctggaatttacaactcagacaaatcttcaaatctgtcagtaacgactgat
ttctcggaaagcctccagcattctaatactgaatccaaggaaataaatggaattcgtgat
gaaagtaatacttttgaatcaaaagcatctgaacctatttctttgaaaaacttaaaaagg
cgatcacaattttttgaacaaggaagctccgattctgtggttcctgatcttccagttcca
accctcagtgccccgagtcgctgggcatgggatcaagaggaggagcggaagcggcaggag
cggtggcagaaggagcaggaccgccttctgcaggaaaaatatcaacgtgagcaggagaaa
ctcagggaagagtggcaaagggctaagcaggaagctgagagagagaattacaagtacttg
aatgaggaactgatggtcctgaactcaaacagcatttctctgactgcacgggagcctgcc
gttgccagctgggaagccacctggggtgaggggtccaagtcctccgaccgggaaggaacc
cgagcaggagaagaggagaggagccagcagcaaaaggagggtgtggacgaggaccagaga
aagaagctgcaggagcaactaactctcgagaaggagaggacaccggaggagccacagtat
caggaagggcaggagcagaagaggcatccggcagaggcccaggagcgcaagcaccaggca
gagagagagagggaaacttcagtcagaatataccagtatagaaggccaattgattcctat
gatctaccaaagagagaggaaaaatccccagggttgcttcctagtgacaggaataaatcc
agatccactactgaactggatgattaccctacaaataaaaatggaagcagtaaatattta
gaccgaattgggagcactagctcatcacagaggagctccaagaaggaacaggtgccgtca
gaagcagagttagagagacagcaaatccttcaagaaatgaggaagagaacatctcttcac
aatgacaacagctggatccgacagcgcagttccagtgtcaacaaggagcccatttgtctg
cctgggattatgagaagaggtgaatctctagataacctggattccccaagatccaattcc
tggaaaccatccccttggctcaatcagtcttcaggagtccatgcttcctcctccgttcaa
gacttcagtcgcccaccacctcagctggtgtccacgtcaaaccgtgcctacatgcggaat
ccatcctccagtgttccccctccttccactggttctgtgaagaccaccaccgcgccttct
cccgcaccacgcagccattctccttcagcatcacagctgggctcccagctacgcaacagg
tcagtcagtgggaagcgcatgtgctcctactgtaataacattctgggcaaaggagccgcc
atgatcatcgagtccctgggtctttgttatcatttgcattgttttaagtgcattgcctgt
gagcgtgacctcggaggctcctcctcaggagctgaagtcagaatcagaaaccaccaactg
tactgcaatgactgctatctcagatacaaatctggacggccaactgccatgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (13)   

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