KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_03245
Entry
JM49_03245        CDS       T03338                                 
Name
(GenBank) cyclic AMP receptor protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02020  Two-component system
pcp02024  Quorum sensing
pcp02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JM49_03245
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JM49_03245
   02025 Biofilm formation - Pseudomonas aeruginosa
    JM49_03245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcp03000]
    JM49_03245
Transcription factors [BR:pcp03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    JM49_03245
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HVO_A0261_N MarR_2 TrmB MarR bAvd HTH_11 HTH_28 RepA_N
Other DBs
NCBI-ProteinID: AIS10723
Position
complement(720002..720646)
AA seq 214 aa
MVALAPTPKIKNLDKLLMHCQRRRYQAKSNIICAGDQSDTLFFIIKGSVTILIEDDDGRE
MIIAYLNAGDFFGELGLFEQAGHEQQRSAWVRAKVECEVAEISYTKFRELSQQDPDILYV
LSGQIAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRI
VGCSREMVGRVLKDLEERNLVHVKGKTMVVFGTR
NT seq 645 nt   +upstreamnt  +downstreamnt
atggttgctcttgcccctacacccaagatcaagaacctcgacaagctgttgatgcactgc
cagcgccgccgttatcaggccaagagcaacatcatctgcgccggcgaccagtcggacacg
ctgttcttcatcatcaaaggctcggtcaccatcctgatcgaagacgatgacggtcgggaa
atgatcatcgcctatctcaatgccggggactttttcggcgagctgggcctgttcgagcag
gccggacatgagcagcaacgcagcgcctgggtacgcgccaaggtcgaatgcgaagtcgcg
gagatcagctatacgaaattccgtgagctgtcccaacaggacccagacattctgtacgtg
ctcagcggccagatcgcccagcgcctgcgcaacaccacccgcaaggtcggcgacttggcg
ttcttcgacgtcaccgggcgcgtggcccgctgcctgctcgaactgtgcaagcagccggat
gccatgacccacccggacggcatgcagatcaaggtgacccgtcaggaaatcgggcgaatc
gtcggctgctcacgggaaatggtcggccgggtgctcaaggacctcgaagaacgcaacctg
gtccatgtcaaaggcaagaccatggtggtgttcggcacccgctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (13)   

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