KEGG   Pseudorca crassidens (false killer whale): 137216193
Entry
137216193         CDS       T12027                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
pcrs  Pseudorca crassidens (false killer whale)
Pathway
pcrs03410  Base excision repair
pcrs05166  Human T-cell leukemia virus 1 infection
pcrs05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pcrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    137216193 (POLB)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    137216193 (POLB)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    137216193 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcrs03400]
    137216193 (POLB)
Enzymes [BR:pcrs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     137216193 (POLB)
DNA repair and recombination proteins [BR:pcrs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     137216193 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     137216193 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 HHH Cdd1 HHH_2 HHH_RS2-RL21-YNQ2 NTP_transf_2
Other DBs
NCBI-GeneID: 137216193
NCBI-ProteinID: XP_067578212
Position
21:complement(5195116..5217087)
AA seq 335 aa
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVEKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaggcgccgcaggagacgctcaacgggggcatcaccgacatgctcaca
gaactcgcaaactttgagaagaacgtgaaccaggctatccacaagtacaatgcctacaga
aaagcagcatctgtgatagcaaagtacccacacaaaataaagagtggagcagaagctaag
aaactgcctggagtaggaacaaaaattgctgaaaagattgatgaatttttagctactgga
aaattgcgtaaactggaaaagattcggcaggatgatacgagttcatccatcaacttcctg
actcgagttagtggcattggtccttctgctgcaaggaagtttgtagatgaaggaattaag
acattagaagatctcagaaaaaatgaagataaattgaaccatcatcagcgaattgggcta
aaatattttgaggactttgagaaaagaattcctcgtgaagagatgttacaaatgcaagat
attgtactaagtgaagttgaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggggcagagtccagtggcgacatggatgttcttcttacccatccaagcttt
acctctgagtcaaccaaacagccaaagctgttacatcgtgttgtggagcagttacaaaag
gtccattttattacagacactctgtcaaaaggggaaacaaagttcatgggtgtttgccag
cttcccagtaaaaatgatgaaaaggaatatccacacaggagaattgatatcaggttgata
cccaaggatcagtattactgtggtgtcctctatttcactgggagtgatattttcaataag
aatatgagagctcatgccctagaaaaaggcttcacaatcaacgaatacacaatccgtccc
ttgggagtcactggagttgctggagagccgctgcccgtggatagtgagaaggacatcttt
gactacatccagtggaaataccgagaacccaaggatcgaagtgaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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