KEGG   Pseudorca crassidens (false killer whale): 137219434
Entry
137219434         CDS       T12027                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pcrs  Pseudorca crassidens (false killer whale)
Pathway
pcrs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    137219434 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcrs03400]
    137219434 (TDP1)
DNA repair and recombination proteins [BR:pcrs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     137219434 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 137219434
NCBI-ProteinID: XP_067584075
Position
1:complement(14595187..14669784)
AA seq 624 aa
MSQEGNYGRWTISSSDESEEEKPRPDEPSTSFLPHAEQGAASEPKYTCSEARKAAHRRKI
APVKFSSTDSVSEASPPKRQKGGSQEDLGWCLSSSEDELPPETQQKQAEDTGVKEEKGLP
SPRDGAVPGAEHHSPSAGHGLETSGEGQDIWDMLGKGNPFQFFLTRVSGIKPKYNSGALH
IRDILSPLFGTLVSSAQIESVCPGGGPGITQAWGGPPWFNYCFDVDWLIKQYPPEFRKKP
ILLVHGDKREAKAHLHAQAKPYENIALCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSN
LIHADWHQKTQGMWLSPLYPRIVHGTHRSGESTTHFKADLISYLMAYNTSLLKEWIDTIQ
EHDLSETNVYLIGSTPGRFQGNQKDNWGHFRLRKILKEHTSSIPKTESWPIVGQFSSVGS
MGADESKWLCSEFKESLVTLGKESRALGSTVPLHLIYPSVENVRTSLEGYPAGGSLPYSI
QTAEKQNWLHSYFHKWSADTSGRSNAMPHIKTYMRPSPDFSQLAWFLVTSANLSKAAWGA
LEKNGAQLMIRSYELGVLFLPSAFGLDSFRVKQKFFSGSQEPTASFPVPYDLPPELYGSK
DRPWIWNIPYVKAPDTHGNMWVPS
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggcaattatgggaggtggacgatatccagtagtgatgaaagtgaggag
gaaaagccaagaccggacgagccatctacctcttttctcccgcacgctgagcagggagca
gccagtgagccaaagtacacctgttccgaggctcggaaagctgcccacaggaggaagatc
gcacccgtgaaattcagcagcacagattccgtttcagaagcttcacctcccaaaaggcag
aagggcggttcccaggaagacctgggctggtgtctctccagcagtgaggatgagctgcca
ccagagacgcagcagaagcaggctgaggacacgggggtcaaagaggagaaaggcctccct
tctcccagagatggtgctgtcccgggagctgagcatcacagcccctcagccggccacggg
cttgaaacgtcaggggaaggccaagacatctgggacatgctgggtaaagggaaccccttc
caatttttcctcactagagtctccggaattaagccaaagtataactcgggagccctccac
atcagggatattttatctcctctatttgggacacttgtttcttcagctcagattgagtca
gtatgtccaggaggaggtccagggattacccaggcctggggaggacccccgtggtttaac
tactgctttgatgtggactggctcataaaacagtatccaccagagttcaggaagaaacca
atcctgctcgtgcatggcgacaaacgcgaagcaaaggctcacctacatgcccaggcaaag
ccttatgaaaacattgccctctgccaggcaaagttggatattgcatttggaacacaccac
acgaaaatgatgctactgctctacgaagagggcctccgggttgtcatacacacctccaac
ctcatccacgccgactggcaccagaaaacacaaggaatgtggttgagccccttgtaccca
cgaatagtccatgggacccacagatctggagaatcaaccacacactttaaagctgacctc
atcagctacctgatggcttataacacctctctcctcaaggagtggatagataccatccag
gagcacgacctctcagaaacaaatgtttaccttattggctcaaccccgggacgctttcaa
ggaaatcaaaaagataattggggacattttaggcttaggaagattctgaaagagcacacc
tcgtccatacctaaaacagagtcctggcctatagtaggtcagttctcaagcgttggctcc
atgggggccgatgaatcaaaatggttgtgttctgagtttaaagagagcttggtgacactg
ggcaaagaaagcagggccctaggaagtactgttcctcttcatctgatctatccttcagtg
gaaaacgtgcggaccagcttagaaggatatccagccgggggctctcttccctatagcatc
cagacggcggagaaacagaattggctccattcctattttcacaaatggtcagctgacacg
tcaggccgcagcaatgccatgccacatattaagacatatatgagaccctctccagacttc
agtcaacttgcgtggttccttgtcacaagcgccaatctgtccaaggccgcctggggagcg
ttagagaagaacggtgcccagttgatgatccgctcctatgagctcggcgtccttttcctt
ccatcagcatttggcctggacagtttcagagtgaaacagaaattcttctcagggagccag
gagccaacagcctcctttcctgtgccgtatgacctgcctccagaactgtatggaagtaaa
gatcggccttggatttggaacattccttatgtcaaagcaccagatacacacgggaacatg
tgggttccctcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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