KEGG T08288: JR316

Psilocybe cubensis (magic mushroom): JR316_0003108

Entry

JR316_0003108     CDS       T08288

Name

(RefSeq) Pre-mRNA-splicing factor CWC22

K13100

pre-mRNA-splicing factor CWC22

Organism

pcub Psilocybe cubensis (magic mushroom)

Brite

KEGG Orthology (KO) [BR:pcub00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcub03041]
    JR316_0003108
Spliceosome [BR:pcub03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    JR316_0003108
Complex C
   U4/U6.U5 tri-SnRNP related factors
    JR316_0003108

SSDB

Motif

Pfam:

MA3 MIF4G HEAT_5MP1_2 CAT

Other DBs

NCBI-GeneID:

71969429

NCBI-ProteinID:

XP_047751263

Position

3:<1011663..>1014740

AA seq 916 aa
MSSPSASDAAAHKRKRSPSQTPEADGAPPSSRRRARSPSEDSGSDSEGPSPPKDGKLEAR
VAAMDLDKAEDEAKSTALVKAAEKEKEKESAQRAEFAKLLNTRSGGVYIPPARLRAMQAA
ASSDKSSPEYQRLSWDALRKSITGIVNRVNVTNIKLIVPELFNENLIRGRGLFARSVMKA
QSASLPFTPVFAALVAIINTKLPQVGELVLTRLISQFRRSFKRNDKSVAHEIIALQILVL
LLERPTDDSIEIATGFTREVGAFLAENSPKANATVFERFRAVLNEGKISTRVQYMIEVLM
QVRKDKYKDNPILPEGLDLVEEDEQITHSIQLEEELQVQEGLNIFKFDPNYLENEEKYKA
IKAEILGEDSDDESGSGSEEESDESDDEVAETKEGIEDRTETNLVNLRRVIYLTIMNALN
YEEAVHKLLKVQLQEGQEIELVNMIIECCSQERSYSTFYGLIGERFSKLNRVWTDSFEQA
FHNYYTTIHRYETNRLRNIARFFGHLFSTDAISWMVFECVKINEDDTTSSSRIFVKIMMQ
EMMESMGLKNLAERFKDPEVKQGCAGMFPMDIPKNTRFSINYFTSIGLGVLTEEMREYLK
NAPKLIMEQRRAMLEAETSSSSDSDSDSDSDSSSDSDSSSDSDSSSDESSSDDSRRGGGR
SRRRDSRSRSRTPPRRRGGRDDSRSRSRSRTRSRTPPRRKSDRSPPPAASRRRGHSSSRS
RSRSRSPPPPRRRGRDEDGSRSPPPPPRRDRGRDRDASPVPPPPRGPNGRDRDRDRDMMD
TKLDGSSRRPRSLSPPPPPRGGGGYGRERDQRDGDRYGRASPPPPPVGGRGGRERSPPPH
MRDDRARDRDGGRRSRSPPPHMSRGGGRDEPRRDGGYRDRPRSPPRHERERERDRDRDGG
RGGPSREQDNGYSRRR

NT seq 2751 nt +upstreamnt +downstreamnt
atgagctccccatctgcctcggatgcagctgctcataaacgaaaaaggtctccctcgcag
accccagaggcggacggtgcgccaccttcaagtcgaagaagagcgaggtctccatctgag
gactcgggatctgactcggaaggaccatcaccacccaaggacggaaagctcgaggcgcgc
gtagcagccatggacctcgacaaggcagaggacgaggccaagtcaacagcgctcgtcaag
gcggcggaaaaagaaaaggaaaaagagtctgctcaaagggcagagtttgcgaagcttctg
aatacccgttctggaggtgtgtatatccccccggcgcggctgcgcgctatgcaagccgcg
gcctcgtccgacaaaagcagccctgaataccagcgtctttcgtgggacgccctccgcaag
tcgattaccggtattgtcaacagggtcaacgtcaccaacatcaagctcattgtcccggaa
ctgttcaacgagaatttaatccgaggacgaggactgttcgcgcgaagtgtgatgaaagct
cagtctgcgagtttgccttttacaccggttttcgcggcacttgtggctatcatcaacacc
aagctgcctcaagttggagagttggttctcactagacttatcagccagtttaggagatcg
ttcaagcgcaatgacaagtctgtcgcacacgaaatcattgcccttcaaattctcgttctc
ctcctcgagcgacctaccgacgactccatcgaaattgccacgggtttcactcgcgaagtt
ggcgctttcctcgctgaaaattctcccaaagcaaatgcaaccgttttcgaacgtttccgt
gctgtgctgaatgaaggcaaaatcagcactcgtgtgcagtacatgatcgaggtcttgatg
caagtcaggaaggataagtacaaggataaccctattctgccggagggactggatttggtt
gaggaggatgagcagattacgcattcgattcagttggaggaggagttgcaagttcaagaa
ggactcaatatcttcaaatttgatcctaattacctcgaaaatgaagaaaaatacaaggct
atcaaagctgagattcttggtgaagattctgacgacgaatcaggatctggttccgaggag
gagtctgatgaatccgatgatgaagtggccgaaacgaaagaaggcatcgaagacagaact
gagaccaacctggtcaatctacgccgtgttatctatcttactatcatgaatgctctcaac
tacgaagaagccgtccacaagctgctcaaagtacagttgcaagaaggacaagaaattgaa
ctcgtcaacatgattatcgagtgttgctcccaggagcgctcgtactcgactttctatggc
ctcatcggcgaacggttcagcaagttgaaccgcgtatggactgactcgttcgaacaggcc
ttccacaactattacactactatccacagatacgagaccaaccgtctgcgaaacatcgcg
cggttctttggacatctgttttcgacggacgcgatttcctggatggtgtttgaatgtgtc
aaaattaacgaggatgacacgacgagcagcagtcgtatctttgtgaagatcatgatgcag
gaaatgatggagagtatggggctcaagaaccttgctgagcggtttaaggaccccgaggtc
aagcagggctgcgcgggcatgttcccgatggatattcccaaaaacaccaggttctcaatc
aattatttcacgagtatcggtttgggtgttttgacagaggagatgagagaatacctcaag
aacgcgcccaagttgatcatggagcaacgtcgtgcgatgcttgaggccgaaacgtcctct
tcttccgactcggattcagattcagattcagactcctcctcagactcagactcctcgtct
gactcggattcatcctccgacgagagctcctcagatgactcgcgcagaggtggaggccgc
agtcgacgccgtgactcgcgctcgcgctcgaggacaccccctcgtcgccggggaggcagg
gacgactcccgctcacgttcccgctcgcgtacgcgttcgcgcactcctccgcgacgcaaa
tcggaccgttcgccgccgcccgctgcgtcgcgccgtcgtggccattctagctcgcggtct
cggtcgcgatcgcgatcgcccccacctcctcgccgtagggggcgcgatgaggatggttcg
aggtcaccgccgccgcctccacgacgagaccggggccgggaccgggatgcgtcgcctgtg
cctcctcccccgcgaggtcccaatggtagggatagagatagggatagggatatgatggac
accaagctggatggctcctctcgtcgtccgcgttcgctctcgcctccacctcccccgcgt
ggtggtggtgggtatggccgtgagcgtgatcagcgagatggagatcgatatggccgagcg
tcgccccctcctcctccagtcggtggcagaggaggtagggagaggtcgcctccaccccat
atgcgggacgatagggccagggatagggatggagggaggcggtcgaggtccccgcctccg
catatgtctcgtggtgggggcagagatgagccgaggcgcgatggtggctatagggaccgt
cctcgatcgcccccgaggcatgaacgcgaacgcgaacgcgatagggatagggatggaggt
agaggcgggccgtctagggaacaggataacggatactctcgcaggcgctag

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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