KEGG   Polynucleobacter duraquae: CL55_00001380
Entry
CL55_00001380     CDS       T04207                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pdq  Polynucleobacter duraquae
Pathway
pdq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CL55_00001380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdq03400]
    CL55_00001380
Enzymes [BR:pdq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CL55_00001380
DNA repair and recombination proteins [BR:pdq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CL55_00001380
 Prokaryotic type
     CL55_00001380
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AKD24471
UniProt: A0A0E3ZIF3
Position
complement(125215..125985)
AA seq 256 aa
MHSFSAADIPEDWRTLLGDYFESPEWQQLQANLRAELNKEFEKIGPEPQNFFKALSLTPL
NQVKVVILGQDPYHSPGLAQGLAFSIPSNIPINSRQFPSSLRNISKALALEGFGALKNGD
LHSWAEQGVLLLNTALSVKLGEAGSHANLGWKSLIDRLISALAQQKPNLVWMLWGGHAQS
KLSLIEAAPDQLILQSSHPSGLGVYKTDRPFLELGAKASCGHFTKANEWLLKLGLKPIIW
VDRNNPNWLDLFSAGN
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcattcattttctgcagctgatattccagaagattggcgcactctactcggagactat
tttgaatcccctgagtggcaacaactccaggctaatctcagggctgagctcaataaagag
ttcgagaagattggtccagagcctcagaatttcttcaaagcactctcgctgactccgctt
aatcaagttaaggtagtcatcttggggcaagatccgtatcactctcctgggctagctcag
ggtttggctttttccataccgagcaatattccgataaattctcgccaatttccgagctcc
ttacgtaatatcagcaaggcgctagcactggaaggttttggcgctcttaagaatggggat
cttcattcttgggctgagcaaggcgttttacttctcaataccgctctcagtgtcaaattg
ggtgaagcaggcagtcacgccaatctgggttggaaatccctcatcgatcgactgataagt
gccttagcgcagcaaaagcccaatctggtttggatgctgtggggaggtcatgcccaatcc
aagttatcccttattgaagcagcaccagatcaattgattctccaatcctcacacccttct
gggctaggggtctataaaacagatcgacccttcctagagcttggtgctaaggcaagttgt
gggcacttcactaaggctaatgagtggttactgaagctgggtctaaagccgatcatctgg
gtagatagaaacaatccaaactggttggacttgttttctgcagggaattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

Download RDF
DBGET integrated database retrieval system