KEGG T07328: 117631384

Prunus dulcis (almond): 117631384

Entry

117631384         CDS       T07328

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

pdul Prunus dulcis (almond)

Brite

KEGG Orthology (KO) [BR:pdul00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdul03041]
    117631384
Spliceosome [BR:pdul03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    117631384
Complex C
   U4/U6.U5 tri-SnRNP related factors
    117631384

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

117631384

NCBI-ProteinID:

XP_034220394

Position

6:complement(1547137..1552980)

AA seq 860 aa
MARNFSSESSEDDVRGDRDKYRSRIDSRSNNLHEPGDEIDSSDSDGGNRTKQQERRDGHR
SDDMDNERSSKRDLKDKGGRWLDDRQDRKGSGESSDEDGELKEKDWDTQPKERKHDNGHR
RRENGKGDRLRESFRSSEEDDEQVRRHRHEREREKPRRHESGHRRPETEDGHRYRSRHSR
HYSDHKDEREEHRTLEQKKDKRDDDQRRRYRNQDDDGDLKYRRNNEVKERREDSRSLRQN
DERDSRMLENSKPQGQSKLQEGNMSTDVSNLGKSGGVYIPPFKLARMMKDVEDKSSVQYQ
RLTWDALRKSINGLVNKVNAANIKNIIPEIFAENLIRGRGLFCRSCMKSQMASPGFTDVF
AALVAVVNTKFPEVGELLLRRIVLQLKRAFKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL
ELLTVLLENPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQYL
IENLFATRKAKFQGHPAVRPELDLVEQEDQLTHELSLEEEIDPEITLDIFKPDPDFLENE
KRYEELKKTILGEESEDEEGSDAVSDGEDDDEDDDDEESEEEDEQQMQIRDETETNLVNL
RRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCVMLLECCSQERTYLRYYGLLGQRFC
MINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDT
TSSSRIFIKILFQELSEHLGIRLLNERLTDPSMQDSYDSIFPKDNPKNTRFAINFFTSIG
LGGITENLREYLKHMPRLIMQQQKAVSDSESESSGSSDSDSESESEPSSSDESDSDSDGR
HKKRRSESDRKERQKKRRRD

NT seq 2583 nt +upstreamnt +downstreamnt
atggctagaaatttcagtagtgaatctagtgaagatgatgtgaggggtgacagagataaa
tatagaagtagaatcgattctaggtcaaacaatcttcatgaacctggtgatgaaattgat
tcatcagattctgatggaggaaatagaacaaaacaacaggagagacgggatggacatcgt
agcgatgatatggacaacgaaaggtccagcaagagggatcttaaagacaaaggtggaagg
tggctggatgatcgtcaagataggaagggatctggagaaagttctgatgaagatggagag
ctgaaagagaaagactgggatactcaaccgaaggaaagaaagcatgataatggccataga
agacgtgaaaatgggaagggtgatagattgagagaatcttttagaagttctgaagaagat
gacgagcaagtaaggaggcaccgacatgaaagggaaagggagaaacctcgccggcatgag
agtgggcatagaaggccagaaaccgaggatggtcatagatataggagccgacattcacgt
cactattcagaccacaaggatgaaagggaagagcacagaacgttagaacagaaaaaggat
aaaagagatgatgatcagagaaggaggtatagaaaccaggatgatgatggagatctaaag
tatcgtagaaataacgaggtaaaagaaagacgagaagacagtcgaagtctgaggcaaaat
gatgagcgagatagcaggatgcttgaaaattcaaaacctcaagggcagtcaaagttgcaa
gaaggcaacatgagtactgatgtgtcaaatttgggaaaaagtggtggagtttacatcccc
ccgtttaagttggcccggatgatgaaagacgttgaagataaaagtagtgttcagtatcag
agattgacatgggatgccctccgaaagagtatcaatggccttgtgaacaaggtcaacgct
gcgaatataaaaaatataattcctgaaatttttgccgagaatctgattcgtggaaggggt
ctcttttgccgttcatgcatgaaatcacagatggcatctccaggtttcactgatgtgttt
gcagcattggttgctgttgtcaacacaaagtttcctgaggttggtgaacttctgttgaga
agaattgtcttacagcttaagagggcatttaaacggaatgacaagcctcaactactagct
gccgttaaatttatagcacatctggtcaaccagcaagtggctcatgagattattgcttta
gaattgctgaccgttttgctggagaaccctaccgatgacagtgttgaagtagctgttggc
tttgtcaccgagtgtggatcaatactgcaggacctttcacctaaagggctccatggcatc
tttgagcgctttcgtggaattcttcatgagggagaaatagacaaaagagtgcaatatttg
attgaaaacttgtttgcaacacgaaaagcaaagtttcaggggcacccagctgttcgtccc
gaactggaccttgtagagcaggaagaccagttgacacatgaactttctcttgaagaggag
atagatccagaaattacccttgatattttcaagcccgatcctgatttccttgagaatgag
aagcgctatgaagaattgaagaaaaccatacttggtgaggagtctgaagatgaagaaggt
tctgatgcagtttcagatggcgaggatgacgacgaggacgatgatgatgaagaatctgag
gaagaggatgagcagcagatgcaaataagagatgagacagagacaaatcttgtaaatctt
cgaagaacaatctatcttacaatcatgtccagtgtagattttgaggaggcgggtcataag
ctcctgaagattaaacttgagcctggtcaagagatggaactatgcgtcatgcttttggaa
tgttgcagtcaggagagaacctacctccgctattatggtctgttggggcagaggttctgt
atgatcaacaaagtccaccaggaaaattttgagaaatgctttgtccagcagtattccatg
atccaccggcttgaaacaaataagctacgtaatgttgcgaagtttttcgcccatttactc
ggcacagatgcccttccctggcacgtgttagcctatatacgattgacggaagaggacact
acttcatcttctcgtatttttatcaagatccttttccaggaattgtcagaacatcttggc
atccgtttattaaatgagcggctcactgatccttcaatgcaggattcttatgattctatt
ttcccaaaggataatcccaagaacactcgttttgccattaattttttcacatccattggg
cttggtggcatcactgagaacctgcgtgagtacttgaagcatatgccacgactcatcatg
caacaacaaaaagcagtgtcagactcagaatctgagagttcaggttcatctgattcggac
tctgagtctgaatcagaaccatcaagctctgatgaaagtgacagtgatagtgacggacgg
cacaagaagcgtaggagtgaaagtgataggaaggaaagacagaagaagcgtaggagagat
taa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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