KEGG   Primulina eburnea: 140810922
Entry
140810922         CDS       T11060                                 
Name
(RefSeq) nuclear poly(A) polymerase 1-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
pebu  Primulina eburnea
Pathway
pebu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140810922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140810922
Enzymes [BR:pebu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     140810922
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     140810922
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2 DNA_pol_B_palm
Other DBs
NCBI-GeneID: 140810922
NCBI-ProteinID: XP_073024946
Position
13:34882320..34889184
AA seq 726 aa
MGSPGSNNLPSGAHIGLSGPISTGGPTEFDVIKTRDLEKFLADAGLYESHEEAIKREEVL
GRLDQIVKTWVKNISRAKGFNEQMVHEANAKIFTFGSYRLGVHSPGADIDTLCVGPKHAT
RNEDFFGELYRMLSEMPDVQELHPVPDAHVPVMKFKFNGVSIDLLYANVSLWVIPEDLDV
SQDSILQNVDDQTVRSLNGCRVTDQILRLVPNIQNFRTALRSMRLWAKRRGVYSNVTGFL
GGINWALLVARICQLYPNALASMLVSRFFRVYNLWRWPNPVMLCPIEEGSLGLSFWDPRR
NYKDRSHLMPIITPAYPCMNSSYNVSNSTLRVMMEEFRRGNEKCETIESNKSSWDALFEP
FAFFEAYKNYLQIDIASETDEDSRNWKGWVESRMRLLTLKIERDTNGVLQCHPHPGEFSD
KSKPFHHSYFMGLRRKLDDTNPQEGKQFDIRMTVEDFKRDVYAYSFWKLTMWIHVRHVKR
KDIPNFVFPCGIRPSHPVKSVNESRSSLSLASNTPQADTAMSRKKRRQDEVAKGVGLSVS
SSMSICSSDATLLDETMSRKQFKPDFDDTLNNPKNSEDISDNHHEIIGLGVSMSFVLPSI
SSVASSDSLAREKPVNSQSSRQTVGQEGSMKIINENVEGMELKGEVQHHGETEETTLLEF
ITEKQDVGAVAAGNIFFSTNQQNGDSEELEPLELTATPTTESPSASVPVQKPLIRFSFTS
LAKAGN
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgggtagcccgggatcgaataatttaccctctggagctcatattggattatctgggcca
atttcaactggtggacccactgaattcgatgtcattaagaccagggacttggaaaagttt
cttgcagatgcgggcttgtatgaaagtcatgaagaagctattaaaagagaggaagtttta
gggagattggaccagattgtgaagacttgggtgaagaatattagtcgtgctaaaggtttt
aatgagcagatggtccatgaggcaaatgcgaaaattttcacgtttggttcttatagactt
ggtgtgcacagccctggtgcagatattgatacattgtgtgttggaccaaaacacgctact
cgaaatgaagacttttttggtgaactttacagaatgttgtcagagatgcctgatgtacaa
gagctgcatcctgtaccagatgctcacgtaccagtcatgaagttcaagttcaacggtgtt
tctatcgatctgctttatgcaaatgtgtctctctgggtcattcccgaagacttggatgtt
tcacaagattctattctacaaaatgtagatgatcagactgttcgtagtctcaatggatgc
agagtgacagatcaaatattgcgtttggtcccaaacattcagaattttcgtactgctttg
cgaagtatgaggctgtgggcaaaacgccgtggagtttattcaaatgtaactggtttcctt
ggtggcattaattgggcattacttgttgcccgaatttgccagctatacccaaatgcactg
gccagcatgctggtctctcggttttttcgggtctataatttgtggcgctggcctaatcct
gttatgttgtgtccaattgaagaaggatctttagggctttctttttgggatcctagaaga
aattataaggacagatcacacctgatgcccataattacgcctgcatatccctgtatgaac
tctagctacaatgtgtcaaatagcacattgcgtgtcatgatggaagagtttcgaagagga
aatgaaaagtgtgagacaattgaatcaaacaagtctagttgggatgctcttttcgaacct
ttcgctttctttgaagcatacaagaattatctacaaatagatatagcgtcagagactgat
gaggactcgaggaattggaaaggttgggttgaatcccgaatgcgcttgcttactttgaag
attgaaagggacacaaatggggtacttcagtgccatccgcaccctggtgaattttcagac
aaatctaagccatttcatcatagttattttatgggcttgcgaaggaaactagatgacact
aaccctcaagaaggcaaacaatttgatataaggatgacggttgaggattttaaaagagat
gtttatgcatactcattctggaagctgacaatgtggattcatgttcgtcatgtgaaacga
aaagacatacccaacttcgtcttcccttgtggaatccgtccttcacatcctgttaaaagt
gtcaatgagagtcgctcatccctatcacttgcatcaaacacacctcaggccgatactgca
atgagccggaagaagagaagacaagatgaagtcgctaaaggagttggcttgtcagtatcc
tcaagcatgtccatatgtagtagtgatgcaactttgttggatgaaactatgtcaagaaaa
caattcaaacctgattttgatgacactctaaataacccgaaaaattctgaggatatatct
gacaaccaccatgagattataggattaggtgtaagcatgtcttttgttttgccatcaatt
tcttctgttgcttcatcagattcattggcaagagagaagcccgtgaactcacaatcttct
cgacaaactgttggtcaagaaggatctatgaaaatcattaatgagaatgtagaaggtatg
gaattgaagggtgaagttcaacatcatggcgagacagaagaaactactttattggagttc
atcacagaaaagcaggatgtaggagcagtggcagctgggaacatttttttctccacgaat
caacaaaatggagactcggaagagctggagccccttgagctgacagcaactcctaccaca
gagtcgccttctgctagcgtgccggtgcagaaacctcttatcaggttcagtttcacttct
ttagcgaaggcaggtaactaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system