KEGG   Psittacula echo (Mauritius parakeet): 308226007
Entry
308226007         CDS       T12082                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
pech  Psittacula echo (Mauritius parakeet)
Pathway
pech04010  MAPK signaling pathway
pech04020  Calcium signaling pathway
pech04510  Focal adhesion
pech04518  Integrin signaling
pech04519  Cadherin signaling
pech04540  Gap junction
pech04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pech00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    308226007 (PDGFRB)
   04020 Calcium signaling pathway
    308226007 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    308226007 (PDGFRB)
   04519 Cadherin signaling
    308226007 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    308226007 (PDGFRB)
   04540 Gap junction
    308226007 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    308226007 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pech01001]
    308226007 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pech04090]
    308226007 (PDGFRB)
Enzymes [BR:pech01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     308226007 (PDGFRB)
Protein kinases [BR:pech01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   308226007 (PDGFRB)
CD molecules [BR:pech04090]
 Proteins
  308226007 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 DUF4452 DUF3944
Other DBs
NCBI-GeneID: 308226007
NCBI-ProteinID: XP_080483419
Position
11:complement(<5960530..>5973512)
AA seq 1093 aa
MVCPSLKTSLWFLILTGLLEVTSGASRLHIEPEDSELVLSLHSTFSLLCYGDGAVLWERE
GQPLTASLEHRDGVFVSNLTLKNVTGRHTGEYSCTYSPEQAPEPVERKAIYIYVPDPSLV
FLPTMTSEELFIFITGYTEAIIPCRVTNPQMQVTLYEKKVENPIPAAYDPQQGFRGFFED
KTYFCRTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENITLMCTVSGNELVNF
NWDYPRKQAGKTVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVHVIERGFVRFHTSLPSTVYAEVHKSRTIQVEVEAYPPPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTGLVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCRDIKWCSTKGQPTRLLGNESAEIGLQTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVHNFLGTSSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSSMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQCYGEKARREAELYGNTPKEDHV
QSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPRLNNARITASSPPSSILYTSVHQNGGENDYI
IPLPDPKPEAICDLPQEASISRASSMLNEANTSSTISCDSPLGLRQDEEQECDPQPGCQE
LTTGHQEVEESFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atggtgtgcccttctctgaagacatctctgtggttcctcatcctcactggtctgctggag
gtaacatccggagccagcagactgcacatcgaacctgaagacagtgagcttgtcctcagc
ctccacagcaccttctccctgttgtgctatggggatggagcagtgctctgggaacgggag
ggtcagcccctcactgcatcactggagcacagggatggtgtctttgtcagcaacctcacc
ctcaagaacgtgacgggccgtcacactggggagtattcatgtacctacagcccggagcag
gctccagagccggtggagaggaaagccatctacatctatgttccagatccctccttagtc
ttccttcccacaatgacctctgaagagctcttcatcttcatcacgggctacactgaggcc
atcatcccatgccgtgtgacaaacccacagatgcaagtgaccctctatgagaagaaggtg
gagaaccccatcccagcagcttatgacccacagcagggattcagaggcttctttgaggat
aagacctacttctgtcggacaattgtggatgaccaggaggtggattcagacaccttctat
gtctacaggatccaggtctcatctgtgaacgtctccatcagcgcagtgcagaccgtagtg
cgccagggagaaaacattaccctgatgtgcaccgtgagcggcaatgagctggtcaacttc
aactgggattatccccgcaagcaggcagggaagaccgtggagcccgtgactgacttcctg
cccggatccacccacgagatccgctccatcctcatcatccagaacgcggagctggaggac
agcgggacctacgtctgcaatgtctctgagggctaccatgagaaaacagaccgcaaggac
atcacggtccatgtgatcgagcgtggctttgtgcgcttccacaccagcctgcccagcact
gtgtacgccgaggtgcacaagagccgcaccatccaggtggaggtggaggcctacccacca
cccagcatcgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacaggtctggtgctggtgcgg
gtgaagcaggaagaaggaggcttttacaccatccgggcttccaatgaggatgatgagcag
gagctgtccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccagtagtggggagcagaccgtgacgtgctctgctgaaggcatgccccagccg
gagatcagctggtctacttgcagagacatcaaatggtgcagcaccaaggggcagcccacc
cggctgctggggaacgagtcggcagagatcgggctgcagaccaacgccacgtaccatgcg
gagctgcaggtctaccgcgtgaacagcaccctgcagctgcacagggtggacgagcccctg
ctcctgcgctgcaccgtgcacaacttcctgggcaccagctcgcaggacatcacgctggtc
ccacacgccttgccgttcaaggtggtcatcatctctgtcattctggccttgctggtcctc
actgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgctatgaaatc
cgctggaaggtgatcgagtccgtcagctctgatgggcatgagtacatctacgtggatccc
atgcagctcccgtatgactccagctgggaggtgcccagggacaagttggtgttaggacgc
actctcggctccggtgcctttggacgtgtggtggaggcaacagcccatggcctgagccat
tcgcagtcctccatgaaagtggcggtcaaaatgctcaagtccactgcccggagcagcgag
aagcaagccctcatgtctgagctgaagatcatgagccacctgggacctcatctcaacatc
gtcaacttgctgggagcctgcaccaaaggaggacccatctatatcatcaccgagtactgc
cgctatggggacctggtggactacctgcaccgcaacaagcacaccttcctgcagtgctat
ggtgagaaggcacggcgagaggcagagctgtacgggaacacccccaaggaggaccacgtg
caaagtcacctctccttgtctgtcgagagtgatgggggctacatggacatgagcaaggat
gactccctggattatgtgcccatgtctgacatgaagggtgaagtcaagtatgctgacatc
gagtcctctaactacggcaccccgtatgagctggacagctattccccatcagctcctgaa
agaacagaccgggtgacgctgataaacgagtctcccctcctcagctacatggacttggtg
ggattcagcttccaggtggccaatgggatggaattcctggcttccaaaaattgtgtgcat
cgtgacctggctgccaggaacgtcctcatctgtgaggggaagctggtgaagatctgtgac
tttggcctggcacgagacatcatgagggattccaactatatctccaaaggcagtaccttc
ttgccccttaagtggatggctcctgagagcatcttcaacaacctctacaccaccctgagt
gacgtgtggtcctttgggattctcctctgggagatattcactctaggggggactccatac
cctgagctgcctatgaacgaacagttctacaatgccatcaaacgtggctatcggatgtcc
aaacccacccatgcctctgacgaaatctacgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagttggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgct
gttgtccgcacaagacccacgatccccaggctgaacaacgccaggatcacagccagctcc
ccccccagcagcatcctctacacctccgtgcaccagaatgggggcgagaatgattacatc
atccctctgcccgaccccaaaccagaggcaatctgtgacctccctcaggaggcctccatc
agccgggccagctctatgctgaacgaggctaacacatcgtctacaatatcctgtgacagc
cccctgggcctccggcaggacgaggagcaggaatgcgacccacagccaggctgccaggag
ctgaccacagggcaccaagaggtggaggagagcttcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (18)   

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