KEGG   Pedobacter sp. PACM 27299: AQ505_02860
Entry
AQ505_02860       CDS       T04140                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pep  Pedobacter sp. PACM 27299
Pathway
pep00061  Fatty acid biosynthesis
pep00071  Fatty acid degradation
pep01100  Metabolic pathways
pep01212  Fatty acid metabolism
pep02024  Quorum sensing
pep04146  Peroxisome
Module
pep_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pep00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    AQ505_02860
   00071 Fatty acid degradation
    AQ505_02860
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    AQ505_02860
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AQ505_02860
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pep01004]
    AQ505_02860
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pep04147]
    AQ505_02860
Enzymes [BR:pep01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     AQ505_02860
Lipid biosynthesis proteins [BR:pep01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   AQ505_02860
Exosome [BR:pep04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AQ505_02860
  Exosomal proteins of breast cancer cells
   AQ505_02860
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: ALL04526
UniProt: A0A0P0ND26
Position
686499..688271
AA seq 590 aa
MAVNITRVFDLLQYNLENFPKEEFISGKVKGEWKKYSTQHFCETVDTLSRGLLGIGVKKG
SKVAVMSANRPEWNITDFAIIQLGAYQVPLYPTLAEHDIKFILENAAVNVVFVADELIYQ
KVKIAAAELTSELKVYSFDPVKGIPSWEELLEAGKAQGGLDLEVYRAEVKADDILTLIYT
SGTTGTPKGVMLTHDNLVKNFEKSSVLVPPGLHKALSFLPLSHIFERMIVYLHMYKGASV
YYAESMETIVGDIQFVKPNAFSTVPRLLEKVYDKIMEKGKELTGIKRGIFFWALSVAEKF
EFDNGPFYKFKLGIARKLVFKKWQEALGGEIVVIVSGGAALNARLCRIFWAAGMPVMEGY
GLTETSPVITVNYIGATRFGTVGPPIDGVEVKIAEDGEVLARGHNIMKGYYNHPELTAES
IDKDGWFHTGDIGELIEGRFLKITDRKKEIFKTAGGKYVAPQMLENKLKESPLVEQVMVL
GENRKFPSALIIPTFAALKTWCAKKGIAYTTNELMIKDPQVLKKYDEIVAFSGKEFGKWE
QVKRIALLSKEWSIEGGELTPKLSLKRKVILEKNGLIIEKIYTDAADYKG
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctgtaaatatcacacgcgtatttgatttacttcaatacaatttagagaattttccc
aaagaggagtttataagtggtaaggttaaaggggagtggaaaaaatatagtacccagcat
ttttgtgaaacggtggatacactgagcagaggtttgctggggatcggtgtcaaaaaaggg
tcaaaggttgctgttatgtctgccaatcgcccggaatggaacattacagacttcgcaatt
atacagttaggtgcctaccaggtacctttatacccgacattagcggagcatgacattaag
tttattttggaaaatgcagctgtgaatgttgtttttgtagcggatgaactgatctatcaa
aaagtaaaaatagctgctgcagaattgacatcggagctgaaggtgtatagtttcgatccg
gtaaaaggaattccctcctgggaggaattgctggaggcagggaaggctcagggcggactg
gacttggaagtttaccgtgcggaagtgaaagctgatgatattttaaccttaatctatacc
tctggtactacaggtacaccaaaaggagtgatgctgacccatgacaacctggtgaaaaat
tttgaaaagtcttcggtgctggtgcctcctggactccacaaggcattgagctttttacca
ttatcgcatatttttgaacgcatgattgtgtacctccacatgtacaaaggagcatcagta
tattatgcagaaagtatggaaactattgtgggcgacatacaatttgtgaaacccaatgct
ttctctactgttccacgtttgctggaaaaggtatacgataaaattatggagaaaggaaag
gaattaacaggcatcaaaagaggcatatttttctgggcgctttccgttgcggaaaaattc
gaattcgataacggtcctttttataagttcaaactcggcattgccagaaagctggtcttt
aagaaatggcaggaagcgctgggcggcgaaattgtggtgattgtttctggaggagctgct
ttaaacgcgcgtttatgcaggattttctgggcagcaggaatgccggtcatggaaggatac
ggcttaacagaaacttcgccggtgatcacggtaaattatatcggggccaccagatttgga
actgtagggccgccgattgatggcgtagaagtgaagattgctgaagatggggaagtattg
gcccgcggacataacattatgaaaggctattataaccatccagaactgactgctgagtct
atagacaaagacggctggttccataccggagatattggcgaactgatcgaaggcaggttc
ctgaaaatcaccgatcgtaaaaaagaaatctttaaaacggcaggcggcaaatacgtagct
ccacagatgctggaaaataaattgaaagaatcccctttggtggagcaggtaatggtactt
ggtgaaaacagaaagtttccatcggccttaattattcctacttttgcagcgctgaaaacc
tggtgtgctaaaaagggaattgcttataccaccaatgaactgatgatcaaagatccgcag
gtattgaaaaagtatgatgaaattgttgcttttagcggcaaggagtttggcaaatgggaa
caggtgaaacgcattgcattgctctccaaagagtggagcattgaaggcggtgagctgacc
cctaaactgagcttaaaaagaaaggtcattctggagaaaaacggactgatcatagaaaaa
atttatacagatgcagcggattataagggctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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