KEGG   Pedobacter sp. PACM 27299: AQ505_14990
Entry
AQ505_14990       CDS       T04140                                 
Name
(GenBank) hypothetical protein
  KO
K11031  thiol-activated cytolysin
Organism
pep  Pedobacter sp. PACM 27299
Pathway
pep02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pep00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AQ505_14990
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02042 Bacterial toxins [BR:pep02042]
    AQ505_14990
Bacterial toxins [BR:pep02042]
 Type II toxins: Membrane damaging toxins
  Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
   AQ505_14990
SSDB
Motif
Pfam: Thiol_cytolysin
Other DBs
NCBI-ProteinID: ALL06687
UniProt: A0A0P0NH90
Position
complement(3565715..3566836)
AA seq 373 aa
MSKDASGASDPTLSGNNLKRFSYGPTIFNLSSFDKSGPKGIINRKKQNSIILIRDSAWAN
GSGTTFFYESTEVPAILPETRLKLYLGAIIRGNSAVDVENFTPMSIPAIHRNPITMYANF
PTDSISRSVLPAPSQDARYVRDAIKAGTGTQIQSFTYEQNQFRKVEELQKSFGASFNIGK
LLKVDFLDTTSTGANKTKVRAEFIQENFSINIEPPIYEPFLKPSYDMAQFGGIEPLIVSS
VTYGRKGIFIMESDSSFAMVKTTLSVALTLSAEMLGVGSESKLGSAFSVALNTRLTNAQK
SVIEHSKIYVYVMGVDGTSTVRAVTGGLAGFAQVIAECGGFKSDSPGAPLYYTLNYLSDF
GTFRNPFRINVRN
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgagtaaagatgcttccggggcatcagatccaactttatccggtaacaatttaaaacgc
tttagttacggtccaacgatcttcaatctgagctcttttgataaatcgggtcccaaaggc
atcatcaacagaaaaaagcagaattccattattttgattcgggatagtgcctgggctaat
ggttcaggaactacgtttttttatgaatcaactgaggttcctgctattttacctgaaaca
cgattaaaattgtatttgggagccattattcgtggcaatagtgccgtagatgtagagaat
tttacgccaatgtctattcctgctatacacagaaatccgataacgatgtatgctaacttt
cctaccgatagtatttcaagatcggttctgccagcacctagccaagatgcaaggtacgtt
agagatgcaataaaggccggtacagggacacaaatacagtcttttacttatgaacaaaat
cagttcagaaaagtggaagagcttcagaaatcctttggggctagttttaacatcgggaaa
ttactgaaagtagatttcttagatacgacctcgactggagcaaacaaaacaaaggttaga
gcggagtttattcaagaaaacttttcaattaatattgaacctcctatctatgaacctttt
ttgaaaccgagttatgatatggcccaatttggtggaatcgagccattaatcgtgagctca
gtgacttatggtagaaaaggaatttttatcatggaatctgattcttcatttgcgatggtt
aaaacgacgcttagtgtcgcacttacgctttccgctgaaatgcttggggttggttctgaa
tcgaagttaggatctgcgttttcggtcgctttaaacactcgtttgacgaatgcacaaaaa
tcagtaattgagcattctaaaatttatgtatatgtaatgggggtggatggcacctcgact
gtaagggcggttactggaggtctggctggttttgcacaggtaattgcggagtgtgggggc
ttcaaatcagattctcctggtgcaccattatactatactttaaattatttgtctgatttc
ggaaccttccgaaatccatttagaattaacgtccgcaattag

  All links  
Gene (9)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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