GenomeNet

Database: Pfam
Entry: ALC
LinkDB: ALC
Original site: ALC 
#=GF ID   ALC
#=GF AC   PF17527.5
#=GF DE   Phage ALC protein
#=GF PI   ALP;
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD097382
#=GF GA   25.00 25.00;
#=GF TC   31.40 31.20;
#=GF NC   24.00 23.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   8402894
#=GF RT   Bacteriophage T4 Alc protein: a transcription termination factor
#=GF RT   sensing local modification of DNA.
#=GF RA   Kashlev M, Nudler E, Goldfarb A, White T, Kutter E;
#=GF RL   Cell. 1993;75:147-154.
#=GF RN   [2]
#=GF RM   18271525
#=GF RT   Rapid isolation and identification of bacteriophage T4-encoded
#=GF RT   modifications of Escherichia coli RNA polymerase: a generic
#=GF RT   method to study bacteriophage/host interactions.
#=GF RA   Westblade LF, Minakhin L, Kuznedelov K, Tackett AJ, Chang EJ,
#=GF RA   Mooney RA, Vvedenskaya I, Wang QJ, Fenyo D, Rout MP, Landick R,
#=GF RA   Chait BT, Severinov K, Darst SA;
#=GF RL   J Proteome Res. 2008;7:1244-1250.
#=GF DR   INTERPRO; IPR020367;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   During the course of infection of Escherichia coil by
#=GF CC   bacteriophage T4, transcription of viral late genes does not
#=GF CC   take place unless template DNA contains hydroxymethyl cytosine
#=GF CC   (hmCyt), a modification normally effected by virus-encoded
#=GF CC   enzymes. Bacteriophage T4 Alc protein acts as a site-specific
#=GF CC   termination factor participating in shutting off host
#=GF CC   transcription after infection of E. coli, while the
#=GF CC   bacteriophage T4 transcription is protected from the action of
#=GF CC   Alc by overall substitution of cytosine with 5-hydroxymethyl
#=GF CC   cytosine in T4 DNA [1]. Based on genetic studies, Alc is thought
#=GF CC   to bind directly to the beta sub-unit dispensable region 1
#=GF CC   (bDR1) of E.coli RNAP. However, immune-isolation experiments
#=GF CC   show that Alc binds both core and sigma 70-holoenzyme of RNAP
#=GF CC   [2].
#=GF SQ   63
#=GS A0A7G3KBD5_9CAUD/1-165   AC A0A7G3KBD5.1
#=GS Q7Y4S3_BPR69/1-164       AC Q7Y4S3.1
#=GS W6ASR1_9CAUD/1-167       AC W6ASR1.1
#=GS A0A5P8PK52_9CAUD/1-168   AC A0A5P8PK52.1
#=GS I3WW25_9CAUD/4-161       AC I3WW25.1
#=GS I7LER1_9CAUD/1-168       AC I7LER1.1
#=GS A0A7G8LBN1_9CAUD/1-164   AC A0A7G8LBN1.1
#=GS A0A2I6UFW7_9CAUD/1-168   AC A0A2I6UFW7.1
#=GS D7RMM8_9CAUD/1-166       AC D7RMM8.1
#=GS Q6WI91_BPKVM/42-205      AC Q6WI91.1
#=GS J7I4J5_9CAUD/1-168       AC J7I4J5.1
#=GS A0A0A0Q3L6_9CAUD/1-165   AC A0A0A0Q3L6.1
#=GS Q19CH4_9CAUD/1-129       AC Q19CH4.1
#=GS A0A410T586_9CAUD/4-161   AC A0A410T586.1
#=GS E5FJ07_9CAUD/1-69        AC E5FJ07.1
#=GS A0A6B9XYB0_9CAUD/1-165   AC A0A6B9XYB0.1
#=GS A0A386K710_9CAUD/1-168   AC A0A386K710.1
#=GS A0A1B0VW21_9CAUD/1-166   AC A0A1B0VW21.1
#=GS A0A386K4P0_9CAUD/1-166   AC A0A386K4P0.1
#=GS A0A345AV52_9CAUD/3-160   AC A0A345AV52.1
#=GS A0A2I6PF94_9CAUD/1-166   AC A0A2I6PF94.1
#=GS E3SF43_9CAUD/1-167       AC E3SF43.1
#=GS A0A126HHU0_9CAUD/1-163   AC A0A126HHU0.1
#=GS A0A410T687_9CAUD/1-162   AC A0A410T687.1
#=GS A0A5B7LG83_9CAUD/1-168   AC A0A5B7LG83.1
#=GS A0A060AMJ4_9CAUD/6-173   AC A0A060AMJ4.1
#=GS E5EYZ2_9CAUD/2-152       AC E5EYZ2.1
#=GS A0A3Q9R9N8_9CAUD/1-166   AC A0A3Q9R9N8.1
#=GS A0A192YAC2_9CAUD/1-165   AC A0A192YAC2.1
#=GS A0A3T0IGS2_9CAUD/3-160   AC A0A3T0IGS2.1
#=GS A0A482JSZ5_9CAUD/1-166   AC A0A482JSZ5.1
#=GS A0A1Z1LYN8_9CAUD/1-165   AC A0A1Z1LYN8.1
#=GS A0A7D7EUT3_9CAUD/1-69    AC A0A7D7EUT3.1
#=GS A0A2S1GLW7_9CAUD/1-167   AC A0A2S1GLW7.1
#=GS A8R9L5_9CAUD/1-164       AC A8R9L5.1
#=GS A0A2H4YGJ3_9CAUD/1-166   AC A0A2H4YGJ3.1
#=GS A0A7G8AL33_9CAUD/22-187  AC A0A7G8AL33.1
#=GS R9TF78_9CAUD/15-182      AC R9TF78.1
#=GS A0A4Y5TRC2_9CAUD/1-168   AC A0A4Y5TRC2.1
#=GS D9I6F7_9CAUD/3-152       AC D9I6F7.1
#=GS A0A2K9VN33_9CAUD/1-167   AC A0A2K9VN33.1
#=GS ALC_BPT4/1-167           AC P04546.2
#=GS A0A023W5Y2_9CAUD/1-170   AC A0A023W5Y2.1
#=GS Q6U999_9CAUD/1-163       AC Q6U999.1
#=GS A0A7D7ES63_9CAUD/35-201  AC A0A7D7ES63.1
#=GS A0A5B9NFI5_9CAUD/1-168   AC A0A5B9NFI5.1
#=GS E5EQ06_9CAUD/1-164       AC E5EQ06.1
#=GS A0A6H0X7T7_9CAUD/42-205  AC A0A6H0X7T7.1
#=GS A0A0B6VLB9_9CAUD/1-165   AC A0A0B6VLB9.1
#=GS A0A346FJV4_BPT6/1-167    AC A0A346FJV4.1
#=GS E1A1B0_9CAUD/1-168       AC E1A1B0.1
#=GS A0A0A0YVQ6_9CAUD/1-166   AC A0A0A0YVQ6.1
#=GS A0A0G2SSY3_9CAUD/1-166   AC A0A0G2SSY3.1
#=GS A0A2Z5ZDC4_9CAUD/1-167   AC A0A2Z5ZDC4.1
#=GS E5DHW2_9CAUD/1-167       AC E5DHW2.1
#=GS E3SF44_9CAUD/1-69        AC E3SF44.1
#=GS C3V2L0_BPR51/1-167       AC C3V2L0.1
#=GS A0A482MVJ1_9CAUD/1-166   AC A0A482MVJ1.1
#=GS A0A3G2KB14_9CAUD/22-187  AC A0A3G2KB14.1
#=GS E5FJ06_9CAUD/1-167       AC E5FJ06.1
#=GS A0A088FSD9_9CAUD/22-187  AC A0A088FSD9.1
#=GS M1EAS0_9CAUD/1-166       AC M1EAS0.1
#=GS A0A3Q9R8Y2_9CAUD/1-166   AC A0A3Q9R8Y2.1
A0A7G3KBD5_9CAUD/1-165              .....MNLQAITNEAVVEEF..GD..RH.D..GIYVYKGSKK.IGFLTDLRLTLGRKLSQK....VKQKAYSTKQTE...ERREAMPQAVDNMV.EFLANNLP-.......-DAEVFVNISQPNVHINGH..KFYIICDPLTDKfN.RLGIAHSTLTSDEVAALIDN..SHKVQ-SE.SAKHVLVNGLSRDDIVEVIKKLC-k....................................
Q7Y4S3_BPR69/1-164                  .....--MQLITNDMVVTAF..GD..TT.D..GIRVFKKGRP.VGYLTDLRVTLAKNLKKK....VKQKEYSTRYAE...EKREAMPEAVNAMV.EFLQNNLTK.......YDANVFINISQPNVHIAGI..KFYIICDPLTDKfN.RLGISSPYHTAEELCVLFE-..SYKI-QCD.GLKTVLINGLSRDEIIEIIKT---clk..................................
W6ASR1_9CAUD/1-167                  ....m--LNLITAEELIEIY..GG..THhD..GIRIFKNSRP.LGYITDLRVAYSRDQKRQ....KARKEYSNRVNE...ERAEKMPEAVEEMR.SFLDNHLTK.......YGAEVMINISQPNVHVNGC..KCYIIVDPIYGK.H.RLGVSNPRLSASEMAEMVDP..CFKIQNSP.AEHHILINGLSQDDIVQAIIKLCS.....................................
A0A5P8PK52_9CAUD/1-168              .....MNLQNISNDDVVAHF..EG..TShD..GIYVYKGQKK.LGFISDLRVTMGRKLAAK....FKQKQYSTKQVE...ERREAMPAAVEEMR.SFLENQMTK.......YGAEVKINITQPNVHLNGH..KCYIICDPLSDKfN.RLGIKHLYKTGEDMAFELDG..-YKTQLDK.APKHILVNNLSRDEIVEVIKKLC-l....................................
I3WW25_9CAUD/4-161                  ..tvy----TLTPEVLVEMF..GD..SK.D..WYSVLKNGKR.VGTFADLRKLVLK----R....QTLADVAERKKL...AASLAKDDHIREAK.RFFENRIK-.......-NGEVFINETQPNVLINGC..KVYIICGT-SPK.I.RMGILHKEATFDEMLIAS-G..KDKAKSTT.CKRHILFDGLDLEEAAELIDLLC-g....................................
I7LER1_9CAUD/1-168                  .....MNMQLITNDMLVERY..GS..TH.D..GIRVFGSNDKpIGYLTDLRVAYSRDIKAN....KKQKEYNNKIAE...ARRDAMPEAVEQMK.DYLKSQLVK.......YDAEVFINISQPNVHLNGC..KCYITVDSLNDKsH.RLGIMHPTLSTNDMS-DMIQ..GFKVSIGT.SDNHILWNNLSADDIIDTIKRVC-l....................................
A0A7G8LBN1_9CAUD/1-164              .....MNVQSLTNEQLAAYF..NM..TV.DsnGFQVVDEKGR.RHYLTDLRQKAMKSAKTK....KARKVRAEAQPK..aTAEELLAELQSESS.DFWEIRESQpgmdseeHGLNVYVTTGLPDSHRVMI..RSSVLSNKELDR.E.-LGHLNPAKHKEV-------..-----QRR.KKSTIIFSNRSAKEIVEIIEKVKS.....................................
A0A2I6UFW7_9CAUD/1-168              .....MNLQNISNDDVVAHF..EG..TShD..GIYVYKGQKK.LGFISDLRVTMGRKLAAK....FKQKQYSTKQVE...ERREAMPAAVEEMR.SFLENQMTK.......YGAEVKINITQPNVHLNGH..KCYIICDPLSDKfN.RLGIKHLYKTGEDMAFELDG..-YKTQLDK.APKHILVNNLSRDEIVEVIKKLC-l....................................
D7RMM8_9CAUD/1-166                  .....MNMQMITNEMVVKAF..GD..ST.D..GIQVFKGSRA.VGYLTDLRVTLAKNAKKK....IKQKEYSTRYAE...EKREAMPEAVNSMV.EFLRNNLSK.......YDAEVFINISQPNVKISGI..TFYLICDPLSDKfN.RLGISSPYHTAEELCFMFE-..TYKI-QCE.NPKTVLINSLSRDDIIEIITK---cln..................................
Q6WI91_BPKVM/42-205                 .....MNAQSMTNAQIAELF..DM..TV.DanGFQAVDAKGR.RHYLTDLRQKAMKAAKTK....KARKVRAEAQPK..aTAEELLAELQSESS.DFWEIRESQpgmdseeHGLNVYVTAGLPDRHRVMI..RSSVLTNKELDR.E.-LGYLNPSKQKEE-------..-----QRR.KKSTIIFSNRSAKEIVEIIEKVKS.....................................
J7I4J5_9CAUD/1-168                  .....MNHYNYTVEILINMYalGG..SS.D..GIRIFDKNGKvVGYITDLRKAAHSAAEKK....EKSKSYSREYYQ...QAKTNIGPMVNEVV.NELKNVFAG.......TPAKVFINETMPNVNFMGA..KFYFILSPLTDK.I.RVNITH--KDACRMKYVFPR..HAKLDIRQ.GGKSILIDGLTRSEGIALVKGFC-e....................................
A0A0A0Q3L6_9CAUD/1-165              .....MNLQLITNEMVTAEF..GD..RH.D..GICVYKGNKN.VGFLTDLRVTLGRKSSKK....LKQKAYSTKLTE...ERREAMPGAVESMV.EFLSNNLP-.......-GAEVFINISQPNVHIDRS..KFYIICDPLTDKfN.RLGIMHQTLTSEEISEMIDN..SHKL-QSE.SARHVLVNGLSRDDIVEIIKKLC-k....................................
Q19CH4_9CAUD/1-129                  ....m---------------..--..--.-..----------.-------RKAAHSAAEKK....EKSKSYSREYYQ...QAKTNIGPMVNEVV.NELKNVFAG.......TPAKVFINETMPNVNFMGA..KFYFILSPLTDK.I.RVNITH--KDACRMKYVFPK..HAKLDIRQ.GGKSILIDGLTRSEGIALVKGFC-e....................................
A0A410T586_9CAUD/4-161              ..tvy----TLTPEVLVEMF..GD..SK.D..WYSVLKDGKR.VGTFADLRKLVLK----R....QTLADAAERKKL...AASLAKDDHIREAK.RFFENRIK-.......-NGEVFINETQPNVLINGC..KVYIICGT-SPK.I.RMGILHKEATFDEMLIA-SG..KDKAKPTT.CKRHILFDGLDLEEAAELIDLLC-g....................................
E5FJ07_9CAUD/1-69                   ....m--LNLISNDRVTKAY..GD..RN.D..GIYVYKGDRR.IGFITDLKAKLLKELKDQ....TGDSGFRARAKK...KDER----------.---------.......-------------------..------------.-.--------------------..--------.------------------------lgansf...............................
A0A6B9XYB0_9CAUD/1-165              .....MNLQAITNEAVVEEF..GD..RH.D..GIYVYKGSKK.IGFLTDLRLTLGRKLSQK....VKQKAYSTKQTE...ERREAMPQAVDNMV.EFLSNNLP-.......-DAEVFVNISQPNVHINGH..KFYIICDPLTDKfN.RLGIAHSTLTSDEVAALIDN..SHKVQ-SE.SAKHVLVNGLSRDDIVEVIKKLC-k....................................
A0A386K710_9CAUD/1-168              .....MDMQAITLDMVVNKY..GT..HS.D..GIFVWNGTKK.VGFVTDLRTHMARKEAAR....KKQKEYTNRVNE...QRAEALPEAVDEMI.EFLDNHLTK.......YGAEVFKNITQPNVHANGC..KCYVIVDPIYGK.H.RLGIMHRELNYSEMAEYVEA..CFKCSPSEsSDRHILISGLSRDDIVEVILKLCS.....................................
A0A1B0VW21_9CAUD/1-166              .....MNLQLITNEALVEKY..GT..HH.D..GISVFKGSRR.VGYLTDLRKAFAADQKKR....KKQKEYNNKVTE...ARQEAMPEAVEEMK.NFLENQLTK.......YGAEVIINITQPNVLINDC..KCYITVDPIYGK.H.RLGIHNPYMDSSEMADEIQ-..GFKVSQSD.APNHVLWNGLSQDDIVEVIVKLC-k....................................
A0A386K4P0_9CAUD/1-166              .....MNMQLITNDMVVAAF..GD..SS.D..GIRVFKKGRP.VGYLTDLRVTLAKNAKKK....LKQKEYSTRYTE...EKREAMPEAVNAMV.EFLQNNLTK.......YDANVFINISQPNVHIAGI..KFYIICDPLTDKfN.RLGISSPYHTAEELCVLFE-..SYKI-QCD.GPKTVLINGLSRDEIIEIIKT---clk..................................
A0A345AV52_9CAUD/3-160              ..htv---HTLTPEVLVEMF..GD..DK.D..WCSVLKNGKR.VGYFSDLRKEVLK----R....QALADKKERKKF...HDSLMLNDNIRETK.RFFEDRLK-.......-NAHVFINETQPNVHLNGS..KFYIICG-ATPK.I.RLGVTHKDLTFDEIVQLAER..EAR--QST.SPRHALFNNLDLEEAAQLIELL--ag...................................
A0A2I6PF94_9CAUD/1-166              .....MDLQLITNDMVVASF..GD..RH.D..GLSVWKGSKR.VGYLSDLRAALGRNKSKS....LKQKEYNNRVSE...ERREKLPEAVQEMK.SFLESYLAN.......TDAEVFINISQPNVHINGH..KCYIIVDPIYEK.H.QLGIMHKELTYDDMASLI-P..SFSCSSST.SRNHILFRGLSSDDIINTIFKVC-q....................................
E3SF43_9CAUD/1-167                  .....MNMQLISNDMIVDVY..GD..RH.D..GIYVYKGSKN.VGFLTDLRKKLASDNKLK....AKQKEYRDKKSE...ERKEALHESVPEMV.DFLKNHLVK.......YDAEVFINQTQPNVHINGC..VCYVVVEPLTLQ.H.RLGIKHPVLTQDDMADEVGN..QFRISASD.STNHILLNGLSQDDIVEVIIKLC-k....................................
A0A126HHU0_9CAUD/1-163              .....MNVQSLTNEQLAARY..NM..TV.DsnGFQAVDDKGR.RHYLTDLRQKAMKEAKTK....RTSKVKAAASKIalpTAEENLARLNGDFTeHQWFIRESQpgldieeLGLRFYFI-GGHERHQLNI..RTKHFSNKELNN.-.--------------------..--------.------------------------fyadkkilkahkgtgsitigslsydevveiandiiek
A0A410T687_9CAUD/1-162              ...mf--AAQVTNQQIEEHF..NV..KV.I.nEFSAEDEKGR.RKYLSDLRTQYAKEVNNK....AKESNKAKKRPS...LVKERVQDVFVELD.RIF------.......EDHNVLIRESQPGLDLEEIglQVYVMVAP-YGK.Y.RMSMSSKVFSAEEMKEDF-A..HYRIAKKE.SNTDITIQSLEFDEMVEVIKQ---aiq..................................
A0A5B7LG83_9CAUD/1-168              .....MDMQAITLDMVVNKY..GT..HS.D..GIFVWNGTKK.VGFVTDLRTHMARKEAAR....KKQKEYTNRVNE...QRAEALPEAVDEMI.DFLDNHLAK.......YGAEVFKNITQPNVHANGC..KCYVIVDPIYGK.H.RLGIMHRELNYSEMAEYVEA..CFKCSPSEsSDRHILISGLSRDDIVEVILKLCS.....................................
A0A060AMJ4_9CAUD/6-173              ntvnv--------TEVVEHFspNG..TT.D..GIQVFNEKGRpVGYLTDLKIKFCQKSNAK....VKAKASQKLRAA...ERKEIISDLVEEMI.LFLRSELRV.......--GDVFVNETMPNVDVNGE..RFYVIIGNSLDS.SiRLNIRHKEFVADDFNDILVGgyTAKCHDET.DIHNVMFSSLSKEDVAFIINQL--ad...................................
E5EYZ2_9CAUD/2-152                  ...yt--MQTLTQAKLIELF..PE..GT.P..DWAGISIKGV.HHTFSTLRARVLQEQAKK....CGTQLKREEN--...---------VKEMK.RMLEDKVK-.......-NGEVFINQTQPNVHINGC..KCYI-TCGASGK.H.RLGIVHAELSFDEMQQ--LA..GVKGTPST.SNRHILFNNLTFEEICVMIKLLC-g....................................
A0A3Q9R9N8_9CAUD/1-166              .....MDLQLITNDMVVASF..GD..RH.D..GLSVWKGSKR.VGYLSDLRAALGRNKSKS....LKQKEYNNRVSE...ERREKLPEAVQEMK.SFLESYLAN.......TDAEVFINISQPNVHINGH..KCYIIVDPIYEK.H.QLGIMHKELTYDDMASLI-P..SFSCSSST.SRNHILFRGLSSDDIINTIFKVC-q....................................
A0A192YAC2_9CAUD/1-165              ..mis----QITNEMVVAKY..GD..NT.D..GIFVYKNGRS.VGYLTDLRIAYHKKVRTN....KKQKEYSNRINE...RRKEEMPDLVEATK.EFLENHLAK.......YDANVFVNISQPNVHMNGN..KCYIICDPIGQK.F.QLGIYHTTYDYNYMSDEF-P..GIKCSPSS.SSHHILFRGLERDDILEIIKKLC-k....................................
A0A3T0IGS2_9CAUD/3-160              ..htv---HTLTEDVLVEMF..GD..SK.D..WCSVFKDGKR.VGYFADLRKEVLKR----....QTLADKKERKKF...HDSLMLNDNISETK.RFLESRLK-.......-NAHVFINETQPNVHLNGS..KFYIICG-ATPK.I.RMGVTHKELDFDQIVQLAER..--EARQSS.SKRHALFSNLDLEEAAQLIELL--ag...................................
A0A482JSZ5_9CAUD/1-166              .....MNMQMITNEMVVKAF..GD..ST.D..GIQVFKGSRA.VGYLTDLRVTLAKNAKKK....IKQKEYSTRYAE...EKREAMPEAVNSMV.EFLQNNLSK.......YDAEVFINISQPNVKIAGI..TFYLICDPLSDKfN.RLGISSPYHTAEELCVMFE-..TYKI-QCE.NPKTVLINSLSRDDIIEIITK---cln..................................
A0A1Z1LYN8_9CAUD/1-165              .....MNLQLISNDMIVAEY..GD..RH.D..GISVYKGQKR.IGFLSDLRLTLGRKSAAK....VKAKAYSSKQTE...ERREAMPQAVDNMV.EFLTNNLP-.......-NAEVFINITQPNVRIGGH..KFYIICDPLTDKyN.RLGILHGELTSDEVAMMIDN..SHKV-QSE.SARHVLVNGLSRDDIVEVIKKLCS.....................................
A0A7D7EUT3_9CAUD/1-69               ....m--LNLITNERVTQAY..GD..SN.D..GIYVYKGDRR.IGFITDLKAKLLKELKAQ....TGDSGFRARAKK...KDER----------.---------.......-------------------..------------.-.--------------------..--------.------------------------lgansf...............................
A0A2S1GLW7_9CAUD/1-167              .....MNMQLITNEMLVEKY..GD..RH.D..GICVFNGGKT.VGFLTDLRTAFAKDQKKR....RKQKDYTDRVTE...ARRDAMPEAVNEMK.EYLENQLAK.......YDADVFINLTQPNVHLNGH..KLYITVDPIYGK.H.RLGIMHASMSSSELAEEVDT..CYRISYSD.SPRHILINGIEKDAIVETIIKLCS.....................................
A8R9L5_9CAUD/1-164                  .....--MQMITNEMVVKAF..GD..ST.D..GIQVFKGSRA.VGYLTDLRVTLAKNAKKK....IKQKEYSTRYAE...EKREAMPEAVNSMV.EFLQNNLSK.......YDAEVFINISQPNVKIAGI..TFYLICDPLSDKfN.RLGISSPYHTAEELCFMFET..-YKV-QCE.NPKTVLINSLSRDDIIEIITK---cln..................................
A0A2H4YGJ3_9CAUD/1-166              ...mi---NQITANELVEIY..EG..THhD..DIRVFKGQRP.IGYITDLRVAHARAQKRQ....KARKEYTNRINE...ERAEKMPEAVNEMV.DFLKNNL-R.......MPADVMINISQPNVHVNGC..KCYIIVDPMYGK.H.RLGVSNPNRTASEMALDVDS..SFKIQESP.AEHHILINGLSQDDIVEHIRKLCS.....................................
A0A7G8AL33_9CAUD/22-187             .....MNMQLITNDMVVTAF..GD..TT.D..GIRVFKKGRP.VGYLTDLRVTLAKNLKKK....VKQKEYSTRYAE...EKREAMPEAVNAMV.EFLQNNLTK.......YDANVFINISQPNVHISGI..KFYIICDPLTDKfN.RLGISSPYHTAEELCVLFE-..SYKI-QCD.GPKTVLINGLSRDEIIEIIKT---clk..................................
R9TF78_9CAUD/15-182                 .....MNAQTMTNEQIAKLF..DM..KL.SsnGFQAIDKKGR.GHFLTDLRQRVMKAEKTKakatKTRKVREEQEPS..vSAEDLLHELQSESS.DYWFIRDTQpgmdsltHGLNVYVSAGKPDHHRLIV..RSNQLSMKEIDR.E.-LGYLNPRKQEEG-------..-----HHR.AKTTVFFSNKTAKEIVEIVEKLK-e....................................
A0A4Y5TRC2_9CAUD/1-168              .....MNLQNISNDDVVAHF..EG..TShD..GIYVYKGQKK.LGFITDLRVTMGRKLATK....FKQKQYSTKQAE...ERREAMPAAVEEMC.SFLENQLTK.......YGAEVKINITQPNVHLNGH..KCYVICDPLSDKfN.RLGIKHLYKTSEDMALELD-..GYKIQVDK.APKHILVNNLSRDEIVEVIKKLC-l....................................
D9I6F7_9CAUD/3-152                  ..ytl---EKLTHQKLQELF..PG..TP.NwcGIN-IKGKHR.T--YAELRAEVMKEQERK....GTSKLRKSN---...--------HIEEMK.RVLEMEFPK.......A--DVFINKTQPNVHINGC..KCYIICTSAATY.-.RLGIMHKETSFDDMQTIA--..EMQGVPSA.SKRHILFNYIDQETLIKLIKLLC-h....................................
A0A2K9VN33_9CAUD/1-167              .....MDLQLITTEMVVEAY..GD..TT.D..GISVFKGNRR.VGYITDLKKDLAKQVKRK....TTIKEYRNRRLE...QARDMLPDAVEEMK.VFLENQLAK.......YDCDVFINQTQPNVHINSC..KCYIIVNPLTGK.H.RLGISNPNRSASDMAEDVEA..CFKISKSP.AEHHILINGLSQDDIIEVIKTLCM.....................................
ALC_BPT4/1-167                      .....MDLQLITTEMVVEAY..GD..TT.D..GISVFKGNRR.VGYITGLKKDLAKQVKRK....TTIKEYRNRRLE...QARDMLPDAVEEMK.VFLENQLAK.......YDCEVFINQTQPNVHINSC..KCYIIVNPLTGK.H.RLGISNPNRSASDMAEDVEA..CFKISKSP.AEHHILINGLSQDDIVEVIKTLCM.....................................
A0A023W5Y2_9CAUD/1-170              .....MNLQLITNQMILDTFapGG..RE.D..GIYAYNEKGKnLGFLSDLRIAVARKDKAY....RVAQERRQRENQ...ERDEKMPQAVEDMI.AFLENNLTK.......IDAKVFKNITQPNVHACGH..KFYLIVDPIHGN.N.RLGIMHATKYHADLVLDFEG..YKIQGKDM.GTKHILINGLSQDEIVEIILKVC-q....................................
Q6U999_9CAUD/1-163                  ...mf------TTQDIINEF..AEggYS.D..GIQIFAKNGReVGYITDLRQQMMKDAKKK....EYSRTYAADRYN...RLKDDIGPLAQDVL.KELKNVFAN.......VPAKVFINETMPNVHFMGA..KFYFILSPLTQK.V.RVNIIHKNAC--RMKYVFPK..SAKLEIRR.GGMDIMIDGLERDA----------gialvegfa............................
A0A7D7ES63_9CAUD/35-201             .....MDMQLISNEMIVNEY..GD..RH.D..GIYVYKGTKK.IGLMTDLRKKLASNKKLK....AKQKEYRDKKSE...ERKEALHESVPEMV.DFLKNHLVK.......YDAEVFINQTQPNVHINGC..VCYVVVEPLTLQ.H.RLGIKHPVLTQDDMADEVGN..QFRISASD.STNHILLNGLSQDDIVEVIIKLC-k....................................
A0A5B9NFI5_9CAUD/1-168              .....MDMQAITLDMVVNKY..GT..HS.D..GIFVWNGTKK.VGFVTDLRTHMARKEAAR....KKQKEYTNRVNE...QRAEALPEAVDEMI.DFLDNHLAK.......YGAEVFKNITQPNVHANGC..KCYVIVDPIYGK.H.RLGIMHRELNYSEMAEYVEA..CFKCSPSEsSDRHILISGLSRDDIVEVILKLCS.....................................
E5EQ06_9CAUD/1-164                  .mnht--AQSLTQEVLTKMF..GD..SS.D..WYSVLKNGKR.VGSFADLRKAVLDKQERD....RKKAKRAEEQST...LNKHNTKRSIEDTK.RFFESSI--.......KNGKVFINRTQPNIHINDC..KCYIVCGP-TNK.I.RLGIMHHTKSFDEMQ--NEA..GIKGLPNM.SKNHILFDNIDLDEAKALIDLLC-g....................................
A0A6H0X7T7_9CAUD/42-205             .....MNAQSMTNAQIAELF..DM..TV.DanGFQAVDAKGR.RHYLTDLRQKAMKAAKTK....KARKVRAEAQPK..aTAEELLAELQSESS.DFWEIRESQpgmdseeHGLNVYVTAGLPDRHRVMI..RSSVLTNKELDR.E.-LGYLNPSKQKEE-------..-----QRR.KKSTIIFSNRSAKEIVEIIEKVKS.....................................
A0A0B6VLB9_9CAUD/1-165              .....MNLQLISNDMVVTEF..GD..RH.D..GISVYKGTKR.VGFLSDLRLTLGRKLAQK....VKQKAYSTKQTE...ERREAMPQAVDTMV.EFLSNNLP-.......-NAEVFINISQPNVHIDGH..KFYIICDPLTDKfN.RLGIAHSTLSSDEVAELIDN..SHKV-QSE.SARHVLVNGLSRDDIVEVIKKLC-k....................................
A0A346FJV4_BPT6/1-167               .....MDLQLITTEMVVEAY..GD..TT.D..GISVFKGNRR.VGYITDLKKDLAKQVKRK....TTIKEYRNRRLE...QARDMLPDAVEEMK.VFLENQLAK.......YDCDVFINQTQPNVHINSC..KCYIIVNPLTGK.H.RLGISNPNRSASDMAEDVEA..CFKISKSP.AEHHILINGLSQDDIIEVIKTLC-n....................................
E1A1B0_9CAUD/1-168                  .....MNHYNYTVEILINTYalGG..SS.D..GIRIFDKNGKvVGYITDLRKAAHSAAEKK....EKSKSYSREYYQ...QAKTNIGPMVNEVV.NELKNVFAG.......TPAKVFINETMPNVNFMGA..KFYFILSPLTDK.I.RVNITH--KDACRMKYVFPQ..HAKLDIRQ.GGKSILIDGLTQSEGIALVKGFC-e....................................
A0A0A0YVQ6_9CAUD/1-166              ...mi---NQITANELVEIY..EG..THhD..DIRVFKGQRP.IGYITDLRVAHTRGQKRQ....KARKEYTNRINE...ERAEKMPEAVNEMV.DFLKNNL-R.......MPADVMINISQPNVHVNGC..KCYIIVDPLYGK.H.RLGVSNPNRTASEMALDVDS..SFKIQESP.AEHHILINGLSQDDIVEHIRKLCS.....................................
A0A0G2SSY3_9CAUD/1-166              .....MDLQQITNETVVAAF..GD..RH.D..GIWVYKGSKK.VGYLSDLRTAISRNDSKR....SKQKEYNDRISE...ERREKMPEAVQEMK.SFLESYLAN.......TGAEIFINISQPNVHINGH..KCYIIVDPIYEK.H.QLGIMHKNMTYDDMASEIP-..SFSCSSST.SRNHILFRGLSSDDIINTIFKLC-r....................................
A0A2Z5ZDC4_9CAUD/1-167              .....MNMQLITNEMVMAQY..GD..RH.D..GISIFKGSKT.IGYITDLRIAMARNLSKR....KKQKEYNNKVTE...ARRDAMPDAVEEMK.SFLENQLGK.......YGAEVFINISQPNVHLSGN..KCYIIVDPIYGN.H.RLGIQHSRLTADEMASMVET..CFKISASD.SPHHILINNMTQDDIFETIVKLC-l....................................
E5DHW2_9CAUD/1-167                  ....m--LNLITAEELVEIY..EG..THhD..GIRIFKNSRP.LGYITDLRVAYSRDQKRQ....KARKEYSNRVNE...ERAEKMPEAVEEMR.SFLDNHLTK.......YGAEVMINISQPNVHVNGC..KCYIIVDPIYGK.H.RLGVSNPRLSASEMAEMVDP..CFKIQNSP.AEHHILINGLSQDDIVQAIIKLCS.....................................
E3SF44_9CAUD/1-69                   ....m--LNLITNERVTQAY..GD..SN.D..GIYVYKGDRR.IGFITDLKAKLLKELKAQ....TGDSGFRARAKK...KDER----------.---------.......-------------------..------------.-.--------------------..--------.------------------------lgansf...............................
C3V2L0_BPR51/1-167                  .....MDLQLITTEMVVEAY..GD..TT.D..GISVFKGNRR.VGYITDLKKDLAKQVKRK....TTIKEYRNRRLE...QARDMLPDAVEEMK.VFLENQFAK.......YDCEVFINQTQPNVHINSC..KCYIIVNPLTGK.H.RLGISNPNRSASDMAEDVAA..CFKISKSP.VEHHILINGLSQDDIIEVIKTLCM.....................................
A0A482MVJ1_9CAUD/1-166              .....MNMQLITNDMVVNAF..GD..TT.D..GIRVFKKGRP.VGYLTDLRVTLAKNLKKK....VKQKEYSTRYAE...EKREAMPEAVNAMV.EFLQNNLTK.......YDANVFINISQPNVHIAGI..KFYIICDPLTDKfN.RLGISSPYHTAEELCVLFE-..SYKI-QTD.GPKTVLINGLSRDEIIEIIQT---clk..................................
A0A3G2KB14_9CAUD/22-187             .....MNMQLITNDMVVAAF..GD..ST.D..GIRVFKKGRP.VGYLTDLRVTLAKNLKKK....VKQKEYSTRYAE...EKREAMPEAVNAMV.EFLQNNLTK.......YDANVFINISQPNVHIAGI..KFYIICDPLTDKfN.RLGISSPYHTAEELCVLFE-..SYKI-QCD.GLKTVLINGLSRDEIIEIIKT---clk..................................
E5FJ06_9CAUD/1-167                  .....MNMQLISNEMIVDVY..GD..RH.D..GIYVYKGSKN.VGFLTDLRKKLASDNKLK....TKQKEYRNKKSE...ERKEALHESVPEMV.DFLKNHLVK.......YDAEVFINQTQPNVHINGC..VCYVVVEPLTLQ.H.RLGIKHPVLTQDDMADEVGN..QFRISASD.STNHILLNGLSQDDIVEVIIKLC-k....................................
A0A088FSD9_9CAUD/22-187             .....MNMQLITNDMVVTAF..GD..TT.D..GIRVFKKGRP.VGYLTDLRVTLAKNLKKK....VKQKEYSTRYAE...EKREAMPEAVNAMV.KFLQNNLTK.......YDANVFINISQPNVHIAGI..KFYIICDPLTDKfN.RLGISSPYHTAEELCVLFE-..SYKI-QCD.GLKTVLINGLSRDEIIEIIKT---clk..................................
M1EAS0_9CAUD/1-166                  .....MNLQLITNEALVEKY..GT..HH.D..GISVFKGSRR.VGYLTDLRKAFATDQKKR....KKQKEYNNKVTE...ARQEAMPEAVEEMK.NFLENQLTK.......YGAEVIINITQPNVLINDC..KCYITVDPIYGK.H.RLGIHNPYMNSSEMADEIQ-..GFKVSQSD.APNHVLWNGLSQDDIVEVIVKLC-k....................................
A0A3Q9R8Y2_9CAUD/1-166              .....MNMQMITNEMVVKAF..GD..ST.D..GIQVFKGSRA.VGYLTDLRVTLAKNAKKK....IKQKEYSTRYAE...EKREAMPEAVNSMV.EFLQNNLSK.......YDAEVFINISQPNVKISGI..TFYLICDPLSDKfN.RLGISSPYHTAEELCFMFE-..TYKI-QCE.NPKTVLINSLSRDDIIEIITK---cln..................................
#=GC seq_cons                       .....MshQhITN-hlVpta..G-..sp.D..GIpVaKus++.lGalTDLRhshu+phcpK....pKpK-Yss+hsE...p++EthP-AVpEMh.cFLcNpLsp.......hsA-VFINhoQPNVHlsGp..KhYlIs-PlssK.p.RLGIhp..hot--hs..ht...saKhttsp.ut+HILlNGLSpD-IlElIpplC.t....................................
//
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