GenomeNet

Database: Pfam
Entry: Arc_PepC
LinkDB: Arc_PepC
Original site: Arc_PepC 
#=GF ID   Arc_PepC
#=GF AC   PF06819.17
#=GF DE   Archaeal Peptidase A24 C-terminal Domain
#=GF AU   Yeats C;0000-0003-0080-6242
#=GF SE   Yeats C
#=GF GA   23.40 23.40;
#=GF TC   23.40 24.80;
#=GF NC   23.00 21.90;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 90746521 --cpu 8 HMM pfamseq
#=GF TP   Domain
#=GF DR   INTERPRO; IPR009639;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This region is of unknown function but is found in some archaeal
#=GF CC   Pfam:PF01478. It is predicted to be of mixed alpha/beta
#=GF CC   secondary structure by JPred.
#=GF SQ   36
#=GS A0A133UE51_9EURY/240-353  AC A0A133UE51.1
#=GS EPPA_METJA/207-313        AC P81324.1
#=GS A0A328SFB2_9EURY/229-329  AC A0A328SFB2.1
#=GS A0A328SJ31_9EURY/208-310  AC A0A328SJ31.1
#=GS A0A166DBK3_9EURY/269-372  AC A0A166DBK3.1
#=GS A0A133UAN0_9EURY/237-350  AC A0A133UAN0.1
#=GS F6BDF8_METIK/205-313      AC F6BDF8.1
#=GS A0A133VLJ9_9EURY/226-339  AC A0A133VLJ9.1
#=GS A0A328SE80_9EURY/11-110   AC A0A328SE80.1
#=GS A0A656YXC7_9EURY/129-235  AC A0A656YXC7.1
#=GS A0A1D2W5B8_9EURY/239-351  AC A0A1D2W5B8.1
#=GS A0A1D3L212_9EURY/239-350  AC A0A1D3L212.1
#=GS A0A133V6X1_9EURY/125-231  AC A0A133V6X1.1
#=GS EPPA_METMP/209-316        AC Q6M0N8.1
#=GS EPPA_METTH/240-350        AC O26521.1
#=GS Q5JED9_THEKO/255-365      AC Q5JED9.1
#=GS F0T697_METLA/244-355      AC F0T697.1
#=GS A0A133VJN6_9EURY/235-348  AC A0A133VJN6.1
#=GS A0A133U6M7_9EURY/129-235  AC A0A133U6M7.1
#=GS C5A5I8_THEGJ/261-372      AC C5A5I8.1
#=GS A0A133V4S6_9EURY/237-350  AC A0A133V4S6.1
#=GS A0A133VGY5_9EURY/120-226  AC A0A133VGY5.1
#=GS A0A133UJ84_9EURY/237-350  AC A0A133UJ84.1
#=GS A0A8T8K252_9EURY/239-350  AC A0A8T8K252.1
#=GS A0A133VCL6_9EURY/122-227  AC A0A133VCL6.1
#=GS E3GY43_METFV/228-338      AC E3GY43.1
#=GS Q8U3J5_PYRFU/254-362      AC Q8U3J5.1
#=GS U6EBB7_9EURY/239-351      AC U6EBB7.1
#=GS A0A401HNG8_9EURY/209-317  AC A0A401HNG8.1
#=GS Q8TXH1_METKA/202-291      AC Q8TXH1.1
#=GS R9SJ33_9EURY/140-250      AC R9SJ33.1
#=GS C6A3F0_THESM/230-341      AC C6A3F0.1
#=GS W0I853_9EURY/257-368      AC W0I853.1
#=GS A0A328SBW7_9EURY/230-338  AC A0A328SBW7.1
#=GS D7DUR7_METV3/205-310      AC D7DUR7.1
#=GS A0A1V6N1B2_METAZ/35-151   AC A0A1V6N1B2.1
A0A133UE51_9EURY/240-353             .............................mt--FVVALAIRLVFSSV.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEK-DGKVR...RyESPGLKERAK....QIFMNPSSLR.LSq..dwDRVLAdSRLAAGVSEEQVEALKGYVEDDELEDHIRI.........
EPPA_METJA/207-313                   ..............................t-SIIYLCEIILISIVI.YA..LTG.VET.S.DKKHIEELKEGDILRDVIIIDKDG-VE...V.KNLNIMKRIK....FLLE-HEIKE.NE.....KEIIL.TD-GEGLSNEDIRKIKKLYMEGKIPDKLNV.........
A0A328SFB2_9EURY/229-329             .............................es--MILITAIVVKNIIK.DG..LLK.EAL.S.YEVKLDKLHESMIPSYNLIKK-DDKYL...F.DKRSLKEKIS....DNKD------.--.....CEYVI.TQKAHGLTDEDIGILKELNKKGLISDSIKI.........
A0A328SJ31_9EURY/208-310             .......siliylesfillslllttknvyhn----------------.-G..IIS.EVL.T.DEIDVSSLEEGMILKYPLYSN-EDAYY...F.DKSSFY----....------DLSK.EK.....GKLIC.SNNPRGVSKSDMELLRKY------------sptptvkik
A0A166DBK3_9EURY/269-372             .........................igflfs------FIFKIISSNF.RK..IAK.IGL.N.NKIAIDKLEEGMILDEIQINKDDD---...N.DIRGIVFKSN....SNIH--DS-N.QN.....LKLLK.SKSVAGLNKDDIKLLNRLYKNDLIDK----sipi.....
A0A133UAN0_9EURY/237-350             .............................it--FAVVLAIRLLFSGI.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEK-DGEVQ...RyESPGVMERAK....QILLNPSSFR.LSp..dwDRVLAdSRLAAGVSEEQVEALKSYVEKDDLENHIRI.........
F6BDF8_METIK/205-313                 ..............................s-SLIYVGELTLISIVI.YA..LMG.AEV.S.DKKAIGELKEGDILRDIIVLKDNGDVV...V.ENANLIKRIK....FLIDYEKGGK.KD.....YKLIF.TD-GEGLSEETIKLLKELHKNGKIPNELNV.........
A0A133VLJ9_9EURY/226-339             ...........................vafa----IAFGIRLIISSI.KV..VNR.HVL.Q.EKIPIDELEEGMIPAETIYEK-DGEVE...R.YESPGIKETA....SNIL-DDPTN.FRfrpdwDEVVSdSSLAAGVSQEQAESLKRLVGEGELENHIRI.........
A0A328SE80_9EURY/11-110              .....................niiaytiqla----VITALLIIKALFnRQ..VLR.RAM.S.DKIRLSQLIEGQILTYPLTKK-DNIYA...F.TDKSILARQK....ENKD------.--.....--III.DNMARGLTNDEIQLLWKLYSKD--------sy.......
A0A656YXC7_9EURY/129-235             ..............................n-SVIIVLPVFLIFALI.SK..IRG.EGI.FyNIVKISNLEEGMIPAEIIYEK-DGEFE...R.YEAGYLGFIS....RKVGTPDWD-.--.....RRLTD.PDKAAGVSQEQVDLLKELVEEEKLEDEIKI.........
A0A1D2W5B8_9EURY/239-351             ..............................a-IFLSITVIGIIRKLI.TS..VNR.KAL.Q.DDYEISDLKEGMIPAYNMYER-ADEVY...V.DDKGFFDKIK....ESLKNGDPTAgITa..hkGKLLI.SSMAAGLTEDNIILLKKLFEENKIDPKIKI.........
A0A1D3L212_9EURY/239-350             ..............................f-LLVSITFVNIVRKVL.TS..VSR.EAL.Q.DDYRISQLKEGMIPAYNMYEL-DGEIQ...I.DDTGFFSKAK....EAVKTGDISK.LSg..prGKLVV.GALAAGLQKKDIDYLKDILKEGKIEDNLRI.........
A0A133V6X1_9EURY/125-231             ......................nsvilaapa---------LLIYAVL.SR..LRGgGAF.Y.EEVKLSEIEEGMIPAEIIYEK-DGEIE...R.RSPGPLGFLT....ERLGNPDWDR.--.....-KLTS.PWKAAGFSPHDVEVLRELVRKGKLENRIRI.........
EPPA_METMP/209-316                   ..............................s-FFVYIGQLSLISLVI.YA..LTG.AEI.S.SKKQISDLKEGDIIRDIVTIKENGEVT...V.ENANILKRFK....HMIY-GEMGK.LE.....GKSLM.TD-GEGLSDENLELLNKLQNEGKIGGELNV.........
EPPA_METTH/240-350                   ..............................i-LWVSITVIQLIRKLL.TS..ITR.EAL.Q.DTMGVDELKEGMILASTLYRK-GDEYY...F.DDSSLLDRFR....TAARTGDVSA.LTy...rGEPVV.SAMAAGLREEEIETLRDLVSRGKIKDEFRI.........
Q5JED9_THEKO/255-365                 ..............................k-VLATIYAVKVLLSTA.KI..LRG.KVL.V.EEVPVEELHEWDILGETIHEL-NGEVK...R.EREGTIERFK....RALSTWDFSE.IRp..kvGRVVA.SPTAEGLTKEQIEELKKLVEEGKLENRF--l........
F0T697_METLA/244-355                 ..............................f-LFISINVIEIIKKLL.TS..VSK.QAL.E.EDYKIDELKEGMIPAYNLYEN-DDEIY...E.DKSTFFGRLK....QGISSGDVSK.LNg..pqDKLII.STMAAGLNTENIEYLKELRDKKKMKDNLKV.........
A0A133VJN6_9EURY/235-348             .............................fa--FVIVLGVRFIITSV.KV..VNR.EVL.Q.EEIPISELTEGMIPAEDIYVK-NGKAE..rY.EGPGFLERAK....NQLSDSSSKE.SRs..ewDKVLAdSSLAAGVSEEQAEELKKHVEKGEIEDRIRI.........
A0A133U6M7_9EURY/129-235             ..............................n-SVIIVLPVFLVFALI.SK..IRG.EGI.FyNIVKISDLEEGMIPAEIIYEK-DGEFE...R.YEAGYLGFIS....RKVKTPDWDR.--.....-RLTD.PDKAAGVTQEQVDVLKKLVEEEKLEDEIKI.........
C5A5I8_THEGJ/261-372                 ..............................k-LAVVLYLFKVFFSVV.RV..LRE.EAL.V.EEVTVEELGEWDILGETIYIE-NGEVR...R.ERSGFFELLV....RAIKEGDLSV.LTsp.vrGEVIA.SPTAEGLSREQIEKLKALVEEGKIENRF--l........
A0A133V4S6_9EURY/237-350             .............................mt--FVVALAIRLVFSSI.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEE-DGKVR...RyESPGLKERAK....QIFMNPSSLR.LSq..dwDRVLAdSRLAAGVSEEQVQALKGYVEDDELEDHIRI.........
A0A133VGY5_9EURY/120-226             ........................nsvlaai-------PVLLIYVLV.SR..LKG.FGIfY.ETKKISELEEGIIPAEIIYQK-NEEIE...R.YDAGPLGFLS....RKLSAPDWD-.--.....EKLTD.PDRAAGVTDENIEKLKQLVDEGKLEDRI--kt.......
A0A133UJ84_9EURY/237-350             .............................mt--FVVALAIRLVFSSI.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEE-DGKVR...RyESPGLKERAK....QIFMNPSSLR.LSq..dwDRVLAdSRLAAGVSEEQVQALKGYVEDDELEDHIRI.........
A0A8T8K252_9EURY/239-350             ..............................i-LFLVLTLIGIIKKLL.TS..VNK.EAL.Q.DDLKIKGLKEGMISAYSLYER-EGEYY...F.DEEGVLSKIK....SSAKKGDLTG.MSm..peGKLII.GTLAAGLTPDNIKLLMKLRDEGKIEDSFRV.........
A0A133VCL6_9EURY/122-227             ..................giiaaipflliyv-------------AVS.RA..MGR.GAF.Y.ETVKISELKEGMIPAEIIYEK-NGKIK...R.YDSGYFGFLS....RAFGTPEW--.-D.....RQLAN.PDRAAGISRYYVGVLRRMVREGKLKDRIKI.........
E3GY43_METFV/228-338                 ..............................s-IFITLLIFSFLLNFF.TR..IVT.EAL.R.DDVKVEDLKEGMILAYDLVEK-NGKIF...F.DSKPLKEKIK....ECLRMGNIGP.IIn...pGRILI.KSMAAGLSEKDIKLLEKLVKEKKLENKIKI.........
Q8U3J5_PYRFU/254-362                 ..............................r-LVIILYAFKLLLSSV.KM..LRK.EVL.T.KVKRVEELKEGEVLGERILEV-GGKIV...R.DRKDFFEKLN....EVLKSGKFEQ.IS.....GKEIA.GFSVEGLTKEQIEELKKLVSEGKLENEFLV.........
U6EBB7_9EURY/239-351                 ..............................i-LFVSINIVKTVIKLL.GS..VSK.KAL.Q.DDVPLDKLREGMIPAYNVYQQDDDEIF...V.DDKSFTQKLK....ESFKNKDPSL.ITt..pqGKRLV.GTLAAGLTDKDIDLLKKLNQEDKIPDEFRI.........
A0A401HNG8_9EURY/209-317             ..............................f-FVIYVFELILISLVI.YA..LTG.AEV.S.VKKPISQLKEGDILRDVIYIK-DGVAK...V.EEAGMWKRFK....LMLD-MEMGK.KGd...yDKIIL.TD-GDGLREEDIKLLQKLHREGNIS-----veelt....
Q8TXH1_METKA/202-291                 .........vlwevgiavalstafttyrwag----------------.--..---.---.-.KERNVEELREGEIPLEIVVRTEEG---...-.--TERVGRLK....GALL---VAT.GR.....AEPVV.VPSGDGFTEEELEKLKRL------------gidr.....
R9SJ33_9EURY/140-250                 rnikkanlknrikyeilffnlirstnsfsty----------------.--..---.---.-.-IKEINQLREGMILDTIIFTNKDQ--F...I.EIKNIIENKK....DSNLSCKIKD.-D.....KLYIK.CESSAGITDYDIQSLRELCNK-KIMD----krvf.....
C6A3F0_THESM/230-341                 .............................ki--ALTFYLFKTFFSLV.SI..MRV.EVL.T.KKVSVNELKEWDILGEWIYEK-DGKIQ...R.DREGSFDKLI....RALKTLNVNA.LRv..yyDKLIA.YPTAEGLTKENIEILKRLVEEEKLEDEFLV.........
W0I853_9EURY/257-368                 ..............................k-LLLVLYIFKVFFSIV.KV..LRE.EIL.I.EKKSVEELKEWDIPGEWIYEK-NGEIL...R.DRESFTDKFK....KALTTADLSL.LKp..syEDVIV.SPTAEGLTKEQIEKLKRLVEEGKLENEFI-v........
A0A328SBW7_9EURY/230-338             .....................niliyleelv-----ILSFTIMVKNI.YAtgLIK.EAL.T.EKTLKTSLEEGMILAYPLYCQ-DNKYY...F.DKSTLYTKVK....NHISGKDM--.--.....GKLVC.NTQASGLTIEDIFKIIEIDEIDKVP-----ik.......
D7DUR7_METV3/205-310                 ..............................n-YAVYGLELSLLSVVI.YA..LTG.AEI.S.IKKPISELKEGDIIRDIIIIN-GDNVS...V.NNSSLFKRIK....IMFN-AQIGK.IE.....GKVIN.LD-GEGLSNEDIDLIKDLNSKGKITD----vni......
A0A1V6N1B2_METAZ/35-151              ...................fsllskftskil-------------LKF.KK..IVK.YGS.K.KQIKIEYLKEGMIVDKLVINSFNSNNIasdV.NLEYLLTKFNlkneKNFYNISFKK.NK....nNYILT.SKTAAGLSKQDLLLIKKLFNNNMISK----tvsi.....
#=GC seq_cons                        ..............................s..hlhlh.ltllhthl.ps..lpp.csL.p.-chpIs-LcEGMI.u-hlYcc.-Gclh...h.-psuhhp+hK....ptlpsschsp.hp.....s+lls.sshAuGLocEpIchLKcLsccsKlcsch.l.........
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