#=GF ID Baculo_PEP_C
#=GF AC PF04513.15
#=GF DE Baculovirus polyhedron envelope protein, PEP, C terminus
#=GF AU Kerrison ND;0000-0002-1471-953X
#=GF SE DOMO:DM04337;
#=GF GA 38.00 38.00;
#=GF TC 38.00 40.50;
#=GF NC 37.90 37.30;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Coiled-coil
#=GF RN [1]
#=GF RM 8176372
#=GF RT Orgyia pseudotsugata baculovirus p10 and polyhedron envelope
#=GF RT protein genes: analysis of their relative expression levels and
#=GF RT role in polyhedron structure.
#=GF RA Gross CH, Russell RL, Rohrmann GF;
#=GF RL J Gen Virol 1994;75:1115-1123.
#=GF DR INTERPRO; IPR007601;
#=GF DR SO; 0001080; coiled_coil;
#=GF CC Polyhedra are large crystalline occlusion bodies containing
#=GF CC nucleopolyhedrovirus virions, and surrounded by an
#=GF CC electron-dense structure called the polyhedron envelope or
#=GF CC polyhedron calyx. The polyhedron envelope (associated) protein
#=GF CC PEP is thought to be an integral part of the polyhedron
#=GF CC envelope. PEP is concentrated at the surface of polyhedra, and
#=GF CC is thought to be important for the proper formation of the
#=GF CC periphery of polyhedra. It is thought that PEP may stabilise
#=GF CC polyhedra and protect them from fusion or aggregation [1].
#=GF SQ 20
#=GS A9YML0_9BBAC/161-319 AC A9YML0.1
#=GS A0A343RRP4_NPVMN/153-292 AC A0A343RRP4.1
#=GS Q8QLH4_9ABAC/165-308 AC Q8QLH4.1
#=GS A0A0B5A1H4_9ABAC/179-318 AC A0A0B5A1H4.1
#=GS A0A288QCZ6_9ABAC/143-290 AC A0A288QCZ6.1
#=GS Q9J889_9ABAC/183-321 AC Q9J889.1
#=GS A0A162GV09_9ABAC/150-289 AC A0A162GV09.1
#=GS A0A4R1RX39_9FIRM/6-136 AC A0A4R1RX39.1
#=GS Q8B9D1_NPVR1/165-309 AC Q8B9D1.1
#=GS D2J4I8_9BBAC/160-283 AC D2J4I8.1
#=GS A0A161CD63_9BBAC/161-320 AC A0A161CD63.1
#=GS VPHE_NPVOP/145-286 AC P17498.1
#=GS P87582_GVCPM/161-292 AC P87582.2
#=GS Q2NNW4_NPVHC/148-286 AC Q2NNW4.1
#=GS C3VP20_NPVBM/154-304 AC C3VP20.1
#=GS VPHE_NPVAC/167-252 AC P24728.1
#=GS A0A0R7EYP6_9BBAC/135-270 AC A0A0R7EYP6.1
#=GS A0A1S5YEC2_9BBAC/161-318 AC A0A1S5YEC2.1
#=GS A0A1D8QL45_GVTN/161-318 AC A0A1D8QL45.1
#=GS Q7T9Z8_GVAO/159-286 AC Q7T9Z8.1
A9YML0_9BBAC/161-319 ..............LADVQQIlaNGGGGGGGCD.LTGVLADLQTLLTQ...V-AALTTTVNTIAGQIDTISTDVG...GLVTAVANlstqidNINTSLINLTVSINALNnsvDIINNRLDTLETNVGSLLASVTNLVNSIAGLVTDVGNI..........ANGLAALEATVAANT.........TT-----lnvlnanvqlildi
A0A343RRP4_NPVMN/153-292 ..............INALNQL..SVSNSNQHLD.IINQLNAIRLQNST...TSSQLTTIIDLFENQLGSLIKDLN...KLLSDLDT......RFENILETINTALAQFQ...TTIRNELTNVNAVLNNLASSVTNINATLNNILQILNNL..........DVGALNARLDTIVGL.........LNDILS-m.............
Q8QLH4_9ABAC/165-308 ..............LNNLNQL..TVNNANQHLE.LSNVLNAIRLQNVN...IAAQIAQILDIVENQLGGIGGDIE...RLLAELDA......RFTALTNALTAAIAQLS...DQLRNELTNINSILNNLTSSVTNINATLNNLLQAINGL..........DIGDLITELTNTINT.........ILSQL--etilgi........
A0A0B5A1H4_9ABAC/179-318 ..............LSTLNQL..SLNNSNQHLE.LTNILNAIRLQNVA...IAAQLTQLIETIDSQLGELTTDLR...RLLNELDT......RFAALTAALTNAIAQLQ...DSIRGDLIGINSILNNLTSSVTNINATLNNLLQAVNGL..........NIEGLTTLLNTILAL.........LEEILG-i.............
A0A288QCZ6_9ABAC/143-290 ..............VNGVNQI..TLNQSNQFLE.LSNTLCAVRAQNAQ...ILTTLECVKDTILNRLNALICEIK...TQFPDQSA......QLEQMTATLLEAINAVQ...LTLKSELNNTNSILTNLASSITNINTTLNNVLAAIENIsd......ggGGGGLTDEEHETLNS.........ISDLVT-dikni.........
Q9J889_9ABAC/183-321 ..............LTSVNQL..TVTNANQHLE.LSNILNALRLQQTT...IAGQVAQILETVEG-LGDITGDFT...RLLAELDT......RLAALSTTILNAINQLS...DQLRNELTGINSVLNNLSSSVTNINATLNNLLQAINGL..........NLGTVVGELQQTINT.........ILDLLQ-t.............
A0A162GV09_9ABAC/150-289 ..............LINLTQL..SINNSNQHLE.ITNLLNSIKLQNVQ...ILNNVSQILELIETQFNELSTELT...TLLRNLNN......QLNSLTEQLTNAIAQLQ...DTLRNELLNINSILNNLVSSITNINTTLNNVLQILNNL..........NLGNINSVLQEVLTL.........LQEIID-a.............
A0A4R1RX39_9FIRM/6-136 fqdlvlehlarltq-------..---------E.VTGIHSDIDELKTD...V-TGLKTDVAALRTDVDGLKTEVT...GLKKDVN-......ELKTDVAGLKTDVAALRtdvDELKTEVTGLKKDVSELRADVTGLKTDVAVLRTDVDGL..........KIDL-----------.........-------ekvkgsvihi....
Q8B9D1_NPVR1/165-309 ..............MSNVNQI..NLNQTNQFLE.LSNMMTGVRNQNVQ...LLAALETAKDVILTRLNTLLAEIT...DSLPDLTS......MLDKLAEQLLDAINTVQ...QTLRNELNNTNSILTNLASSVTNINGTLNNLLAAIENLig.....gggGGGNFNEADRQKLDL.........VYTLVN-e.............
D2J4I8_9BBAC/160-283 ..............LNDVQQI..LNNGGGGTVD.LTPVLNAI------...--ADLSNLVGTLQTSINLLSVDLT...N----LQT......NVDNQFSLLNAAVAAIN...----TALVTLQNDVSTITAAIPNIETALADIINALNIF..........TEGVITQWGSATWDQ.........TRFP---ips...........
A0A161CD63_9BBAC/161-320 ..............LADVEQIlaNGGGGGGGCD.LTGVLADLQTLLTQ...V-AALTTTVNTLAGQVTDISTDVG...QLVTAVANltnqidNINTSLVNLNVSVNALTnsvDIINTRLDTLEANIGTLLANVATLVDSIAGLVTDVSNI..........ANGLAALEATVAANTntlnvlnanV------qlildil.......
VPHE_NPVOP/145-286 ..............VNSLNQI..SLNQSNQFLE.LSNTLNTVRAQNAQ...ILAALETTKDAILTRLNALVDDIK...AALPDQSA......QLQELADKLLDAINSVA...QTLRGEMNNTNSILTNLASSITNINSTLNNLLAAIEGIg........gDGGGLGDADRQALNE.........VLSLVT-e.............
P87582_GVCPM/161-292 .............l-LELQQL..INNGGGGTVD.LTPVLDAI------...--AALATQVTDLQTTLTDLQTALT...QLAT----......DVGDLTTNIDTQLAALTtlvQDLSTAITNLQTDVTTLVNALPNIETALSGMINALNAF..........IAGAVAQWGADTWDT.........GAHPVD-si............
Q2NNW4_NPVHC/148-286 ..............VNGINQI..SLNQSSQFLE.LSNALNTLKTQSAQ...ILAAIEASKDALLVRLNALIDEIK...NALPDLTG......QLDNLAKELIDAINGVS...QTLRSELNNTNSILTNLASSITNINGTLNNLLNAVENI..........-EGGLSPADSQKLND.........VLDLVT-e.............
C3VP20_NPVBM/154-304 ..............MNNVNQI..NLNQTNQFLE.LSNVMTGVRNQNVQ...LLAALETAKDVILTRLNTLLSEIT...DSLPDLTL......MLDKLAEQLLEAINTMQ...QTQRNELNNTNSILTNLASSITNINGTLNNLLTAIENLagggggggggGGGNFNEADRQKLDL.........VHTLVN-di............
VPHE_NPVAC/167-252 ..............MSNVNQI..NLNQTNQFLE.LSNMMTGVRNQNVQ...LLAALETAKDVILTRLNTLLAEIT...DSLPDLTS......MLDKLAEQLLDAINTVQ...QTCA----------------------------------..........---------------.........-------ts............
A0A0R7EYP6_9BBAC/135-270 ............gc-------..--GSGGKCCDaLNAILLTLQNNTATlqlILSQLGTDTSAILAAVAALQTTVNgitSSLATLTT......TIETGLGDLDTAIATLT...----TNVATLQTDVTTLVNALPDIQTALSGIIDGLNSF..........ITGAVAQWGATTWDT.........TTHPVP-s.............
A0A1S5YEC2_9BBAC/161-318 ..............LADVQQI.lANGGGGGTCD.LTEVLAELQALLAQ...V-AALTTTVNTILAEITTLSTDVA...GLLTAVANlttqidNINTTLVSLSVSVEAINnniGLINTRLDSLETNVGSLLASVAGLVDSIAGLVSEVANI..........ANGLAALETAVAANTaalntisadV------qlilsi........
A0A1D8QL45_GVTN/161-318 ..............LADVQQIlaNGGGGG-GCD.LTGVLADLQTLLTQ...V-AALTTTVNTIAGQINTISTDVG...GLVTAVANlstqidNINTSLVNLTVSVNALTnsvDIINTRLDTLETNVGSLLASVANLVNSIAGLVTDVGNI..........ANGLAALEATVAANTnt....lniL------nanvqlildi....
Q7T9Z8_GVAO/159-286 ..............LIDVQKL..LAGGGGGGGD.LTPVLNAI------...--SDLQTLITNNQNVLSDAISALQ...S-------......GVDTNFANLDSKLNTLNdavTAATNAITSLQNDVNNLLTNMTNTQTGLTNVITTLNAY..........ISGAIAQWGATSWDT.........TTHPVP-t.............
#=GC seq_cons ..............lsslpQl..shssusptl-.LoslLsulctppsp...l.AsLsTslssltspLssLts-ls...shLsslss......plsshsssLssAIssls...pplpscLsslpo.lssLsuSlTNIssoLssLlsslssl..........ssGslsttsspshsp.........l.p.l..p.............
//
