#=GF ID CAP-like_CFAP184
#=GF AC PF23448.1
#=GF DE CFAP184 CAP-like domain
#=GF AU Chuguransky S;0000-0002-0520-0736
#=GF SE AlphaFold prediction
#=GF GA 27.00 27.00;
#=GF TC 27.10 27.80;
#=GF NC 26.80 22.70;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 81514348 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF CL CL0659
#=GF RN [1]
#=GF RM 33661892
#=GF RT Ccdc113/Ccdc96 complex, a novel regulator of ciliary beating
#=GF RT that connects radial spoke 3 to dynein g and the nexin link.
#=GF RA Bazan R, Schrofel A, Joachimiak E, Poprzeczko M, Pigino G, Wloga
#=GF RA D;
#=GF RL PLoS Genet. 2021;17:e1009388.
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This entry represents a domain found in Cilia- and
#=GF CC flagella-associated protein 184 (also known as CCDC96,
#=GF CC SwissProt:I7M6D6) from Tetrahymena thermophila and similar
#=GF CC sequences. CFAP184 forms a complex with CFAP263, and acts as a
#=GF CC regulator of ciliary beating that connects radial spoke 3 (RS3)
#=GF CC to the inner dynein arm (IDA) and the nexin-dynein regulatory
#=GF CC complex (N-DRC) [1]. This domain may have a CAP-like
#=GF CC (cysteine-rich secretory proteins, antigen 5, and
#=GF CC pathogenesis-related 1 proteins) fold according to structure
#=GF CC predictions and comparison.
#=GF SQ 17
#=GS A0A8S1SZV1_PAROT/22-157 AC A0A8S1SZV1.1
#=GS I7M6D6_TETTS/113-243 AC I7M6D6.1
#=GS A0DYC6_PARTE/105-239 AC A0DYC6.1
#=GS A0A8S1KZ72_9CILI/569-710 AC A0A8S1KZ72.1
#=GS A0A8S1SRE8_9CILI/107-241 AC A0A8S1SRE8.1
#=GS A0A8S1KZ72_9CILI/105-246 AC A0A8S1KZ72.1
#=GS G0QTH2_ICHMU/121-251 AC G0QTH2.1
#=GS A0A8S1SE96_PAROT/105-239 AC A0A8S1SE96.1
#=GS G0R1X6_ICHMU/50-183 AC G0R1X6.1
#=GS A0A0V0R9M6_PSEPJ/123-254 AC A0A0V0R9M6.1
#=GS A0A8S1SZT3_9CILI/107-241 AC A0A8S1SZT3.1
#=GS A0A8S1KPP3_9CILI/104-245 AC A0A8S1KPP3.1
#=GS A0A078B1C9_STYLE/83-211 AC A0A078B1C9.1
#=GS A0BIG5_PARTE/22-157 AC A0BIG5.1
#=GS A0A8S1K0K3_PARPR/580-666 AC A0A8S1K0K3.1
#=GS A0A8S1K1J6_PARPR/107-241 AC A0A8S1K1J6.1
#=GS A0A8S1K0K3_PARPR/107-241 AC A0A8S1K0K3.1
A0A8S1SZV1_PAROT/22-157 ..................dse--KVLTKVKRDLLENVNLIRREKKLNQLYIELIPDIVAERYASHLLEN......G...HTD.AELK............KLIGfyKYDEkiLDDIKLIYIVS.KFEEDTIPHAQVIYDYFMEIGQLFFEVEEDRKILLSNQMNHISIGVSYDDNQVAIV.......
I7M6D6_TETTS/113-243 .....................DDETLRKIRRDLLDNINLERRHRDLQPVYIDLTTNNISQYYSEYLVNN......E...HNQ.DFYE............NAKV..RYNN..LGECELCHITA.KFEPDADITKEYIYDYFMEIGYLFLESEEEKRIILNPANNHIGIGVFFDEIQIVVV.......
A0DYC6_PARTE/105-239 ....................p-DEILRKVKRDLLENVNRIRREKKLNQLYIELMPAIVAERYASHLLDN......D...HSD.AEFK............KLIEfyKYNEkkLDDLKLIYIVS.KFEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAIV.......
A0A8S1KZ72_9CILI/569-710 ....................q-DEILRKVKRDLLDNVNRVRKDKKLNPLYIELMPAIVAERFASYLLDDndgeldD...KNQkNEYK............KLIDfyKYNEkkLDDLKIIQIVS.KFEEDVVPDAQVIYDYFMEMGYLFFEVEDDRKTLLSNEMNHIAIGVACDDNQIAIV.......
A0A8S1SRE8_9CILI/107-241 ....................p-DEILRKVKRDLLENVNRIRREKKLNPLYIELMPAIVAERYASHLLDN......D...HSD.AEFK............KLIEfyKYNEkkLDDLKLIYIVS.KFEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAIV.......
A0A8S1KZ72_9CILI/105-246 ....................q-DEILRKVKRDLLDNVNRVRKDKKLNPLYIELMPAIVAERFASYLLDDndgeldD...KNQkNEYK............KLIDfyKYNEkkLDDLKIIQIVS.KFEEDVVPDAQVIYDYFMEMGYLFFEVEDDRKTLLSNEMNHIAIGVACDDNQIAIV.......
G0QTH2_ICHMU/121-251 .....................DDDFLRKVKRELLQHLNQERKVKTLNQLYIDLTTNIIAHDYSQFLLNN......D...HSN.DFFE............SLKE..RNLN..DGQTELCFIAA.RYEEDVDITQQYIYDYFMEIGYLFFECEVEKKILMNPQNNHIGIGVATDEIQIVIV.......
A0A8S1SE96_PAROT/105-239 ....................p-DEILRKVKRDLLENVNRIRREKKLNQLYIELMPAIVAERYASHLLDN......D...HSD.AEFK............KLIEfyKYNEkkLDDLKLIYIVS.KFEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAIV.......
G0R1X6_ICHMU/50-183 .....................DEQFLKKAKKAILKNINDIRQQKNLQIFEVDGLYNIINQQYSQFLLNN......K...QDN.NFYElmqiyiytylfqQKNR..KQKNqiLQDSQLCFISA.QYEQEQVLSEQYIYNYIIELGYLFLESEQDRVHLLSNNNN----------------iykqq..
A0A0V0R9M6_PSEPJ/123-254 .....................DDDELRKIRRDLLDNLNKERKARNMEPMYPELLSNMVANRYAQFLVDS......E...HNQ.QYFS............QLLE..KQHN.fQGDYHLCFIQA.NYEVDVVKDKNYIFNYFMEMGYLFLEDQNDKQHILNPEINHIGLGVSLDKDKIVIV.......
A0A8S1SZT3_9CILI/107-241 ....................p-DEILRKVKRDLLENVNRIRREKKLNPLYIELMPAIVAERYASHLLDN......D...HSD.AEFK............KLIEfyKYNEkkLDDLKLIYIVS.KFEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAIV.......
A0A8S1KPP3_9CILI/104-245 ....................q-DEILRKVKRDLLDNVNRVRKDKKLNPLYIELMPAIVAERFASYLLDDndgeldD...KNQkNEYK............KLIDfyKYNEkkLDDLKIIQIVS.KFEEDVVPDAQVIYDYFMEMGYLFFEVEDDRKTLLSNEMNHIAIGVACDDNQIAIV.......
A0A078B1C9_STYLE/83-211 ....................l--DRMRKIRRDIVRTINDYREAQQTPGIYLDILSNKAAAEYAEYLLEN......E...EDP.NVVQ............DILN..KHLI..VGSVVVCVGYS.YLEED-DVDDRVLHHEFMDAHGLLCELGEELDKLLDPKITHAGIGFSWNKQQVKVV.......
A0BIG5_PARTE/22-157 ..................dse--KVLRQVKRDLLENVNLIRRQKKLNQLYIELITDFVAERYASHLLEN......D...HTE.AELK............KLIGfyKYNEkiLDDIKLIYIVS.KFEEDTIPDAQVIYDYFMEIGQLFFEDEEDRKILLSNEMNHISVGVSCDDNQVAIV.......
A0A8S1K0K3_PARPR/580-666 knktlqelrldtlrlkntlak------------------------------------------------......-...---.----............----..----..-NQKQLKKKEE.LAEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAIV.......
A0A8S1K1J6_PARPR/107-241 ....................p-DEILRKVKRDLLENVNRIRREKKLNPLYIELMPAIVAERYASHLLDN......D...HSD.AEFK............KLIEfyKYNEkkLDDLKLIYIVS.KFEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAI-q......
A0A8S1K0K3_PARPR/107-241 ....................p-DEILRKVKRDLLENVNRIRREKKLNPLYIELMPAIVAERYASHLLDN......D...HSD.AEFK............KLIEfyKYNEkkLDDLKLIYIVS.KFEEDTIPDAQVIYDYFMEMGYLFFEVEDDRKILLSNEMNHISIGVSCDDNQVAIV.......
#=GC seq_cons ......................D-lLRKVKRDLL-NVNclR+cKKLN.LYIELhssIVAERYASaLL-N......D...Hsp.sEaK............KLI-FYKYNEKhLDDlKLIaIVS.KFEEDslPDAQVIYDYFMEMGYLFFEVE-DRKILLSNEMNHIuIGVSCDDNQlAIV.......
//
