#=GF ID Caudo_bapla_RBP
#=GF AC PF08931.16
#=GF DE Lactophage receptor-binding protein C-terminal head domain
#=GF PI DUF1913;
#=GF AU Bateman A;0000-0002-6982-4660
#=GF AU Mistry J;0000-0003-2479-5322
#=GF AU Sammut SJ;0000-0003-4472-904X
#=GF SE pdb_1zru, pdb_2x54_A
#=GF GA 26.70 26.70;
#=GF TC 26.70 31.80;
#=GF NC 26.50 25.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 90746521 --cpu 8 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF CL CL0326
#=GF RN [1]
#=GF RM 20351260
#=GF RT Structure of lactococcal phage p2 baseplate and its mechanism of
#=GF RT activation.
#=GF RA Sciara G, Bebeacua C, Bron P, Tremblay D, Ortiz-Lombardia M,
#=GF RA Lichiere J, van Heel M, Campanacci V, Moineau S, Cambillau C;
#=GF RL Proc Natl Acad Sci U S A. 2010;107:6852-6857.
#=GF DR INTERPRO; IPR015027;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Caudo_bapla_RBP is a family of proteins expressed from ORF18 of
#=GF CC the Lactococcus P2-like phage. This is one of three protein
#=GF CC domains, shoulders, neck, and head, that form the phage tail
#=GF CC base-plate. In the overall structure this head domain exists as
#=GF CC six trimers, and is necessary for specific recognition of the
#=GF CC receptors at the host cell surface. Siphoviridae are the P2-like
#=GF CC Caudovirales of Lactococcus [1]. This family now includes
#=GF CC DUF1914. Family Baseplate, Pfam:PF16774, is the ORF15 or
#=GF CC shoulder component of the base-plate complex.
#=GF SQ 29
#=GS A0A650ETE5_9CAUD/156-252 AC A0A650ETE5.1
#=GS A0A650ESP7_9CAUD/155-257 AC A0A650ESP7.1
#=GS A0A1P8BKW1_9CAUD/515-612 AC A0A1P8BKW1.1
#=GS A0A343JNI7_9CAUD/162-263 AC A0A343JNI7.1
#=GS R9R109_9CAUD/164-264 AC R9R109.1
#=GS A0A343JQ88_9CAUD/156-252 AC A0A343JQ88.1
#=GS Q9G096_9CAUD/65-163 AC Q9G096.1
#=GS A0A343JQD9_9CAUD/164-264 AC A0A343JQD9.1
#=GS A0A649V3E9_9CAUD/33-141 AC A0A649V3E9.1
#=GS T0TRR4_LACLC/225-323 AC T0TRR4.1
#=GS A0A154VWE8_9PROT/186-286 AC A0A154VWE8.1
#=GS A0A1P8BMR1_9CAUD/245-343 AC A0A1P8BMR1.1
#=GS Q38319_9CAUD/1801-1898 AC Q38319.1
#=GS T0TE33_LACLC/371-467 AC T0TE33.1
#=GS R9R237_9CAUD/164-264 AC R9R237.1
#=GS RBP_BPLSK/164-264 AC O21886.1
#=GS Q71AV4_BPLP0/162-263 AC Q71AV4.1
#=GS A0A1B1IMU4_9CAUD/245-343 AC A0A1B1IMU4.1
#=GS Q8LTP7_9CAUD/67-151 AC Q8LTP7.1
#=GS A0A105TQM8_9PSED/162-263 AC A0A105TQM8.1
#=GS A0A126H9U6_9CAUD/169-269 AC A0A126H9U6.1
#=GS A0A3P1ZUL7_9NEIS/1-53 AC A0A3P1ZUL7.1
#=GS A0A126HC23_9CAUD/164-264 AC A0A126HC23.1
#=GS A0A649V342_9CAUD/164-264 AC A0A649V342.1
#=GS C7T2G5_9CAUD/169-269 AC C7T2G5.1
#=GS A0A649V246_9CAUD/65-163 AC A0A649V246.1
#=GS H9ED21_9CAUD/156-252 AC H9ED21.1
#=GS Q71AV2_9CAUD/162-263 AC Q71AV2.1
#=GS Q77MU1_9CAUD/245-343 AC Q77MU1.1
A0A650ETE5_9CAUD/156-252 ..t-YGSLVIGNGITLSWQKKA-DIVEIKWIGRLT.N.INAG.A.TFA-......-..-VKAPFQiiPDKTKELVGHFANTSNSFH........IDLEPDGTFRWWGDNKANGSI--RGTS......VYFIK......
A0A650ESP7_9CAUD/155-257 ...NSFGALAGVNLLDNWYVQEMAGGLYR-LSRTI.N.VNHG.-.-VDQ......P..WGSL-YIsaEIGIPSLPRGF--SQSYIS........VSMSNTSNLMWCSVTSNNAFRLLTGRStsgavrSVL--ve....
A0A1P8BKW1_9CAUD/515-612 .sy--NSLQIGAGITINLERRG-DIVEATLSGSIN.Y.PLTSnT.KFSV......G..LIPVGYR..PNRTAYIMVHMTGSINSSH........IDVEPNGVCTWWGTSTNTGAP--RGH-......-----qlwft.
A0A343JNI7_9CAUD/162-263 ...TDLNRASGVGSTGILQARIINGVIYVRGNSIP.V.PNVA.P.NFLV......P..VGTFP--..PAFGTNLP-QFDTVGTFYSpgnlslslISMSPSG---IAVGNPNNTSM--NGKT.....iSFAL-s.....
R9R109_9CAUD/164-264 ...QTSTVQTAPGLQLQLTKKNDDLVIVRFLGSVA.N.IKKG.Q.TMSR......T..WVDEPFR..PAIVQSLIGHLIGKDAIFH........IDINPDGSITWWGEDVGSHPFSSRGNA......SYFIK......
A0A343JQ88_9CAUD/156-252 ..k-SGSLSIGNGITFSWQKKG-EIVEIKWIGRLT.N.INSG.T.VFA-......-..-VKAPYEviPNKTKELVGHFANTGKSFH........IDLEPDGTFRWWGENQANGSI--RGTA......MYFIK......
Q9G096_9CAUD/65-163 ..k-SWSGELGGGIILSLRKKG-TTVEYSIGGEIS.SsILAN.S.NLVN......R..SVPNEFC..PRNRCSLVGHMVGGWNAFH........IDIPSSGVCQWFGPTASSGTP--RGTG......TYP--id....
A0A343JQD9_9CAUD/164-264 ..e-MLTVQTAPGLQLQLTKKNDDLVIVRFLGSVA.N.IKKG.Q.TMSR......T..WVDKPFR..PSVAQSLIGHLVGKDSIFH........IDINPDGSITWWGEDIGSNPLSSRGNA......SYFIK......
A0A649V3E9_9CAUD/33-141 ..t-SATLNIGNGLIIKFTKKGLGIVQAEFKGELK.A.VKPG.E.EMRDnkgtslPwvWVSQNFC..PPETISLAGHLAGANNSFH........IDIEPTGRVVWWGPVLSVSGETPRGTV......LYFA-k.....
T0TRR4_LACLC/225-323 ..k-TTSVTIGAGLILSLERRG-ETVIAILLGTINsS.LTSG.Q.QFGV......G..KIPLGYR..PNTTANIPAHMTSSYNGAH........IDAGIDGVCTWWGPSTNTGYP--RGSQ......-----mwftn.
A0A154VWE8_9PROT/186-286 ...QMLTIQTGNGMQLQFTKKNDDLVIVRLFGSVS.T.TKAG.I.KMSG......P..WVDKEFR..PAVVQSIVGHFAGHETSFH........IDIDTNGSITWWGPDIGKTPIATRGNG......SYFIK......
A0A1P8BMR1_9CAUD/245-343 ..k-SWSGELGGGITLSLRKKG-TTVEYSIGGEISsN.ILAN.S.NLVN......L..SVPNEFR..PRNRYSLVGHMAGGWNAFH........IDIPSSGVCQWFGPATKSGTP--RGTG......TYP--id....
Q38319_9CAUD/1801-1898 syn---SFQIGAGITINLERRG-DIVEATLSGSIN.Y.PLTS.HtKFSV......G..LIPVGYR..PNRTAYIMVHMTGSINSSH........IDVEPNGVCTWWGTSTNTGAP--RG--......-----cqmwft
T0TE33_LACLC/371-467 ise---TVNIGNGMSLNFQRKG-EFVLVRFSGSLT.A.IDRG.T.YFSS......A..VPDQ-WR..PDGIKELIGHFASGALAFH........VDLETDGRVKWWGASGATGAP--RGTA......MYFLK......
R9R237_9CAUD/164-264 ..e-MSTVQAAPGLQLQLTKKNDDLVIVRFLGSVA.N.IKKG.Q.TMSR......T..WVDKPFR..PAVVQSLIGHLVGRNAVFH........IDINPDGSITWWGEDIGSNSLSARGNA......SYFIK......
RBP_BPLSK/164-264 ...QTLTVEAGNGLDLQLTKKNNDLVIVRFFGSVS.N.IQKG.W.NMSG......T..WVDRPFR..PAVVQSLVGHFAGRDTSFH........IDINPNGSITWWGESIDNTPIATRGNG......SYFIK......
Q71AV4_BPLP0/162-263 ...TDLNRASGVGSTGILQARIINSVIYVRGNSIP.V.PNVA.P.NFIV......P..VGTFP--..PAFGTNLP-QFDTAGTFYShgnlslslINMSPSG---IAVGNPNNTSM--NGKT.....iSFVL-s.....
A0A1B1IMU4_9CAUD/245-343 ..k-SWSGQLGGGITLSLRKKG-TTVEYSIGGEISsN.ILAN.S.NLVN......L..SVPNEFR..PRNRCSLVGHMAGRWDSFH........IDIQSSGACQWFGPIVNRGTP--RGTG......TYP--id....
Q8LTP7_9CAUD/67-151 .ks------------GSWFVENLDGNMYR-LTTII.S.VDKG.-.-IDQ......P..WGSL-YLsaETQHPDLPAGF--TKTGFT........VSVSKTNNLMWSSVSGPSTFRLISG--......-----vntag.
A0A105TQM8_9PSED/162-263 ...TDLNRAGGVGSTGILQARIINGVIYVRGNSIP.V.PNVA.P.NFIV......P..VGTFP--..PAFGSNLP-QFDSVGTFYSpgnlslslISMSPSG---IAVGNPNKTSM--NGKT.....iSFAL-s.....
A0A126H9U6_9CAUD/169-269 ...QKWTVQTTNGLILQFTKKNNDLVIVQFSGEVT.L.TASG.K.IMGG......T..WVDFPYR..PSSIQSLVGHLAGSGNSFH........VDINPDGSITWWGPYVGYDAVTPRGNA......SYFIK......
A0A3P1ZUL7_9NEIS/1-53 ...--------------------------------.-.----.-.----......-..-----FR..PAVVQSIVGHFAGHETSFH........IDIDTNGSITWWGPDIGKTPIATRGNG......SYFIK......
A0A126HC23_9CAUD/164-264 ..e-MSTVQAAPGLQLQLTKKNDDLVIVRFLGSVA.N.IKKG.Q.TMSR......T..LVDKPFR..PAVVQSLVGHLVGTNAVFH........IDINPDGSITWWGGDIGSEPLSSRGNA......SYFIK......
A0A649V342_9CAUD/164-264 ...QTLTVEAGNGLQLQLTKKNNDLVIVRFFGSVA.N.IKTG.W.NMSG......T..WVDRPFR..PAVVQSIVGHFAGRDTCFH........IDINPDGSITWWGANIDSNARTPRGNG......SYFIK......
C7T2G5_9CAUD/169-269 ...QKWTVHTSNGLILKFTKKNNDLVIVEFAGEVT.L.TATG.L.MMGG......T..WVDGPYH..PSVTQSLVGHLAGSGDSFH........VDINPDGSIIWWGPYVGYTPVTPRGNA......SYFIK......
A0A649V246_9CAUD/65-163 .ks--WHGELGGGIILSLRKKG-TTVEYSIGGEIS.SsILAN.S.NLVN......L..SVPNEFC..PRNRCSLVGHMVGGWNAFH........IDIPSSGVCQWFGPTASSGTP--RGTG......TYP--id....
H9ED21_9CAUD/156-252 ..k-SGSLSIGNGITFSWQKKG-EIVEIKWVGRLT.N.INSG.T.VFA-......-..-VKAPYEviPNKTKELVGHFANTEKSFH........IDLEPDGTFRWWGENQANGYI--RGTA......MYFIK......
Q71AV2_9CAUD/162-263 ...TDLNRAGGVGSTGTLQARIINGVIYVRGNSIP.V.PNVA.P.NFIV......P..VGTFP--..PAFGTNLP-QFDTAGTFYSpghlslslINMSPSG---IAVGNPNNTSM--NGKT.....iSFAL-s.....
Q77MU1_9CAUD/245-343 ..k-SWSGELGGGITLSLRKKG-TTVEYSIGGEISsK.ILVN.S.NLVN......L..SVPNEFC..PRNRCSLVGHMAGGWNAFH........IDIPSSGVCQWFGPTASSGTP--RGTG......TYP--id....
#=GC seq_cons ....phohphGsGlplpLpKKs.shV.hphhGpls.s.lpsu.t.shss......s..hVstsac..PshspsLlGHhsGstsuFH........IDlsPsGshpWWGsssssssh..RGsu......oYhl.......
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