GenomeNet

Database: Pfam
Entry: CoV_NSP2_C
LinkDB: CoV_NSP2_C
Original site: CoV_NSP2_C 
#=GF ID   CoV_NSP2_C
#=GF AC   PF19212.2
#=GF DE   Coronavirus replicase NSP2, C-terminal
#=GF PI   Corona_NS2_C;
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   Bateman A
#=GF GA   25.00 25.00;
#=GF TC   37.00 63.30;
#=GF NC   23.80 21.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   16227261
#=GF RT   The nsp2 replicase proteins of murine hepatitis virus and severe
#=GF RT   acute respiratory syndrome coronavirus are dispensable for viral
#=GF RT   replication.
#=GF RA   Graham RL, Sims AC, Brockway SM, Baric RS, Denison MR;
#=GF RL   J Virol. 2005;79:13399-13411.
#=GF DR   INTERPRO; IPR043613;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry corresponds to a presumed domain found at the
#=GF CC   C-terminus of Coronavirus non-structural protein 2 (NSP2). NSP2
#=GF CC   is encoded by ORF1a/1ab and proteolytically released from the
#=GF CC   pp1a/1ab polyprotein. The function of NSP2 is uncertain. This
#=GF CC   presumed domain is found in two copies in some viral NSP2
#=GF CC   proteins. This domain is found in both alpha and
#=GF CC   betacoronaviruses.
#=GF SQ   133
#=GS R1A_BC512/741-897         AC P0C6F6.1
#=GS R1A_CVH22/436-594         AC P0C6U2.1
#=GS B1PHI6_9ALPC/736-892      AC B1PHI6.1
#=GS A0A1X9JQL5_9ALPC/413-574  AC A0A1X9JQL5.1
#=GS A0A0A7UXR0_9BETC/671-834  AC A0A0A7UXR0.1
#=GS A0A125R5A3_9ALPC/731-879  AC A0A125R5A3.1
#=GS E0ZN59_BCHK9/608-772      AC E0ZN59.1
#=GS H9TEX0_9ALPC/425-584      AC H9TEX0.1
#=GS R1A_CVMJH/671-832         AC P0C6V1.1
#=GS A0A0U1UZ20_9ALPC/434-592  AC A0A0U1UZ20.1
#=GS A0A0U1WHG1_9ALPC/616-771  AC A0A0U1WHG1.1
#=GS R1A_CVMA5/671-832         AC P0C6V0.1
#=GS E0ZN51_BCHK9/608-772      AC E0ZN51.1
#=GS R1AB_CVHOC/678-851        AC P0C6X6.1
#=GS B1PHK0_9ALPC/434-592      AC B1PHK0.1
#=GS A0A0U1WHK4_SARS/652-818   AC A0A0U1WHK4.1
#=GS B7U2M9_9BETC/678-851      AC B7U2M9.1
#=GS R1AB_CVMA5/671-832        AC P0C6X9.1
#=GS Q06BE1_9BETC/678-851      AC Q06BE1.2
#=GS R1A_BC279/652-818         AC P0C6F5.1
#=GS A3EXI9_BCHK9/608-772      AC A3EXI9.1
#=GS A0A125R5A4_9ALPC/731-879  AC A0A125R5A4.1
#=GS Q0PL14_9ALPC/425-584      AC Q0PL14.1
#=GS A3EXA2_BCHK4/676-847      AC A3EXA2.1
#=GS H9BZX6_9BETC/671-832      AC H9BZX6.1
#=GS A0A0U1UZ65_BCHK4/676-847  AC A0A0U1UZ65.1
#=GS R1AB_SARS2/652-818        AC P0DTD1.1
#=GS A0A0U1WHG4_9ALPC/434-592  AC A0A0U1WHG4.1
#=GS H9AA60_9BETC/670-841      AC H9AA60.1
#=GS A0A0P0LKV0_CVH22/736-895  AC A0A0P0LKV0.1
#=GS H9TEW9_9ALPC/731-879      AC H9TEW9.1
#=GS A0A125R5A4_9ALPC/425-584  AC A0A125R5A4.1
#=GS U5LR11_9BETC/685-859      AC U5LR11.1
#=GS A0A0U1UZC3_9ALPC/630-787  AC A0A0U1UZC3.1
#=GS B1PHK1_9ALPC/735-891      AC B1PHK1.1
#=GS U5KNA9_9BETC/685-859      AC U5KNA9.1
#=GS A0A0U1WHG1_9ALPC/430-587  AC A0A0U1WHG1.1
#=GS T2B9I2_MERS/679-853       AC T2B9I2.1
#=GS A0A0U2UMS4_9ALPC/731-879  AC A0A0U2UMS4.1
#=GS R1AB_BC512/438-596        AC P0C6W0.1
#=GS B1PHI7_9ALPC/736-892      AC B1PHI7.1
#=GS R1AB_CVH22/738-897        AC P0C6X1.1
#=GS T2B9U0_MERS/679-853       AC T2B9U0.1
#=GS A0A0U1UZ20_9ALPC/735-891  AC A0A0U1UZ20.1
#=GS B1PHI7_9ALPC/433-590      AC B1PHI7.1
#=GS R1AB_BCHK5/677-851        AC P0C6W4.1
#=GS E0XIZ2_9BETC/652-818      AC E0XIZ2.1
#=GS R1A_BC512/438-596         AC P0C6F6.1
#=GS B1PHK0_9ALPC/735-891      AC B1PHK0.1
#=GS A0A0U1UZA8_9ALPC/737-893  AC A0A0U1UZA8.1
#=GS A0A0K1RLM9_9ALPC/731-879  AC A0A0K1RLM9.1
#=GS A0A1B3Q5W8_9BETC/608-772  AC A0A1B3Q5W8.1
#=GS A0A096XNJ3_9ALPC/416-577  AC A0A096XNJ3.2
#=GS R1AB_FIPV/731-879         AC Q98VG9.2
#=GS Q0ZJB1_CVHK1/646-809      AC Q0ZJB1.1
#=GS A0A0P0LKV0_CVH22/436-593  AC A0A0P0LKV0.1
#=GS D9J202_9ALPC/728-877      AC D9J202.1
#=GS B8Q8U7_SARS/652-818       AC B8Q8U7.1
#=GS A8JNZ1_9ALPC/739-896      AC A8JNZ1.1
#=GS R1AB_CVMJH/671-832        AC P0C6Y0.1
#=GS R1A_SARS/652-818          AC P0C6U8.1
#=GS A0A0K1YZY7_SARS/652-818   AC A0A0K1YZY7.1
#=GS A0A0U1UZA8_9ALPC/434-591  AC A0A0U1UZA8.1
#=GS A0A088DIE1_9BETC/647-814  AC A0A088DIE1.1
#=GS R1A_SARS2/652-818         AC P0DTC1.1
#=GS B1PHJ3_9ALPC/737-893      AC B1PHJ3.1
#=GS R1AB_CVH22/436-594        AC P0C6X1.1
#=GS R1AB_BC512/741-897        AC P0C6W0.1
#=GS A0A0P0ILY9_CVH22/436-593  AC A0A0P0ILY9.1
#=GS B1PHK1_9ALPC/434-592      AC B1PHK1.1
#=GS R1A_CVH22/738-897         AC P0C6U2.1
#=GS A3EXC0_BCHK4/676-847      AC A3EXC0.1
#=GS R1AB_BC279/652-818        AC P0C6V9.1
#=GS F2YDB2_SARS/652-818       AC F2YDB2.1
#=GS A0A059VJE6_9ALPC/434-592  AC A0A059VJE6.1
#=GS D9J202_9ALPC/426-584      AC D9J202.1
#=GS A0A0U1UZC3_9ALPC/436-594  AC A0A0U1UZC3.1
#=GS A0A023YA54_MERS/681-855   AC A0A023YA54.1
#=GS B8Q8S5_SARS/652-818       AC B8Q8S5.1
#=GS S5YAF0_9ALPC/740-896      AC S5YAF0.1
#=GS R1AB_CVPPU/731-879        AC P0C6Y5.1
#=GS A0A0P0ILY9_CVH22/736-895  AC A0A0P0ILY9.1
#=GS R9QTB2_SARS/652-818       AC R9QTB2.1
#=GS Q6UZF5_SARS/652-818       AC Q6UZF5.1
#=GS R1AB_FIPV/425-584         AC Q98VG9.2
#=GS R1AB_CVPPU/425-584        AC P0C6Y5.1
#=GS A0A0U1WHD1_9ALPC/735-891  AC A0A0U1WHD1.1
#=GS A8JNZ0_9ALPC/739-896      AC A8JNZ0.1
#=GS R1A_CVHOC/678-851         AC P0C6U7.1
#=GS A0A125R5A3_9ALPC/425-584  AC A0A125R5A3.1
#=GS R1AB_BCHK9/608-772        AC P0C6W5.1
#=GS H9BZX5_9BETC/671-832      AC H9BZX5.1
#=GS R1A_BCHK4/676-847         AC P0C6T4.1
#=GS A0A0U1WHD1_9ALPC/434-592  AC A0A0U1WHD1.1
#=GS K4K1U5_9ALPC/734-890      AC K4K1U5.1
#=GS B1PHJ4_9ALPC/434-591      AC B1PHJ4.1
#=GS S5Z1D1_9ALPC/740-896      AC S5Z1D1.1
#=GS R1A_CVPPU/731-879         AC P0C6V2.1
#=GS B8Q8S4_SARS/652-818       AC B8Q8S4.1
#=GS D9J203_9ALPC/426-584      AC D9J203.1
#=GS R1AB_CVM2/671-832         AC P0C6X8.1
#=GS K4K1U5_9ALPC/434-590      AC K4K1U5.1
#=GS A0A0K2RVJ3_9BETC/672-845  AC A0A0K2RVJ3.1
#=GS R1A_CVM2/671-832          AC P0C6U9.1
#=GS A0A0U2UMS4_9ALPC/425-584  AC A0A0U2UMS4.1
#=GS S5Z1D1_9ALPC/432-590      AC S5Z1D1.1
#=GS A0A240FW17_9ALPC/391-553  AC A0A240FW17.1
#=GS Q9J3E9_9BETC/668-829      AC Q9J3E9.1
#=GS A0A0U1WHG0_SARS/652-818   AC A0A0U1WHG0.1
#=GS S5YAF0_9ALPC/432-590      AC S5YAF0.1
#=GS A8JNZ0_9ALPC/433-591      AC A8JNZ0.1
#=GS Q0PL14_9ALPC/731-879      AC Q0PL14.1
#=GS B1PHJ4_9ALPC/737-893      AC B1PHJ4.1
#=GS A0A0U1WHG4_9ALPC/733-889  AC A0A0U1WHG4.1
#=GS R1AB_BCHK4/676-847        AC P0C6W3.1
#=GS F2YDB1_SARS/652-818       AC F2YDB1.1
#=GS B8Q8U6_SARS/652-818       AC B8Q8U6.1
#=GS R1A_BCHK5/677-851         AC P0C6T5.1
#=GS A3EXE7_BCHK5/677-851      AC A3EXE7.1
#=GS B1PHI6_9ALPC/433-590      AC B1PHI6.1
#=GS H9TEX0_9ALPC/731-879      AC H9TEX0.1
#=GS A0A059VJE6_9ALPC/739-895  AC A0A059VJE6.1
#=GS A8JNZ1_9ALPC/433-591      AC A8JNZ1.1
#=GS A0A0K1RLM9_9ALPC/425-584  AC A0A0K1RLM9.1
#=GS B1PHJ3_9ALPC/434-591      AC B1PHJ3.1
#=GS A0A0K1Z0N1_SARS/652-818   AC A0A0K1Z0N1.1
#=GS R1A_CVPPU/425-584         AC P0C6V2.1
#=GS A0A0K2RW65_9BETC/672-845  AC A0A0K2RW65.1
#=GS C0KYZ6_9BETC/671-832      AC C0KYZ6.1
#=GS H9TEW9_9ALPC/425-584      AC H9TEW9.1
#=GS R1AB_SARS/652-818         AC P0C6X7.1
#=GS R1A_BCHK9/608-772         AC P0C6T6.1
#=GS D9J203_9ALPC/728-877      AC D9J203.1
R1A_BC512/741-897                    .i-KTLKIDLGLNGVVV...FVTKKFRKAGALLQKLYNAFLDTVTSFIKVAGVAFKY............-----CATcvp.......kiviNGCYHTVTRLFAKDLQ..IPT.............EDGVADFN..TFNHC.V..FP.V..NPTRIETDS......LELE.EVDFVEP.-GVDGKLVILDDYSFYSDGTN....YYP...-SDGKGVVASCFKKKGG...
R1A_CVH22/436-594                    ..ICNSAVAVVGGTIQIl.aSVPEKFLNAFDVFVTAIQTVFDCAVETCTIAGKAFDK............VFDYVLLD..............-NALVKLVTTKLKGVR..ERG.............LNKVKYAT..VVVGS.T..EE.V..KSSRVERST......AVLT.IANNYSK.LFDEGYTVVIGDVAYFVSDG-....YFRl.mASPNSVLTTAVYKP---lfa
B1PHI6_9ALPC/736-892                 ..VKSLKIVVTATEVMI...NTVKRFKRFASVLAKLYSEFLTSVKRVISIGSVTC--............--FHYGFVkpm........lviKDVFYCIEDAIVDTFN..VAT.............EAGLNTVK..TFIGG.D..SS.I..TVSRVEIAS......VELE.AAQYVKP.-EDNGYVSVIDGHTFYTCGD-....YYH...PCDQQNCFSQCFKKVGG...
A0A1X9JQL5_9ALPC/413-574             ..LCDAKLYVENHILRFs.iTTSVKFKSIVGRFLEMLRISFNILC--IEASERYFHCkd........vtGTNLKVFK..............-TLLVSWCEAAITGVK..EAG.............LTTAKYFV..SVTGK.V..CN.V..VVKRTEAIS.....gVFLE.EVDNTIT.PPSTGICRLINDYAFFYGGGY....YFP..lTASNEVVDGAVFKAAG-s..
A0A0A7UXR0_9BETC/671-834             ..VINGAYLILEDGFHFv.gSVPDYARNFVRILREMVNMMLDCMKHTIIKGLPCFKV............AAEYIVFS..............GSFVYKLGLAMIDNLV..LPS.............DMIQSELL..ALHGD.V..IP.VtlESEVVEVVK......QPLK.PLGYRKP.PMKAARLCVVDNLYMAQNGDC....LYPvifDGQRIGLLDQAWRFPCA...
A0A125R5A3_9ALPC/731-879             ..LSNVKIMLGNGVKVV...--CDGCHSLANRLTVNYSRLCDTARKNVKIGGIPFTTfk........tpSNSFIDMK..............-DAIYSVV--------..EYG.............-----EAF..SFKTA.S..VP.V.tNSGTVTNDDws..dpILLE.PADYVEP.-KDNGDVIVIAGYTFYKDEDD...hFYP...-YGSGMVVQKMYNKMGG...
E0ZN59_BCHK9/608-772                 ..LFKAQFTFVKGKFQF...-VRGALNKTCGNLRDMLTVVVGKLLTSVKWAGCKVEAl..........yTGTYYYFSqng.......llteVQVCAKRLGLLLTPRQ..QKM.............-----EVE..VLDGDyDapVT.L..TDLELEEST......GVLE.EVFGASDvKLVQGTLVSLASKLFVRTADG...lFYR...YVKSGGVLSKAFRLRGG...
H9TEX0_9ALPC/425-584                 ..LCTSAFTIVNYKPTF..vVSDNRVKDLVDKCVKVLVKAFDVFTQTITIAGIEAKCf.........vlGAKYLLFN..............-NALVKLVSVKILGKK..QKG.............LESAFFAT..SLVGA.T..VN.V..TPKRTETAN......ISLN.KVDDVAA.-PGEGYIVIVGDMAFYKSGE-....YYFm.mASPDSVLINNVFKAA--rv.
R1A_CVMJH/671-832                    ..LVNGLFAVANGVITFi.qEVPELVKNFVDKFKTFFKVLIDSMSVSILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLPAYI..MPV.............--GCSEAT..CLVGE.I..EPaV.fEDDVVDVVK......APLT.YQGCCKP.PSSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
A0A0U1UZ20_9ALPC/434-592             ..LQKAILTVRDGVIDFyveNVAPKFAAAVEAFKTLVVGVFDFSVDTYKVVGETFKR............VGDYVLLG..............-NAVAKLVTTKVKGVR..QAG.............AKKVTFAT..PVIGV.A..KR.V..TSTRTEIDS......VQLV.ACASTPL.-VENGCTVIVDGIAFFKSGG-....VYRl.mADTDLVYETPVYCQQ--at.
A0A0U1WHG1_9ALPC/616-771             ca--SIKVHFGLEGFVI...TAAKKFKAFARTLTELYNEFAIAVSDVVKIACMNF--............--TYYAFN..............-KPMVAVNGTLCPVEL.vE-Ppsd.......vskEALVTDFM..VFKSP.D..TH.V..KPIRIETES......CELH.EVDFVTP.-RDGGVVKIIDGYAFYESNGN....YYP...-SSVDGVKNVTYRKKGG...
R1A_CVMA5/671-832                    ..LVNGLFAVANGVITFv.qEVPELVKNFVDKFKAFFKVLIDSMSVSILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLSAYV..MPV.............--GCSEAT..CLVGE.I..EPaV.fEDDVVDVVK......APLT.YQGCCKP.PTSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
E0ZN51_BCHK9/608-772                 ..LFRAQFTFIEGKFHF...-VRDTLNSSCGALRDLLSALLSKLLTSARWAGCKVEAv..........yTGTYHYFAkfg.......vvseLQIRAKALGVLLTPRQ..Q--.............---KMEVE..VLEGKaD..AP.V..ELTSLELEEl....hGTLE.EVFGYSDlGLVKGSLVTMASKVFVRTDDG...vLYR...YVKSGGVLLKAFRLRGG...
R1AB_CVHOC/678-851                   ..VLHGAYIVVESDIYFv.kNIPRYASAVAQAFQSVAKVVLDSLRVTFIDGLSCFKI............GRRRICLS..............GRKIYEVERGLLHSSQ..LPLdvydltmpsqvqkAKQKPIYL..KGSGS.D..FS.L..ADSVVEVVT......TSLT.PCGYSEP.PKVADKICIVDNVYMAKAGDK....YYPv.vVDDHVGLLDQAWRVPC-a..
B1PHK0_9ALPC/434-592                 ..LQKAILTVRDGVIDFyveNVAPKFVAAVEAFKMLVVGVFDFSVDTYKVVGETFKR............VGDYVLLG..............-NAVAKLVTTKVKGVR..QAG.............AKKVTFAT..PVIGV.A..KR.V..TSTRTEIDS......VQLV.ACASTPL.-VENGCTVIVDGIAFFKSGG-....VYRl.mADTDLVYETPVYCQQ--at.
A0A0U1WHK4_SARS/652-818              ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEIFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAVVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
B7U2M9_9BETC/678-851                 ..VLHGAYIVVESDIYFv.kNIPRYASAVAQAFRSVAKVVLDSLRVTFIDGLSCFKI............GRRRICLS..............GSKIYEVERGLLHSSQ..LPLdvydltmpsqvqkAKQKPIYL..KGSGS.D..FS.L..ADSVVEVVT......TSLT.PCGYSEP.PKVADKICIVDNVYMAKAGDK....YYPv.vVDGHVGLLDQAWRVPC-a..
R1AB_CVMA5/671-832                   ..LVNGLFAVANGVITFv.qEVPELVKNFVDKFKAFFKVLIDSMSVSILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLSAYV..MPV.............--GCSEAT..CLVGE.I..EPaV.fEDDVVDVVK......APLT.YQGCCKP.PTSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
Q06BE1_9BETC/678-851                 ..VLHGAYIVVESDIYFv.kNIPRYASAVAQAFRSVAKVVLDSLRVTFIDGLSCFKI............GRRRICLS..............GSKIYEVERGLLHSSQ..LPLdvydltmpsqvqkAKQKPIYL..KGSGS.D..FS.L..ADSVVEVVT......TSLT.PCGYSEP.PKVADKICIVDNVYMAKAGDK....YYPv.vVDGHVGLLDQAWRVPC-a..
R1A_BC279/652-818                    ..LVTGVFDIVKGQIQV...-ASDNLKECVKAFLDVLNKALEMCIDQVIIAGAKLRTl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLRAPKEVT..FFEGD.S..HD.T..VFTSEEVVLkngeleALET.PVDSFTN.GAVIGTPVCVNGLMLLELKDKe..qYCA...LSPGLLATNNVFSLKGG...
A3EXI9_BCHK9/608-772                 ..LFKAQFTFVKGKFVF...-ARDALNKSCGALRDLLSVVLSKLLTSARWAGCKVEAl..........yTGTYHYFAkcg.......vlseTQVCAKVLGVLLTPRQ..QKMev.........evLEGTPDAP..-----.-..VD.L..TNNELEEAH......GTLE.EVFGYSDlELVKGSLVTMASKVFVRTDDG...vFYR...YVRSGGVLLKAFRLRGG...
A0A125R5A4_9ALPC/731-879             ..LSNVKIMLGNGVKVV...--CDGCHSLANRLTVNYSRLCDTARKNVKIGGIPFTTfk........tpSNSFIDMK..............-DAIYSVV--------..EYG.............-----EAF..SFKTA.S..VP.V.tNSGTVTNDDws..dpILLE.PADYVEP.-KDNGDVIVIAGYTFYKDEDD...hFYP...-YGSGMVVQKMYNKMGG...
Q0PL14_9ALPC/425-584                 ..LCNSVFTIVNYKPTF..vVPDNRVKDLVDKCVKVLVKAFDVFTQNIIIAGIEAKCf.........vlGAKYLLFN..............-NALVKLVSVKILGKK..QKG.............LECAFFAT..SLVGA.T..AN.V..TPTRTETAT......ISLN.KVDDVVA.-PGEGYIVIVGDMAFYKSGE-....YYFm.mSSPNSVLTNNVFKA---vkv
A3EXA2_BCHK4/676-847                 ..LMHKLYVYTSCGYVA...-VAEHSSKIVQQVLDIMSKAMKLLHTNVSWAGTKLSAiiyegreallfnSGTYFCLSt............kAKTLQGQMNLVLPGDY..NKKtl.........giLDPVPNAD..---TI.D..VN.A..NSTVVDVVH......GQLE.PTNEHGP.SMIVGNYVLVSDKLFVRTEDE...eFYP...LCTNGKVVSTLFRLKGG...
H9BZX6_9BETC/671-832                 ..LVNGLFAVANGVITFv.qEVPELVKNFVDKFKAFFKVLIDSMSVTILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLSAYV..LPV.............--GCSEAT..CLVGE.S..EPaV.fEDDVVDVVK......APLI.YQGCCKP.PTSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
A0A0U1UZ65_BCHK4/676-847             ..LMHKLYVYTSCGYVA...-VAEHSSKIVQQVLDIMSKAMKLLHTNVSWAGTKLAAiiyegrealifnSGTYFCLSt............kAKTLQDQMNLVLPGNY..NKKtl.........giLDPVPNAD..---TI.D..VN.A..NSTVVDVVH......GQLE.PTNEHGP.SMIVGNYVLVSDKLFVRTEDE...eFYP...LCINGKVVSTLFRLKGG...
R1AB_SARS2/652-818                   .i-STCACEIVGGQIVT...-CAKEIKESVQTFFKLVNKFLALCADSIIIGGAKLKAl.........nlGETFVTHS..............-KGLYRKC---VKSRE..ETGll.........mpLKAPKEII..FLEGE.T..LP.T..EVLTEEVVLkt.gdlQPLEqPTSEAVE.APLVGTPVCINGLMLLEIKDTe..kYCA...LAPNMMVTNNTFTLKGG...
A0A0U1WHG4_9ALPC/434-592             ..LSKAVLNVTKEGIEFa.aEVPSCFESCFSVFKEFVTGIFDFTVNSVKIAGRSFKS............IGSYVLFD..............-NAIIKFVAVKVKGLH..QAG.............IKSTEYAT..SIIGK.T..TK.V..NSKRTESAD......VNLV.LVNDKQP.LLKDGVTKIIGGKSFFYSGG-....VYRl.mSDNNSVLDEPVFQEK--vs.
H9AA60_9BETC/670-841                 ..VLRGAYIVVESDIYFi.mSIPDYARVVVRTFQNVFKMALDCVKVSFLKGLSAFKI............GREKICFV..............GSKFYKVERGNLNDLV..RRDlvv.......psvTQRAKNQQpvYLTGN.C..AP.VnvDDDVVEVVT......NPVT.SCGYQKP.PQKCDKICIVDNVYMAKCGEK....FFPvvvNEDYIGLLDQAWRFPCA...
A0A0P0LKV0_CVH22/736-895             ..LKSLQLKLTAQGLLG...NCAKRFRRWLNVLLEAYNAFLDTVVSVVKIGGKTFKTy.........afDKPYIVIH..............-DIVCRVEHKTDADWV..ELLp...........rDDRIKHFS..TFEDA.Y..LP.I.aDPTHFDVEE......VQLL.DTEFVEP.-GCGGILALIDDHVFYKKDDI....YYP...-SSGTKILPVAFTKAAG...
H9TEW9_9ALPC/731-879                 lg--SVQLLIGNGVKVV...--CDGCKVFANQLSNGYNKLCNAARTDIEIGGIPFSTfk........tpTNTFIEMT..............-DAIYSVI--------..EQG.............-----KAL..SFGNA.D..VP.V.lDNGTISTDDws..epILLE.PAEYVKP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGSGKIVQRMYNKMGG...
A0A125R5A4_9ALPC/425-584             ..LCTSAFTIMDYKPVF..vVSSNSVKTLVDKCVKILVKAFDVFTQTITIAGVEAKWf.........vlGSKYLLFN..............-NALVKLVNVKILGKR..QKG.............LDSAFFAT..NLIGA.T..VN.V..TPQRTEAAN......ISLN.KVDDVVT.-PGEGHIVVVGDMAFYKSGEH....YFM..mASPDSVLTNNVFKAA--rv.
U5LR11_9BETC/685-859                 ..VVYKAFVYTSAGFVS...-TLEKTSPAAQKLLDVLSKAFKLLHKKVSWAGSKVHAviyegkdalvfsSGTYHCVTa............pGSVVGAHLEATIPGEV..VKKql.........smLTATNYST..---TV.D..VR.P..KTRNVELVY......GQLE.TTNMHSP.DVVVGDYVIVSDKVFVRSEEDgrlaFYP...MCTNGKAVPCMFTLKGG...
A0A0U1UZC3_9ALPC/630-787             ..LKNLKIQFGLNGFVG...TCAKRYRKILNTLLTMYNDFAASVRQVVVLAGVKL--............--SYYAFEtpa........valNGVLHAVKRCSAKSLD..VPC.............EEGAAEFN..VFEGG.V..HL.L..KPTAVELAS.....dMELL.ETDYVEP.-CAGGVLRICDDYAWYMDGDR....FYP...-YGDNGVIPLCYKLGGG...
B1PHK1_9ALPC/735-891                 ..VKNLKVSVTVKGVIC...TAAKRFKRWANALAKIYTEFITGACKTVVIGGLEF--............--AYYCFAkpa........ialGDIFVRVSKNALSAFN..RPT.............EAGAVDAL..VFEGG.D..IE.T..VCSRVQFDT......VALE.PVQEVPV.-PSDGYVAVVDGYTFFTDGTH....YFP...-TGLSRCYTTCFKRGGG...
U5KNA9_9BETC/685-859                 ..VVYKAFVYTSAGFVS...-TLEKTSPAAQKLLDVLSKAFKLLHKKVSWAGSKVHAviyegkdalvfsSGTYHCVTa............pGSVVGAHLEATIPGEV..VKKql.........smLTATNYST..---TV.D..VR.P..KTRNVELVY......GQLE.TTNMHSP.DVVVGDYVIVSDKVFVRSEEDgrlaFYP...MCTNGKAVPCMFTLKGG...
A0A0U1WHG1_9ALPC/430-587             lr--DVSCVVMNGALELv.aNVPNHFASLFDHLRVLVASVTTLFIEEFKVAGVAFKR............LGDYVLFD..............-NALCQLASVKLKGFK..QDG.............LKTATYVS..TVYGP.S..KR.V..KVKRVEKCD......ANLV.LCDSAPL.-VDEGYACVIQGQAFYTNGT-....YYWf.mTDHTSVLESPVFKKD--ti.
T2B9I2_MERS/679-853                  .f-LRNAYVYTSQGFVV...-VNGKVSTLVKQVLDLLNKGMQLLHTKVSWAGSNISAviysgreslifpSGTYYCVTt............kAKSVQQDLDVILPGEF..SKKql.........glLQPTDNST..---TV.S..VT.V..SSNMVETVV......GQLE.QTNMHSP.DVIVGDYVIISEKLFVRSKEEdgfaFYP...ACTNGHAVPTLFRLKGG...
A0A0U2UMS4_9ALPC/731-879             lg--SVQLLIGNGVKVV...--CDGCKGFANQLSKGYNKLCNAARNDIEIGGIPFSTfk........tpTSTFIEMT..............-DAIYSVV--------..EQG.............-----EAL..SFRDA.D..VP.V.vDDGTTATVDws..epILLE.PAEYVKP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGFGKILQRMYNKMGG...
R1AB_BC512/438-596                   ..LSCATMSVVKGVITLv.aEVPEIFKRLFYTLTSALKSLCTSSCDALVVAGKSFAK............IGDYVLLP..............-SALVRLVSSKVKGKA..QSG.............IKQLQFAT..VVLGD.T..HK.V..ESDRVEFSS......VNLK.MVDEEFP.LNPVGHTVAVGNQAFFCSDG-....LYRf.mADRDLVITSPIFKP---ele
B1PHI7_9ALPC/736-892                 ..VKSLKIVVTATEVMI...NTVKRFKRFASVLAKLYSEFLTSVKRVISIGSVTC--............--FHYGFVkpm........lviKDVFYCIEDAIVDTFN..VAT.............EAGLNTVK..TFIGG.D..SS.I..TVSRVEIAS......VELE.AAQYVKP.-EDNGYVSVIDGHTFYTCGD-....YYH...PCDQQNCFSQCFKKVGG...
R1AB_CVH22/738-897                   ..LKSLKLNLTQQGLLG...TCAKRFKRWLGILLEAYNAFLDTVVSTVKIGGLTFKTy.........afDKPYIVIR..............-DIVCKVENKTEAEWIelFPH.............NDRIKSFS..TFESA.Y..MP.I.aDPTHFDIEE......VELL.DAEFVEP.-GCGGILAVIDEHVFYKKDGV....YYP...-SNGTNILPVAFTKAAG...
T2B9U0_MERS/679-853                  .f-LRNAYVYTSQGFVV...-VNGKVSTLVKQVLDLLNKGMQLLHTKVSWAGSNISAviysgreslifpSGTYYCVTt............kAKSVQQDLDVILPGEF..SKKql.........glLQPTDNST..---TV.S..VT.V..SSNMVETVV......GQLE.QTNMHSP.DVIVGDYVIISEKLFVRSKEEdgfaFYP...ACTNGHAVPTLFRLKGG...
A0A0U1UZ20_9ALPC/735-891             ..VKNLKVSVTVKGVIC...TAAKRFKRWANALAKIYTEFITGACKTVVIGGLEF--............--AYYCFAkpa........ialGDIFVRVSKNALSAFN..RPT.............EAGAVDAL..VFEGG.D..IE.T..VCSRVQFDT......VALE.PVQEVPV.-PSDGYVAVVDGYTFFTDGTH....YFP...-TGLSRCYTTCFKRGGG...
B1PHI7_9ALPC/433-590                 ..LSQVLIVVRDGVIDIi.hNVPEAFKSAFEVFKDLVSGVFDLVVDHFKVANKKFKR............AGNYVLFE..............-NALACIVSAKVKGVK..QAG.............LKKLLYAK..AIVGA.T..VK.V..TVSRIETAT......VKLT.ECKPSKF.-VKKGNVAVINDIAFFHSDG-....VYRl.mSDSDEVYEDIAFTAEG-t..
R1AB_BCHK5/677-851                   .v-SERLYVYTSVGFVV...-VGDYSSQLLKQFMHILSKAMQLLHTTVSWAGSKLPSvvyngrdslvfpSGTYYCVSt............qGRSLQDQFDLVIPGDL..SKKqi.........giLEPTPNST..---TV.D..KK.I..NTNVVEVVV......GQLE.PTKEHSP.ELVVGDYVIISNKIFVRSVEDsetvFYP...LCTDGKIVPTLFRLKGG...
E0XIZ2_9BETC/652-818                 ..LVTGAYVVIRGKIQV...-VNTSLIECVTSFVDVVNKVFELCTDYITVAGARVRAi.........nfGEVLIAQS..............-RGLYRQCVRARDQLQ..LLM............pLKSPKDVV..FLDGD.A..YD.TllTSEEVTVKNgt.leaLDL-.ELSDVVT.GVAEGVPVCVNGLMLLELKEKe..qYCA...LSPSLLATNNVFTLKGG...
R1A_BC512/438-596                    ..LSCATMSVVKGVITLv.aEVPEIFKRLFYTLTSALKSLCTSSCDALVVAGKSFAK............IGDYVLLP..............-SALVRLVSSKVKGKA..QSG.............IKQLQFAT..VVLGD.T..HK.V..ESDRVEFSS......VNLK.MVDEEFP.LNPVGHTVAVGNQAFFCSDG-....LYRf.mADRDLVITSPIFKP---ele
B1PHK0_9ALPC/735-891                 ..VKNLKVSVTVKGVIC...TAAKRFKRWANALAKIYTEFITGACKTVVIGGLEF--............--AYYCFAkpa........ialGDIFVRVSKNALSAFN..RPT.............EAGAVDAL..VFEGG.D..IE.T..VCSRVQFDT......VALE.PVQEVPV.-PSDGYVAVVDGYTFFTDGTH....YFP...-TGLSRCYTTCFKRGGG...
A0A0U1UZA8_9ALPC/737-893             ..VKSLKITVTATEVMI...NTVKRFKRFASALAKLYSEFMNTVKNIISIGSIKC--............--YHYGFVkpv........lviKDVFYRIHDAAVDTFN..VDV.............EAGLNTVK..TFSGG.E..NP.I..TFSRVEVAS......VELE.HAEYVKP.-EANGHVSVINGHTFYTCGDY....YYP...-CDQNNCFSQCFKKVGG...
A0A0K1RLM9_9ALPC/731-879             lg--SVQLLIGNGVKVV...--CAGCKGFANQLSKGYNKLCNAARDDIEIGGISFSTfk........tpTNTFIEMT..............-DAIYSVI--------..EQG.............-----DAL..SFRDA.D..VP.V.vDDGTIAIVDws..etILLE.PAEYVEP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGFGKIVQRMYNKMGG...
A0A1B3Q5W8_9BETC/608-772             ..LFNMQFTFAKGKFTF...-LKEKLNKSCVALRELLTVIVNKFATTVKWAGCKIDGf..........yNGDYHFFSakg.......vlteVQVCAKTLGAMLTPRQ..QRMev.........evLDGKYDAP..-----.-..VA.I..TVPELEELN......GTLE.EVFGFDDlTLVRGSLVALASKVFVRTDDG...lLFR...YVKSGGVFLKAFRLRGG...
A0A096XNJ3_9ALPC/416-577             ..LCNAKLYVENHILRFs.iTTSTKFKNIVGRFLEMLRVSFNILCIDASDRYFCCKDv..........tGTNLKLFK..............-TLLVSWYESVINGAK..EAG.............LTTAKYFT..SVTGK.L..RA.V..TVRRTEAGG.....dTVLE.EVDDKVD.PPPSGICRLINDYAFYYGGGY....YFP..lTASDQIIEGAVFKAAG-s..
R1AB_FIPV/731-879                    .l-GNVKIMLGNGVKVV...--CDGCHSFANRLTINYNKLCDTARKDIEIGGIPFSTfk........tpSSSFIDMK..............-DAIYSVV--------..EYG.............-----EAL..SFKTA.S..VP.V.tNSGIITTDDws..dpILLE.PADYVEP.-KDNGDVIVIAGYTFYKDEDD...hFYP...-YGSGMVVQKMYNKMGG...
Q0ZJB1_CVHK1/646-809                 ..LLNGLFVVSQANFNFv.aLIPDYAKILVNKFYTFFKLLLECVTVDVLKDMPVLKT............INGLVCIV..............GNKFYNVSTGLIPGFV..LPC.............NAQEQQIY..FFEGV.A..ES.VivEDDVIENVK......SSLS.SYEYCQP.PKSVEKICIIDNMYMGKCGDK....FFPivmNDKNICLLDQAWRFPCA...
A0A0P0LKV0_CVH22/436-593             ..ICSAAVAVVNGSIQIv.aSVPEKFLNAFDVFSSAVRTMFECAADKCTIAGKAFAK............VGDYVLLD..............-NALVKLVSSKLKGSR..ENG.............LTTVQYAT..TVVGS.T..ED.V..KSSRVERST......ALLT.FASSYPK.LSDEGYTAVIGGVAYFVSDG-....YFRl.mASPTSVLTTAVYK----plf
D9J202_9ALPC/728-877                 ..ITHVTCTFTGGLIKL...-LLDGYDALAGMITRGYQQLCKAKPFKLDVAGMTLSGft.......tpiGRDFLDFG..............----EDVVEIFCGGKT..R--.............--------..CFSGA.S..IP.V.sVDKVVEDDVw...stIILE.ETEYQPP.-KNGGVVVVIGGYTFYTTNHE...qFYP...-FGDSKVVQKLYNKAGG...
B8Q8U7_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngaleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
A8JNZ1_9ALPC/739-896                 ck--NLRLHFEFGELKG...TVVKRFKGILGTLLTVYNEFIQTTVSVLTICGISA--............--KYYAFDkpm........lcmHGITERVTSFDITSLG..KPI.............LDGLSRCN..VFARG.S..NA.V..VVDSVDHEL......LDLE.ECDFVEP.-ASHGVLVVSDDYGFYSCETG....IYP...YASDGKVLPLRFRKKAG...
R1AB_CVMJH/671-832                   ..LVNGLFAVANGVITFi.qEVPELVKNFVDKFKTFFKVLIDSMSVSILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLPAYI..MPV.............--GCSEAT..CLVGE.I..EPaV.fEDDVVDVVK......APLT.YQGCCKP.PSSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
R1A_SARS/652-818                     ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
A0A0K1YZY7_SARS/652-818              ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDIVNKALEMCIDQVTIAGVKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAVVGTPVCVNGLMLLELKDKe..qYCA...LSPGLLATNNVFRLKGG...
A0A0U1UZA8_9ALPC/434-591             ..LSQVLIVVRDGVIDIi.hSVPEAFKSAFEIFKDLVTGVFDLVVDHFKIANKKFKR............AGDYILFE..............-NALACLVSGKIKGVK..QAG.............LKKLLYAK..AIVGA.T..VK.V..TVNRIESAT......VKLV.ECKPSNF.-VKKGSAVVINNIAFFHSDG-....IYRl.mSDSDEVYEDIAFTAEG-v..
A0A088DIE1_9BETC/647-814             ..IVRNKYKFVKGKFVL...-LAKNVSSVVQSVVAYLNNVISAFYQQVQFAGTYV--............-GAFEIHQtl.........lelGGAIYTRVQVAANSIQ..DLVl..........psTVSKKELT..FVDGH.A..ID.T..ELTSEEVTVlegiveQLDT.DTNKIAG.DSIKGDLVTVNNCVFVRFGDG...nLSP...ATTDCQATKGVFKLKGG...
R1A_SARS2/652-818                    .i-STCACEIVGGQIVT...-CAKEIKESVQTFFKLVNKFLALCADSIIIGGAKLKAl.........nlGETFVTHS..............-KGLYRKC---VKSRE..ETGll.........mpLKAPKEII..FLEGE.T..LP.T..EVLTEEVVLkt.gdlQPLEqPTSEAVE.APLVGTPVCINGLMLLEIKDTe..kYCA...LAPNMMVTNNTFTLKGG...
B1PHJ3_9ALPC/737-893                 ..VKSLKITVTATEVMI...NTVKRFKRFASALAKLYSEFMNTVKNIISIGSIKC--............--YHYGFVkpv........lviKDIFYRIYDAAVDTFN..VAV.............EAGLNTVK..TFSGG.E..NP.I..TFSRVEVAS......VELE.HAEYVKP.-EANGHVSVINGHTFYTCGDY....YYP...-CDQNNCFSQCFKKVGG...
R1AB_CVH22/436-594                   ..ICNSAVAVVGGTIQIl.aSVPEKFLNAFDVFVTAIQTVFDCAVETCTIAGKAFDK............VFDYVLLD..............-NALVKLVTTKLKGVR..ERG.............LNKVKYAT..VVVGS.T..EE.V..KSSRVERST......AVLT.IANNYSK.LFDEGYTVVIGDVAYFVSDG-....YFRl.mASPNSVLTTAVYKP---lfa
R1AB_BC512/741-897                   .i-KTLKIDLGLNGVVV...FVTKKFRKAGALLQKLYNAFLDTVTSFIKVAGVAFKY............-----CATcvp.......kiviNGCYHTVTRLFAKDLQ..IPT.............EDGVADFN..TFNHC.V..FP.V..NPTRIETDS......LELE.EVDFVEP.-GVDGKLVILDDYSFYSDGTN....YYP...-SDGKGVVASCFKKKGG...
A0A0P0ILY9_CVH22/436-593             ..ICSAAVAVVNGSIQIv.aSVPEKFLNAFDVFSSAVRTMFECAADKCTIAGKAFAK............VGDYVLLD..............-NALVKLVSSKLKGSR..ENG.............LTTVQYAT..TVVGS.T..ED.V..KSSRVERST......ALLT.FASSYPK.LSDEGYTAVIGGVAYFVSDG-....YFRl.mASPTSVLTTAVYK----plf
B1PHK1_9ALPC/434-592                 ..LQKAILTVRDGVIDFyveNVAPKFVAAVEAFKMLVVGVFDFSVDTYKVVGETFKR............VGDYVLLG..............-NAVAKLVTTKVKGVR..QAG.............AKKVTFAT..PVIGV.A..KR.V..TSTRTEIDS......VQLV.ACASTPL.-VENGCTVIVDGIAFFKSGG-....VYRl.mADTDLVYETPVYCQQ--at.
R1A_CVH22/738-897                    ..LKSLKLNLTQQGLLG...TCAKRFKRWLGILLEAYNAFLDTVVSTVKIGGLTFKTy.........afDKPYIVIR..............-DIVCKVENKTEAEWIelFPH.............NDRIKSFS..TFESA.Y..MP.I.aDPTHFDIEE......VELL.DAEFVEP.-GCGGILAVIDEHVFYKKDGV....YYP...-SNGTNILPVAFTKAAG...
A3EXC0_BCHK4/676-847                 ..LMHKLYVYTSCGYVA...-VAEHSSKIVQQVLDIMSKAMKLLHTNVFWAGTKLSAiiyegreallfnSGTYFCLSt............kAKTLQDQMNLVLPGDY..NKKtl.........giLDPVPNAD..---TI.D..VN.A..NSTVVDVVH......GQLE.PTNEHGP.SMIVGNYVLVSDKLFVRTEDE...eFYP...LCTNGKVVSTLFRLKGG...
R1AB_BC279/652-818                   ..LVTGVFDIVKGQIQV...-ASDNLKECVKAFLDVLNKALEMCIDQVIIAGAKLRTl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLRAPKEVT..FFEGD.S..HD.T..VFTSEEVVLkngeleALET.PVDSFTN.GAVIGTPVCVNGLMLLELKDKe..qYCA...LSPGLLATNNVFSLKGG...
F2YDB2_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
A0A059VJE6_9ALPC/434-592             ..LSCATLSIVNGVFEFi.aEVPEKLAAAVTVFVNFLNELFESACDCLKVGGKTFNK............VGSYVLFD..............-NALVKLVKAKVRGPR..QAG.............VCEVRYTS..LVIGS.T..TK.V..VSKRVENAN......VNLV.VVDEDVT.LNTTGRTVVVDGLAFFESDG-....FYRh.lADADVVIEHPVYKSAC-e..
D9J202_9ALPC/426-584                 ..ICSICFTIKESKPLF...IVSSAASSLVRTCVQFLESAFDIFTQTVEVVGITCKCv.........vlGCKYLLFD..............-NALVMLKDLKLKGKR..EAG.............LNTATFAS..AIIGG.T..AE.V..NPTRFEYST......ANLT.LVNDVVQ.-PGPGYAVVIGGMAFYCTGD-....YYFm.mSSPTSVITTSVFKAS--if.
A0A0U1UZC3_9ALPC/436-594             ..LTTAVLTVVDGKLKLi.aDIPSVFESVFDVFKSALEGIFDACANTVTIAGKAVRA............AFDYLLFD..............-NAIVKLQSVKVSGLK..QAG.............VKNALYAS..VVIGP.T..QN.V..KTTRVEVVN......VKLT.PITDKVP.FNREGYVALVDGVAFFVNDG-....YYRl.mADSDCVLEEPVFKAASG...
A0A023YA54_MERS/681-855              .f-LTQAYVYTTTGFVA...-VGCKVSNLTKQLLEILSKAMQLLHTKVSWAGAKVKAvvynsreslvfpSGTYYCVAa............rANAVQQEFSAVLPGEL..AKKql.........glLEPVRHAT..---TV.D..VQ.V..QNKVVDVVV......GQLE.ETNMHSP.DLIVGDYVVISDKLFVRCEEDgqtvFYP...MCTNGQAVPTLFRLKGG...
B8Q8S5_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngaleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
S5YAF0_9ALPC/740-896                 ..VRNLKVSFGLEGIIV...SAARKFKQWAKLLAQMYNEFLNSVSAAIHIAGVKF--............--IHYATTvpq........layNGCLYALKKTYAATVG..LQT.............EEGVDGFY..AFDHC.Q..LP.V..TPRLLQVED......VNLE.EADFKPP.-VGGGCVAVINGYSFYVEGDS....YYP...-TDCSAIHSLRFRKLGG...
R1AB_CVPPU/731-879                   lg--SVQLLIGNGVKVV...--CDGCKGFANQLSKGYNKLCNAARNDIEIGGIPFSTfk........tpTNTFIEMT..............-DAIYSVI--------..EQG.............-----KAL..SFRDA.D..VP.V.vDNGTISTADws..epILLE.PAEYVKP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGFGKIVQRMYNKMGG...
A0A0P0ILY9_CVH22/736-895             ..LKSLQLKLTAQGLLG...NCAKRFRRWLNVLLEAYNAFLDTVVSVVKIGGKTFKTy.........afDKPYIVIH..............-DIVCRVEHKTDADWV..ELLp...........rDDRIKHFS..TFEDA.Y..LP.I.aDPTHFDVEE......VQLL.DTEFVEP.-GCGGILALIDDHVFYKKDDI....YYP...-SSGTKILPVAFTKAAG...
R9QTB2_SARS/652-818                  ..LVTGVFDIVKGQIQV...-ASDNLKECVKTFLDVINKALEMCIDQVTIAGAKMRSl.........nlGEIFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLDGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAVVGTPVCVNGLMLLELKDKe..qYCA...LSPGLLATNNVFRLKGG...
Q6UZF5_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
R1AB_FIPV/425-584                    ..LCTSAFTIMDYKPVF..vVSSNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCf.........vlGSKYLLFN..............-NALVKLVSVKILGKR..QKG.............LDSAFFAT..NLIGA.T..VN.V..TPQRTESAY......ISLN.KVDDVVT.-PGGGHIVIIGDMAFYKSEE-....YYFm.mASPDSVLVNNVFKAA--rv.
R1AB_CVPPU/425-584                   ..LCTSAFTIVNYKPTF..vVPDNRVKDLVDKCVKVLVKAFDVFTQIITIAGIEAKCf.........vlGAKYLLFN..............-NALVKLVSVKILGKK..QKG.............LECAFFAT..SLVGA.T..VN.V..TPKRTETAT......ISLN.KVDDVVA.-PGEGYIVIVGDMAFYKSGE-....YYFm.mSSPNFVLTNNVFKA---vkv
A0A0U1WHD1_9ALPC/735-891             ..VKNLKVSVTVKGVIC...TAAKRFKRWANALAKLYSEFIVSTCKTVVIGGLDF--............--AYYCFAkpa........ialGDTFVRVSRNALSAFN..RPV.............EDGSSEAY..TFDGG.A..IE.T..VCSRVQFDT......VVLE.SVQDIPV.-PSDGYVAVVDGYTFFTDGTH....YFP...-TGLSRCHTTCFKRGGG...
A8JNZ0_9ALPC/739-896                 ck--NLRLHFEFGELKG...TVVKRFKGILGTLLTVYNEFIQTTVSVLTICGISA--............--KYYAFDkpm........lcmHGITERVTSFDITSLG..KPI.............LDGLSRCN..VFARG.S..NA.V..VVDSVDHEL......LDLE.ECDFVEP.-ASHGVLVVSDDYGFYSCETG....IYP...YASDGKVLPLRFRKKAG...
R1A_CVHOC/678-851                    ..VLHGAYIVVESDIYFv.kNIPRYASAVAQAFQSVAKVVLDSLRVTFIDGLSCFKI............GRRRICLS..............GRKIYEVERGLLHSSQ..LPLdvydltmpsqvqkAKQKPIYL..KGSGS.D..FS.L..ADSVVEVVT......TSLT.PCGYSEP.PKVADKICIVDNVYMAKAGDK....YYPv.vVDDHVGLLDQAWRVPC-a..
A0A125R5A3_9ALPC/425-584             ..LCTSAFTIMDYKPVF..vVSSNSVKTLVDKCVKILVKAFDVFTQTITIAGVEAKWf.........vlGSKYLLFN..............-NALVKLVNVKILGKR..QKG.............LDSAFFAT..NLIGA.T..VN.V..TPQRTEAAN......ISLN.KVDDVVT.-PGEGHIVVVGDMAFYKSGEH....YFM..mASPDSVLTNNVFKAA--rv.
R1AB_BCHK9/608-772                   ..LFKAQFTVVKGKFQF...-LRASLNSKCHSLCDLLTTIMSKLLTSVKWAGCKVDAl..........yTGTYYYFSrkg.......vlteVQLCAKRLGLLLTPKQ..QKMev.........evLDGDFDAP..-----.-..VT.L..TDLELEECT......GVLE.EVFGASDvKLVKGTLVSLASKLFVRTEDG...fLYR...YVKSGGVLGKAFRLRGG...
H9BZX5_9BETC/671-832                 ..LVNGLFAVANGVITFv.qEVPELVKNFVDKFKAFFKVLIDSMSVTILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLSAYV..LPV.............--GCSEAT..CLVGE.S..EPaV.fEDDVVDVVK......APLI.YQGCCKP.PTSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
R1A_BCHK4/676-847                    ..LMHKLYVYTSCGYVA...-VAEHSSKIVQQVLDIMSKAMKLLHTNVSWAGTKLSAiiyegreallfnSGTYFCLSt............kAKTLQGQMNLVLPGDY..NKKtl.........giLDPVPNAD..---TI.D..VN.A..NSTVVDVVH......GQLE.PTNEHGP.SMIVGNYVLVSDKLFVRTEDE...eFYP...LCTNGKVVSTLFRLKGG...
A0A0U1WHD1_9ALPC/434-592             ..LSKAVLVVRNRCLDFyveDVAPKFRQALELLKTLVTGLFDLAVETFKVAGETFSR............VGDCVLLE..............-NAVVRLVSTKVKGLK..QSG.............VKKATVAT..PIVGA.T..KK.V..QSSRTEVGD......LTLV.KTASVPL.-VNQGVTVLIGGVAFFKSGG-....VYRl.mADADAVYEEPVYCQQA-s..
K4K1U5_9ALPC/734-890                 ..VKSIKVDFGLDGIII...TATKRFKKFAGILLNLYREFIASVTSVVKIGGKSF--............--TYYLFEkpk........maiSGILHNVRVLKAKDCT..IAA.............EDILVEMT..VFDSF.E..IP.I..QPSRVEVQQ......VEFE.EAEFVQP.-QAGGVLAVVNKHVFYNKGDY....YYP...-ANETHAVPVCYKRGS-g..
B1PHJ4_9ALPC/434-591                 ..LTQVLIVVRNGVIDIi.hSVPEAFKSAFEIFKDLVTGVFDLVVDHFKIANKKFKR............AGDYILFE..............-NALACLVSGKIKGVK..QAG.............LKKLLYAK..AIVGA.T..VK.V..TVNRIESAT......VKLV.ECKPSNF.-VKKGSAVVINNIAFFHSDG-....VYRl.mSDSDEVYEDIAFTAE--sv.
S5Z1D1_9ALPC/740-896                 ..VRNLKVSFGLEGIIV...SAARKFKQWAKLLAQMYNEFLNSVSAAIHIAGVKF--............--IHYATTvpq........layNGCLYALKKTYAATVG..LQT.............EEGVDGFY..AFDHC.Q..LP.V..TPRLLQVED......VNLE.EADFKPP.-VGGGCVAVINGYSFYVEGDS....YYP...-TDCSAIHSLRFRKLGG...
R1A_CVPPU/731-879                    lg--SVQLLIGNGVKVV...--CDGCKGFANQLSKGYNKLCNAARNDIEIGGIPFSTfk........tpTNTFIEMT..............-DAIYSVI--------..EQG.............-----KAL..SFRDA.D..VP.V.vDNGTISTADws..epILLE.PAEYVKP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGFGKIVQRMYNKMGG...
B8Q8S4_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngaleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
D9J203_9ALPC/426-584                 ..ICSICFTIKESKPLF...IVSSAASSLVRTCVQFLESAFDIFTQTVEVVGITCKCv.........vlGCKYLLFD..............-NALVMLKDLKLKGKR..EAG.............LNTATFAS..AIIGG.T..AE.V..NPTRFEYST......ANLT.LVNDVVQ.-PGPGYAVVIGGMAFYCTGD-....YYFm.mSSPTSVITTSVFKAS--if.
R1AB_CVM2/671-832                    ..LVNGLFAVANGGITFl.sDVPELVKNFVDKFKVFFKVLIDSMSVSVLSGLTVVKT............ASNRVCLA..............GCKVYEVVQKRLSAYV..MPV.............--GCNEAT..CLVGE.I..EPaV.vEDDVVDVVK......APLT.YQGCCKP.PTSFEKICVVDKLYMAKCGDQ....FYPvvvDNDTIGVLDQCWRFPCA...
K4K1U5_9ALPC/434-590                 ..LAKATIRVVNGCIEFc.aNIPTCFSDAFECLKSFVETLFDLTVNTVTFAGQSFKA............VGDYVLLN..............-NAIVKFVSVKVKGLH..QDG.............IKSTMYAT..TVVGK.T..AK.V..KSRRIETCN......ANLS.VVPDQAL.-VKDGVTKIVGGRSFFCSGG-....CYRl.mSDVDTVIMSPVYQA---va.
A0A0K2RVJ3_9BETC/672-845             ..VLHGFYMVVESSIYFv.kSVPSYARSVVQAFQDVVRVVLESLRVTFIKGLSVFKI............GRKRICFSgsnvyelerglldlS--------------H..LPSsvydltmpskiqkANQKPIYL..KGVGF.D..FS.L..SDDVVEVVT......ASII.PCGYSKP.PKIAEKICVVDNVYMAKAGDK....YYPv.vVDKQAGLLDQAWRIPC-a..
R1A_CVM2/671-832                     ..LVNGLFAVANGGITFl.sDVPELVKNFVDKFKVFFKVLIDSMSVSVLSGLTVVKT............ASNRVCLA..............GCKVYEVVQKRLSAYV..MPV.............--GCNEAT..CLVGE.I..EPaV.vEDDVVDVVK......APLT.YQGCCKP.PTSFEKICVVDKLYMAKCGDQ....FYPvvvDNDTIGVLDQCWRFPCA...
A0A0U2UMS4_9ALPC/425-584             ..LCNSVFTIVNYKPTF..vVPDNRVKDLVDKCVQVFVKAFDAFTQVITIAGIEAKCf.........vlGAKYLLFN..............-NALVKLVSVKILGKK..QKG.............LECAFFAT..SLVGA.T..VN.V..TPKRTETAT......ISLN.KVDDVVA.-PGEGYIVIVGDMAFYKSGE-....YYFm.mSSPNSVLTSNVFKA---vkv
S5Z1D1_9ALPC/432-590                 .l-ACASVSVINRCLVLa.aDVPPIFKECFAKFVSAIAALFKSTCDTVKVARHSYPR............LFDYVLLD..............-NHLVKMVTQRITGKK..QAG.............LTEATFAD..VILGA.T..TN.V..TSDRTEACN......VGLV.LCDYDVP.VLNTGYTAIIGGKAFFCSEG-....YYRf.mATPNVVLDEPVFRAAA-e..
A0A240FW17_9ALPC/391-553             .i-QHFTLRIIDGVVVCk.tKCSGVLSKVFEDFVNFVVKLLNKSKDIGSFLGVQF--............-RTFMNVNm............mNDCLFTVKNVTVNGVR..SMG.............LTTMNVID..FFLGK.K..SS.V..VVNEFEVAEww.nnsVSMV.LCDAKPE.--GNGKGVVIAGQAFYNEGQ-....FYWpllKGTTEVAETLCFKQAGG...
Q9J3E9_9BETC/668-829                 ..LVNGLFAVANGVITFv.qEVPELVKNFVDKFKAFFKVLIDSMSVSILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLSAYV..MPV.............--GCSEAT..CLVGE.I..EPaV.fEDDVVDVVK......APLT.YQGCCKP.PTSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
A0A0U1WHG0_SARS/652-818              ..LVTGVFDIVKGQIRV...-FSDNLKECVKTFVGVVNKALEMCIDQVTIAGTKVRSl.........nlGEVLIAQS..............-KGLYRRC---VRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLISEEVVLkngeleALET.PVDSFTN.GAVVGTPVCVNGLMLLELKDKe..qYCA...LSPGLLATNNVFRLNGG...
S5YAF0_9ALPC/432-590                 .l-ACASVSVINRCLVLa.aDVPPIFKECFAKFVSAIAALFKSTCDTVKVARHSYPR............LFDYVLLD..............-NHLVKMVTQRITGKK..QAG.............LTEATFAD..VILGA.T..TN.V..TSDRTEACN......VGLV.LCDYDVP.VLNTGYTAIIGGKAFFCSEG-....YYRf.mATPNVVLDEPVFRAAA-e..
A8JNZ0_9ALPC/433-591                 ..LCSAAFSVVDGVPVIv.cTVAERFSKAFTDFLSYTRECFTALCDDIVVFGVKCKA............VGDYIIFN..............-NSVVKTVKAKIKGVK..EAG.............LKTMTYTQ..CLLGP.T..KP.V..KVKRVERSV......AQLK.VVDTAVP.LKQEGECLVVGGRAMFRSDG-....YYRf.mADADVVLESPVFTA---gsq
Q0PL14_9ALPC/731-879                 lg--SVQLLIGNGVKVV...--CDGCKGFANQLSKGYNKLCNAARNDIEIGGIPFSTfk........tpTNTFIEMT..............-DAIYSVV--------..EQG.............-----EAL..SFRDA.D..VP.V.vDDGTIATVDws..epILLE.PAEYVKP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGFGKIVQRMYNKMGG...
B1PHJ4_9ALPC/737-893                 ..VKSLKITVTATEVMI...NTVKRFKRFASALAKLYSEFMNTVKNIISIGSIKC--............--YHYGFVkpv........lviKDIFYRIYDAAVDTFN..VAV.............EAGLNTVK..TFSGG.E..NP.I..TFSRVEVAS......VELE.HAEYVKP.-EANGHVSVINGHTFYTCGDY....YYP...-CDQNNCFSQCFKKVGG...
A0A0U1WHG4_9ALPC/733-889             ..VKSIKVSFDLNGVVV...KATKRFKKFAATLVNLYREFVATVTKTIKIGSQAF--............--TYYAFEvpk........vllSGALHSVRTVKAKELN..LSV.............QDVIVEFN..VFDGA.T..VE.V..TPNRVEKEE......ISLE.EVEFIPP.-EGNGSIAVVDGYSFYSCGDL....YYP...-SNENAVVPLCFKRSGG...
R1AB_BCHK4/676-847                   ..LMHKLYVYTSCGYVA...-VAEHSSKIVQQVLDIMSKAMKLLHTNVSWAGTKLSAiiyegreallfnSGTYFCLSt............kAKTLQGQMNLVLPGDY..NKKtl.........giLDPVPNAD..---TI.D..VN.A..NSTVVDVVH......GQLE.PTNEHGP.SMIVGNYVLVSDKLFVRTEDE...eFYP...LCTNGKVVSTLFRLKGG...
F2YDB1_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
B8Q8U6_SARS/652-818                  ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngaleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
R1A_BCHK5/677-851                    .v-SERLYVYTSVGFVV...-VGDYSSQLLKQFMHILSKAMQLLHTTVSWAGSKLPSvvyngrdslvfpSGTYYCVSt............qGRSLQDQFDLVIPGDL..SKKqi.........giLEPTPNST..---TV.D..KK.I..NTNVVEVVV......GQLE.PTKEHSP.ELVVGDYVIISNKIFVRSVEDsetvFYP...LCTDGKIVPTLFRLKGG...
A3EXE7_BCHK5/677-851                 .v-SERLYVYTSVGFVV...-VGGYSSQLLKQFMHILSKAMQLLHTTVSWAGSKLPSvvynrrdslvfpSGTYYCVSt............qGRSLQDQFDLVIPGDL..SKKqi.........giLEPTPNST..---TV.D..KK.I..NTNVVEVVV......GQLE.PTKEHSP.ELVVGDYVIISNKIFVRSVEDsetvFYP...LCTDGKIVPTLFRLKGG...
B1PHI6_9ALPC/433-590                 ..LSQVLIVVRDGVIDIi.hNVPEAFKSAFEVFKDLVSGVFDLVVDHFKVANKKFKR............AGNYVLFE..............-NALACIVSAKVKGVK..QAG.............LKKLLYAK..AIVGA.T..VK.V..TVSRIETAT......VKLT.ECKPSKF.-VKKGNVAVINDIAFFHSDG-....VYRl.mSDSDEVYEDIAFTAEG-t..
H9TEX0_9ALPC/731-879                 lg--SVQLLIGNGVKVV...--CDGCKVFANQLSNGYNKLCNAARTDIEIGGIPFSTfk........tpTNTFIEMT..............-DAIYSVI--------..EQG.............-----KAL..SFGNA.D..VP.V.lDNGTISTDDws..epILLE.PAEYVKP.-KNNGNVIVIAGYTFYKDEDE...hFYP...-YGSGKIVQRMYNKMGG...
A0A059VJE6_9ALPC/739-895             .c-KHLKVSFGLDGIVV...TVARKFKRLGALLAEMYNTYLSTVVENLVLAGVSF--............--KYYATSvpk........ivlGCCFHSVKSVLASAFQ..IPV.............QAGVEKFK..VFLNC.V..HP.V..VPRVIETSF......VELE.ETTFKPP.-ALNGSIAIVDGFAFYYDGTL....YYP...-TDGNSVVPICFKKKGG...
A8JNZ1_9ALPC/433-591                 ..LCSAAFSVVDGVPVIv.cTVAERFSKAFTDFLSYTRECFTALCDDIVVFGVKCKA............VGDYIIFN..............-NSVVKTVKAKIKGVK..EAG.............LKTMTYTQ..CLLGP.T..KP.V..KVKRVERSV......AQLK.VVDTAVP.LKQEGECLVVGGRAMFRSDG-....YYRf.mADADVVLESPVFTA---gsq
A0A0K1RLM9_9ALPC/425-584             ..LCNSVFTIVNYKPTF..vVPNNRVKDLVDKCVKVLVKAFDVFTQNIIIAGIEAKCf.........vlGAKYLLFK..............-NALVKLVSVKILGKK..QKG.............LECAFFAT..SLVGA.T..AN.V..TSTRTETAT......ISLN.KVDDVVA.-PGDGYIVIVGDMAFYKSGE-....YYFm.mSSPNSVLTNNVFKA---vkv
B1PHJ3_9ALPC/434-591                 ..LTQVLIVVRNGVIDIi.hSVPEAFKSAFEIFKDLVTGVFDLVVDHFKIANKKFKR............AGDYILFE..............-NALACLVSGKIKGVK..QAG.............LKKLLYAK..AIVGA.T..VK.V..TVNRIESAT......VKLV.ECKPSNF.-VKKGSAVVINNIAFFHSDG-....VYRl.mSDSDEVYEDIAFTAE--sv.
A0A0K1Z0N1_SARS/652-818              ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDIVNKALEMCIDQVTIAGVKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAVVGTPVCVNGLMLLELKDKe..qYCA...LSPGLLATNNVFRLKGG...
R1A_CVPPU/425-584                    ..LCTSAFTIVNYKPTF..vVPDNRVKDLVDKCVKVLVKAFDVFTQIITIAGIEAKCf.........vlGAKYLLFN..............-NALVKLVSVKILGKK..QKG.............LECAFFAT..SLVGA.T..VN.V..TPKRTETAT......ISLN.KVDDVVA.-PGEGYIVIVGDMAFYKSGE-....YYFm.mSSPNFVLTNNVFKA---vkv
A0A0K2RW65_9BETC/672-845             ..VLHGFYMVVESSIYFv.kSVPSYARSVVQAFQDVVRVVLESLRVTFIKGLSVFKI............GRKRICFSgsnvyelerglldlS--------------H..LPSsvydltmpskiqkANQKPIYL..KGVGF.D..FS.L..SDDVVEVVT......ASII.PCGYSKP.PKIAEKICVVDNVYMAKAGDK....YYPv.vVDKQAGLLDQAWRIPC-a..
C0KYZ6_9BETC/671-832                 ..LVNGLFAVANGVITFv.qEVPELVKNFVDKFKTFFKVLIDSMSVSILSGLTVVKT............ASNRVCLA..............GSKVYEVVQKSLPAYI..MPV.............--GCSEAT..CLVGE.I..EPaV.fEDDVVDVVK......APLT.YQGCCKP.PSSFEKICIVDKLYMAKCGDQ....FYPvvvDNDTVGVLDQCWRFPCA...
H9TEW9_9ALPC/425-584                 ..LCTSAFTIVNYKPTF..vVSDNRVKDLVDKCVKVLVKAFDVFTQTITIAGIEAKCf.........vlGAKYLLFN..............-NALVKLVSVKILGKK..QKG.............LESAFFAT..SLVGA.T..VN.V..TPKRTETAN......ISLN.KVDDVAA.-PGEGYIVIVGDMAFYKSGE-....YYFm.mASPDSVLINNVFKAA--rv.
R1AB_SARS/652-818                    ..LITGVFDIVKGQIQV...-ASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSl.........nlGEVFIAQS..............-KGLYRQC---IRGKE..QLQll.........mpLKAPKEVT..FLEGD.S..HD.T..VLTSEEVVLkngeleALET.PVDSFTN.GAIVGTPVCVNGLMLLEIKDKe..qYCA...LSPGLLATNNVFRLKGG...
R1A_BCHK9/608-772                    ..LFKAQFTVVKGKFQF...-LRASLNSKCHSLCDLLTTIMSKLLTSVKWAGCKVDAl..........yTGTYYYFSrkg.......vlteVQLCAKRLGLLLTPKQ..QKMev.........evLDGDFDAP..-----.-..VT.L..TDLELEECT......GVLE.EVFGASDvKLVKGTLVSLASKLFVRTEDG...fLYR...YVKSGGVLGKAFRLRGG...
D9J203_9ALPC/728-877                 ..ITHVTCTFTGGLIKL...-LLDGYDALAGMITRGYQQLCKAKPFKLDVAGMTLSGft.......tpiGRDFLDFG..............----EDVVEIFCGGKT..R--.............--------..CFSGA.S..IP.V.sVDKVVEDDVw...stIILE.ETEYQPP.-KNGGVVVVIGGYTFYTTNHE...qFYP...-FGDSKVVQKLYNKAGG...
#=GC seq_cons                        ..lhssthslssuslhh....sscph+shspphhclhsphhchhpsslpluGtphcs............stsalshs...............sslhclsphhlpuhp..phs.............hpss.pss..sh.Gs.s..hs.l..sssplEsss......stLp..sstsss..sssGphlllsshsFhcss-t....aYs....sssshlhspsF+htuu...
//
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