#=GF ID CoV_NSP8
#=GF AC PF08717.13
#=GF DE Coronavirus replicase NSP8
#=GF PI nsp8;
#=GF AU Mistry J;0000-0003-2479-5322
#=GF AU Chuguransky S;0000-0002-0520-0736
#=GF SE pdb_2ahm
#=GF GA 72.80 72.80;
#=GF TC 119.00 119.00;
#=GF NC 26.70 25.20;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 16228002
#=GF RT Insights into SARS-CoV transcription and replication from the
#=GF RT structure of the nsp7-nsp8 hexadecamer.
#=GF RA Zhai Y, Sun F, Li X, Pang H, Xu X, Bartlam M, Rao Z;
#=GF RL Nat Struct Mol Biol. 2005;12:980-986.
#=GF RN [2]
#=GF RM 31138817
#=GF RT Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and
#=GF RT nsp8 co-factors.
#=GF RA Kirchdoerfer RN, Ward AB;
#=GF RL Nat Commun. 2019;10:2342.
#=GF RN [3]
#=GF RM 30918070
#=GF RT Identification and Characterization of a Human Coronavirus 229E
#=GF RT Nonstructural Protein 8-Associated RNA 3'-Terminal
#=GF RT Adenylyltransferase Activity.
#=GF RA Tvarogova J, Madhugiri R, Bylapudi G, Ferguson LJ, Karl N,
#=GF RA Ziebuhr J;
#=GF RL J Virol. 2019; [Epub ahead of print]
#=GF RN [4]
#=GF RM 22039154
#=GF RT The SARS-coronavirus nsp7+nsp8 complex is a unique multimeric
#=GF RT RNA polymerase capable of both de novo initiation and primer
#=GF RT extension.
#=GF RA te Velthuis AJ, van den Worm SH, Snijder EJ;
#=GF RL Nucleic Acids Res. 2012;40:1737-1747.
#=GF DR INTERPRO; IPR014829;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Viral NSP8 (non structural protein 8) forms a hexadecameric
#=GF CC supercomplex with NSP7 that adopts a hollow cylinder-like
#=GF CC structure [1]. The dimensions of the central channel and
#=GF CC positive electrostatic properties of the cylinder imply that it
#=GF CC confers processivity on RNA-dependent RNA polymerase [1]. NSP7
#=GF CC and NSP8 heterodimers play a role in the stabilisation of NSP12
#=GF CC regions involved in RNA binding and are essential for a highly
#=GF CC active NSP12 polymerase complex [2]. It has been demonstrated
#=GF CC that NSP8 acts as an oligo(U)-templated polyadenylyltransferase
#=GF CC but also has robust (mono/oligo) adenylate transferase
#=GF CC activities [3]. NSP8 has N- and C-terminal D/ExD/E conserved
#=GF CC motifs, being the N-terminal motif critical for RNA polymerase
#=GF CC activity as these residues are part of the Mg2-binding active
#=GF CC site [4].
#=GF SQ 115
#=GS C6GHE5_9ALPC/3568-3763 AC C6GHE5.1
#=GS A0A0U1WHF6_9ALPC/3594-3788 AC A0A0U1WHF6.1
#=GS Q6UZF5_SARS/3920-4116 AC Q6UZF5.1
#=GS A0A0U1UZ20_9ALPC/3775-3968 AC A0A0U1UZ20.1
#=GS A0A0U1WJY1_SARS/3917-4113 AC A0A0U1WJY1.1
#=GS D9J203_9ALPC/3547-3742 AC D9J203.1
#=GS A0A172B3C8_9ALPC/3499-3694 AC A0A172B3C8.1
#=GS R1AB_BC512/3674-3868 AC P0C6W0.1
#=GS R1A_IBVB/3463-3671 AC P0C6V3.1
#=GS A3EXI1_BCHK9/3778-3976 AC A3EXI1.1
#=GS Q6UZF1_SARS/3920-4116 AC Q6UZF1.1
#=GS A0A140H1G9_CVHK1/4003-4198 AC A0A140H1G9.1
#=GS B7U2L8_9BETC/3926-4121 AC B7U2L8.1
#=GS A0A060A4E9_9NIDO/3189-3356 AC A0A060A4E9.1
#=GS R1A_SARS2/3943-4139 AC P0DTC1.1
#=GS R1A_CVM2/3959-4154 AC P0C6U9.1
#=GS A0A023PN98_9GAMC/3445-3653 AC A0A023PN98.1
#=GS C6GHR9_9BETC/4007-4202 AC C6GHR9.1
#=GS B1PHI6_9ALPC/3868-4062 AC B1PHI6.1
#=GS R1AB_SARS/3920-4116 AC P0C6X7.1
#=GS R1AB_SARS/3920-4116 DR PDB; 2AHM E; 43-197;
#=GS R1AB_SARS/3920-4116 DR PDB; 2AHM G; 6-196;
#=GS R1AB_SARS/3920-4116 DR PDB; 2AHM H; 7-197;
#=GS R1AB_SARS/3920-4116 DR PDB; 5F22 B; 82-196;
#=GS R1AB_SARS/3920-4116 DR PDB; 2AHM F; 55-197;
#=GS A0A059VJE6_9ALPC/3663-3857 AC A0A059VJE6.1
#=GS R1AB_CVMA5/4011-4206 AC P0C6X9.1
#=GS A0A0U1UZ30_9ALPC/3608-3802 AC A0A0U1UZ30.1
#=GS C0KYT7_9BETC/4013-4208 AC C0KYT7.1
#=GS S5Z1D1_9ALPC/3705-3900 AC S5Z1D1.1
#=GS R1A_CVPPU/3558-3753 AC P0C6V2.1
#=GS A0A125R5A3_9ALPC/3570-3765 AC A0A125R5A3.1
#=GS A0A0U1WHD1_9ALPC/3768-3961 AC A0A0U1WHD1.1
#=GS R1AB_FIPV/3583-3778 AC Q98VG9.2
#=GS R1AB_FIPV/3583-3778 DR PDB; 3UB0 A; 1-192;
#=GS R1AB_FIPV/3583-3778 DR PDB; 3UB0 D; 1-191;
#=GS R1AB_BC279/3926-4122 AC P0C6V9.1
#=GS B1PHK1_9ALPC/3775-3968 AC B1PHK1.1
#=GS R1AB_CVM2/3959-4154 AC P0C6X8.1
#=GS A0A0A7UXS1_9BETC/3973-4168 AC A0A0A7UXS1.1
#=GS R1AB_BCHK4/3973-4170 AC P0C6W3.1
#=GS E3W5I8_9ALPC/3570-3765 AC E3W5I8.1
#=GS E3W5I9_9ALPC/3570-3765 AC E3W5I9.1
#=GS R1AB_BC133/3980-4177 AC P0C6W1.1
#=GS A0A0F6SKM6_9GAMC/3493-3699 AC A0A0F6SKM6.1
#=GS R1A_BCHK4/3973-4170 AC P0C6T4.1
#=GS A0A0K1Z0N1_SARS/3920-4116 AC A0A0K1Z0N1.1
#=GS A0A1X9JQL5_9ALPC/3521-3715 AC A0A1X9JQL5.1
#=GS A0A4D6FTD3_9GAMC/3330-3540 AC A0A4D6FTD3.1
#=GS A0A172B201_9ALPC/3499-3694 AC A0A172B201.1
#=GS R1A_BCHK9/3783-3981 AC P0C6T6.1
#=GS A0A2Z4EVM4_9NIDO/3740-3938 AC A0A2Z4EVM4.1
#=GS A0A0S2ZX33_9GAMC/3462-3668 AC A0A0S2ZX33.1
#=GS Q5DIC6_SARS/3920-4116 AC Q5DIC6.1
#=GS I1VWF4_CVH22/3634-3828 AC I1VWF4.1
#=GS A0A1B3Q5W8_9BETC/3825-4023 AC A0A1B3Q5W8.1
#=GS A0A1L2KGB4_9ALPC/3631-3825 AC A0A1L2KGB4.1
#=GS A0A140ESF0_9NIDO/3189-3356 AC A0A140ESF0.1
#=GS R1A_BCHK5/4020-4217 AC P0C6T5.1
#=GS A0A0U1WHB2_9ALPC/3811-4005 AC A0A0U1WHB2.1
#=GS A0A0U1WHG1_9ALPC/3479-3673 AC A0A0U1WHG1.1
#=GS H9BR16_9NIDO/3154-3335 AC H9BR16.1
#=GS Q5DIC7_SARS/3920-4116 AC Q5DIC7.1
#=GS R9QTH2_SARS/3921-4117 AC R9QTH2.1
#=GS R1A_BC512/3674-3868 AC P0C6F6.1
#=GS C6GHE4_9ALPC/3568-3763 AC C6GHE4.1
#=GS B7U2M9_9BETC/3926-4121 AC B7U2M9.1
#=GS B2BW31_9GAMC/3449-3641 AC B2BW31.1
#=GS R1AB_SARS2/3943-4139 AC P0DTD1.1
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BTF D; 84-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7CYQ B; 6-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BV1 D; 85-189;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7DCD H; 77-190;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6M5I B; 82-196;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7D4F B; 78-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7D4F G; 84-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6YHU B; 76-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7CXM D; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BV1 B; 78-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7CXN B; 6-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6XQB D; 84-114;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7KRN B; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6M71 D; 84-132;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6XEZ B; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BW4 B; 78-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7KRO B; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6YYT B; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7DCD B; 77-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7CXN D; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6XEZ D; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7CXM B; 6-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BZF D; 84-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6YHU D; 76-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7B3D B; 77-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6M71 B; 78-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7DCD F; 77-189;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6WTC D; 78-193;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6WTC B; 79-194;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7AAP B; 78-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7KRP B; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7CYQ D; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7KRO D; 7-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6XQB B; 78-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7KRN D; 7-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BTF B; 67-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7C2K D; 53-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7DCD D; 77-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7B3C B; 77-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BZF B; 79-192;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7B3B B; 77-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7AAP D; 84-111;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BW4 D; 84-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 6YYT D; 6-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7BV2 B; 78-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7KRP D; 7-191;
#=GS R1AB_SARS2/3943-4139 DR PDB; 7C2K B; 76-192;
#=GS R1AB_CVPPU/3558-3753 AC P0C6Y5.1
#=GS R9QTB2_SARS/3912-4108 AC R9QTB2.1
#=GS H9BR24_9NIDO/3134-3318 AC H9BR24.1
#=GS R1A_BC279/3926-4122 AC P0C6F5.1
#=GS A0A096XNJ3_9ALPC/3625-3819 AC A0A096XNJ3.2
#=GS H9BQZ9_9NIDO/3199-3366 AC H9BQZ9.1
#=GS R1AB_BCHK9/3783-3981 AC P0C6W5.1
#=GS U5WI49_SARS/3920-4116 AC U5WI49.1
#=GS U5KNA9_9BETC/3992-4189 AC U5KNA9.1
#=GS A0A088DIE1_9BETC/4087-4283 AC A0A088DIE1.1
#=GS A0A0F6WGL5_9GAMC/3493-3699 AC A0A0F6WGL5.1
#=GS A0A240FW17_9ALPC/3214-3406 AC A0A240FW17.1
#=GS R1A_CVMA5/4011-4206 AC P0C6V0.1
#=GS T2B9I2_MERS/3929-4126 AC T2B9I2.1
#=GS S5YAF0_9ALPC/3705-3900 AC S5YAF0.1
#=GS R1AB_CVH22/3630-3824 AC P0C6X1.1
#=GS U5WLB9_SARS/3920-4116 AC U5WLB9.1
#=GS H9TEW9_9ALPC/3559-3754 AC H9TEW9.1
#=GS A0A0K1YZY7_SARS/3920-4116 AC A0A0K1YZY7.1
#=GS K4K1U5_9ALPC/3659-3853 AC K4K1U5.1
#=GS T2B9U0_MERS/3929-4126 AC T2B9U0.1
#=GS U5LR11_9BETC/3992-4189 AC U5LR11.1
#=GS A0A0U1UZC3_9ALPC/3534-3728 AC A0A0U1UZC3.1
#=GS A0A0U1WHG4_9ALPC/3621-3815 AC A0A0U1WHG4.1
#=GS A0A023YA54_MERS/4030-4227 AC A0A023YA54.1
#=GS R1A_SARS/3920-4116 AC P0C6U8.1
#=GS R1A_SARS/3920-4116 DR PDB; 6NUR B; 77-191;
#=GS R1A_SARS/3920-4116 DR PDB; 6NUS B; 80-191;
#=GS R1A_SARS/3920-4116 DR PDB; 6NUR D; 84-192;
#=GS I7AWB5_9BETC/4016-4211 AC I7AWB5.1
#=GS A0A0K2RW65_9BETC/3961-4156 AC A0A0K2RW65.1
#=GS A0A0K2RVJ3_9BETC/3961-4156 AC A0A0K2RVJ3.1
#=GS A8JNZ1_9ALPC/3605-3799 AC A8JNZ1.1
#=GS B2BW32_9GAMC/3449-3641 AC B2BW32.1
#=GS B1PHI7_9ALPC/3868-4062 AC B1PHI7.1
#=GS R1A_BC133/3980-4177 AC P0C6F7.1
#=GS A8JNZ0_9ALPC/3605-3799 AC A8JNZ0.1
#=GS D9J202_9ALPC/3547-3742 AC D9J202.1
#=GS B6VDX7_THCOV/3168-3337 AC B6VDX7.1
#=GS R1AB_BCHK5/4020-4217 AC P0C6W4.1
#=GS I7B5F2_9BETC/4016-4211 AC I7B5F2.1
#=GS A0A1L2KGB5_9ALPC/3631-3825 AC A0A1L2KGB5.1
#=GS H9BR34_9NIDO/3092-3261 AC H9BR34.1
#=GS C6GHR8_9BETC/4007-4202 AC C6GHR8.1
#=GS A0A125R5A4_9ALPC/3570-3765 AC A0A125R5A4.1
#=GS Q9J3E9_9BETC/4010-4205 AC Q9J3E9.1
#=GS A0A2H4MZ81_9NIDO/3276-3471 AC A0A2H4MZ81.1
#=GS I1VWF3_CVH22/3634-3828 AC I1VWF3.1
#=GS R1A_CVH22/3630-3824 AC P0C6U2.1
#=GS A0A4D6FWB1_9GAMC/3330-3540 AC A0A4D6FWB1.1
#=GS H9TEX0_9ALPC/3559-3754 AC H9TEX0.1
#=GS A0A0U1UZA8_9ALPC/3811-4005 AC A0A0U1UZA8.1
#=GS A3EXH3_BCHK9/3758-3956 AC A3EXH3.1
#=GS B1PHK0_9ALPC/3775-3968 AC B1PHK0.1
#=GS R1AB_IBVB/3463-3671 AC P0C6Y1.1
#=GS A3EXI9_BCHK9/3778-3976 AC A3EXI9.1
C6GHE5_9ALPC/3568-3763 ...SVASAYAALPSWIAYEKARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAASATRLIVVTPNLEVLSKVRQENNVHYAGAIWSIVEVKDANGAQVHLKEVTAA........NELNITWPLSITCERTT--..---klqn..........
A0A0U1WHF6_9ALPC/3594-3788 ...SVASAFANMPSFIAYEKARMNYEDA...IANDAS..PAVIKQLKKAMNTAKGEFDHESSVQKKIQRMADAAAAQMYKDARAVDRKSKVVSAMHSLLFGMLRKLDMSSINQLMELAKDGCIPMAIIPAAAATKLTVITPDLESFSKIRVDNNIYYAGAAWSITDVKDADGRVVILKEVNVD........NKDALVWPLHVNCERV---..V--klq...........
Q6UZF5_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
A0A0U1UZ20_9ALPC/3775-3968 ...SVASTFVNMPSFIAYETARQNYEDA...TNNGSS..PQLVKQLKRAMNIAKAEFDHEAAVQRKIQRMAEQAASQMYKEARAVNRKSKVISSMHALLFGMLRKLDMSAIDTILNLARGGVVPLNIIPAACATKLVVVASDHESFTRVYQQGAVHYAGAVWTLSEVKDNDGKPVHVKEITKD........N-TALTWPLVLNCERV---..V--klq...........
A0A0U1WJY1_SARS/3917-4113 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
D9J203_9ALPC/3547-3742 ...SVASAYASLPSWVAYEQARDAYMEG...KKNDVA..PQVLKQLQKAMNIAKAEFDREASVQKKLDRMAEQAASNMFKEARAVDRKSKIIGAMHSLLFSMLKRLDMSSVNTLIDQARNGCLPLSIIPAASATRLVVVTPNIDVFSKVRLENNVHYAGAVWSIIEVRDSNSSIVHLKEVTQA........NEQNLCWPLTVTCERVS--..---klqn..........
A0A172B3C8_9ALPC/3499-3694 ...SVASAYANLPSWVAYEQARDAYMEG...KKNDLA..APVIKQLQKAMNIAKAEFDREASVQKKLDRMAEQAASNMFKEARAVDRKSKIIGAMHSLLFGMLKKLDMSSVNTIMEQARNGCLPLSIIPAASATRLVVVTPNIEVFSKIRLDNNVHYAGVVWSIVEVRDANSAVVHLKEVTQH........NEQNMCWPLTVTCERVA--..---qlqn..........
R1AB_BC512/3674-3868 ...SVAATYVNLPSYLAYETARQSYEDA...LANGSP..PQLVKQLRHAMNVAKSEFDREASTQRKLDRMAEQAASQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILSLAKDGVVPLSIIPAVSATKLNIVVSDIESYSKIQREGCVHYAGVIWSVVDIKDNDGKPVHAKEVVTS........NVESLAWPLFLNCERI---..---iklq..........
R1A_IBVB/3463-3671 ...SVTQEFSHIPSYAEYERAKNLYEKVlvdSKNGGV.tQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVIPDPETWVKCVEGVHVTYSTVVWNIDTVIDADGTELHPTSTGSGlt...yciSGANIAWPLKVNLTRNGHN.kV--dvvl..........
A3EXI1_BCHK9/3778-3976 ...AVASEFSNLSSYVDYENAQKAYDTA...VATGAP..ASTVNALKKAMNIAKSVLDKDVATTRKLERMSELAMTAMYKQARAEDRRSKVTAAMQTMLFNMIRRLDSDALSNILNNARNGVVPLGVIPRTSANKLLLVVPDFSVYTATITMPTLTYAGSAWDVMQVADADGKPVNATDITRE........NSVNLAWPLVVTAQRQQATspV--kl............
Q6UZF1_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
A0A140H1G9_CVHK1/4003-4198 ...ALQSEFVNMASFVEYEVAKKNLADA...KNSGSV.nQQQIKQLEKACNIAKSVYERDKAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLSAIPALAANTLTIIIPDKQVFDKVVDNVYVTYAGSVWHIQTVQDADGINKQLTDISVD........S----NWPLVIIANRYNEV..---anavm.........
B7U2L8_9BETC/3926-4121 ...ALQSEFVNMASFVEYEVAKKNLDEA...RSSGSA.nQQQLKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLAANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLNEISDD........C----NWPLVIIANRHNEV..---satvl.........
A0A060A4E9_9NIDO/3189-3356 ..a-VADININLDSYRIYKEADAIYKRS...VEMNES..PQEQKKKLKAVNIAKAEWEREAASQRKLEKLADAAMKSMYLAERAEDRRIKLTSGLTAMLYHMLRRLDSDRVKALFECAKAQILPIHAVVGISNDNLKVIFNDKDSYSHYVEGNTLIHKGVRYTIVK-----------------........-------------------..---klsldnapie....
R1A_SARS2/3943-4139 ...AIASEFSSLPSYAAFATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMD........NSPNLAWPLIVTALRANSA..VKL..............
R1A_CVM2/3959-4154 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMIRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDV-........---NITWPLVIAANRHNEVssVV-l.............
A0A023PN98_9GAMC/3445-3653 ...SVTQEFSHIPSYAEYERAKNLYEKVladSKNGGV.tQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVIPDPETWVKCVEGMHVTYSTVVWNIDTVIDADGTELHPTSTGSGlt...ycvSGDNIAWPLKVSLTRNGHN.rV--dval..........
C6GHR9_9BETC/4007-4202 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVN........S----IWPLVIAANRHNEVstV--vl............
B1PHI6_9ALPC/3868-4062 ...SVASTFVNMPSFMAYENARQSYEEA...INNGSS..PQLVKQLKRAMNIAKAELDHESSVQRKLNRMAEQAAAQMYKEARAVNKKSKVISSLHTLLFGMLRKLDMSSVDNILSLARDGVVPLSIIPAACATKLTIVVSDFESFKRIFQLGNVQYAGVVWSLIEVKDNDGKPVHVKEITAT........N-TALTWPLILNCERV---..V--klqn..........
R1AB_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
#=GR R1AB_SARS/3920-4116 SS ...XXGGCSTTSHHHHHHHHHHHHHHHH...HHTTXX..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHTT-EESS----STT-EEEEEE-SHHHHHHHEETTEEEETTEEEEEEEEE-TTS-B--GGG-STT........TGGGS-SSEEEEEEEE-XX..XXX..............
A0A059VJE6_9ALPC/3663-3857 ...SVASTYVGLPSYVIYENARQQYEDA...VNNGSP..PQLVKQLRHAMNVAKSEFDREASTQRKLDRMAEQAAAQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNLAKDGVVPLSVIPAVSATKLNIVTSDIDSYNRIQREGCVHYAGTIWNIIDIKDNDGKVVHVKEVTAQ........NAESLSWPLVLGCERI---..---vklq..........
R1AB_CVMA5/4011-4206 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVN........S----TWPLVIAANRHNEVstV--vl............
A0A0U1UZ30_9ALPC/3608-3802 ...SVASTFVNMPSFIAYENARQAYEDA...INSGAA..QQLVKQLKRAMNIAKSEFDHEASVQKKISRMAEQAAAQMYKEARAVNRKSKVISAMHSLLFGMLRRLDMSSVDTILNLAKDGVVPLSIIPAASATKLNVVSADLESYLKICKEGCVHYAGVIWNVIDIRDNDGKLVHMKEVTQE........NVENLAWPLFLNCERI---..---vklq..........
C0KYT7_9BETC/4013-4208 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVN........S----TWPLVIAANRHNEVstV--vl............
S5Z1D1_9ALPC/3705-3900 ...AVATTYANMPSYIMYENARQAYEEA...ISNRSS..PQLIKQLKHAMNRAKGEFDHEAATQRKIDRMAEQAAAQMFKEARAVNKKSKVTSAMHAMLFSMLRRLDMSSVDIILNLARNGTVPLSIIPALCATRLSIIVSDFESYAKLFREGCIHYAGTIWSVADIKNNDGKPVHQKEVTSS........NAENLSWPLCINAERI---..---vklqn.........
R1A_CVPPU/3558-3753 ...SVASAYAALPSWIALEKARADLEEA...KKNDVS..PQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVITPSLEVFSKIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAA........NELNLTWPLSITCERTT--..---klqn..........
A0A125R5A3_9ALPC/3570-3765 ...SVASAYAALPSWIAYEKARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNLEVLSKIRQENNVHYAGAIWSIVEVKDANGASVHLKEVTAT........NELNITWPLSLTCERTT--..---klqn..........
A0A0U1WHD1_9ALPC/3768-3961 ...SVASTFVNMPSFIAYETARQNYEDA...TNNGSS..PQLVKQLKRAMNIAKAEFDHEAAVQRKIQRMAEQAASQMYKEARAVNRKSKVISSMHALLFGMLRKLDMSAIDTILNLARGGVVPLNIIPAACATKLVVVASDFESFKRIYQYGAVHYAGAVWTLAEVKDNDGKPVHVKEITND........N-TALTWPLVLNCERV---..V--klq...........
R1AB_FIPV/3583-3778 ...SVASAYAALPSWIAYEKARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAASATRLIVVTPNLEVLSKVRQENNVHYAGAIWSIVEVKDANGAQVHLKEVTAA........NELNITWPLSITCERTT--..---klqn..........
#=GR R1AB_FIPV/3583-3778 SS ...SSS-HHHHHHHHHHHHHHHHHHHHH...HHCT--..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCHHHH---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTT-EEEEEE--TTS-EEEEEE-SHHHHHHHEETTEEEETTEEEEEEEEE-TTS-B--CCC--GG........GGGGS-S-EEEEEEE-X--..---XXXX..........
R1AB_BC279/3926-4122 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSQNLAWPLIVTALRANSA..VKL..............
B1PHK1_9ALPC/3775-3968 ...SVASTFVNMPSFIAYETARQNYEDA...TNNGSS..PQLVKQLKRAMNIAKAEFDHEAAVQRKIQRMAEQAASQMYKEARAVNRKSKVISSMHALLFGMLRKLDMSAIDTILNLARGGVVPLNIIPAACATKLVVVASDHESFTRVYQQGAVHYAGAVWTLSEVKDNDGKPVHVKEITKD........N-TALTWPLVLNCERV---..V--klq...........
R1AB_CVM2/3959-4154 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMIRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDV-........---NITWPLVIAANRHNEVssVV-l.............
A0A0A7UXS1_9BETC/3973-4168 ...ALQSEFVNMASFVEYEIAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLSAIPSLTANSLTIIVPDKTVYDQVVDNVYIAYAGNVWHIQSIQDADGTVKQLNEINES........----VNWPIVVTATRYNEV..---sttvm.........
R1AB_BCHK4/3973-4170 atl---TEFSHLATYAELETAQSSYQKA...LNSGDA.sPQVLKALQKAVNVAKNAYEKDKAVARKLERMAEQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGVIANARNGCVPLSIVPLCASNKLRVVIPDISVWNKVVNWPSVSYAGSLWDITVINNVDNEVVKPTDVVET........N-ESLTWPLVIECSRSSSS.aVKL..............
E3W5I8_9ALPC/3570-3765 ...SVASAYAALPSWIAYEQARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAASATRLIVVTPNLEVLSKVRQENNVHYAGAIWSIVEVKDANGAQVHLKEVTAA........NELNLTWPLNITCERTT--..---klqn..........
E3W5I9_9ALPC/3570-3765 ...SVASAYAALPSWIAYEQARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAASATRLIVVTPNLEVLSKVRQENNVHYAGAIWSIVEVKDANGAQVHLKEVTAA........NELNLTWPLNITCERTT--..---klqn..........
R1AB_BC133/3980-4177 atl---TEFSHLATYAELETAQSSYQKA...LNSGDA.sPQVLKALQKAVNVAKNAYEKDKAVARKLERMAEQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGVIANARNGCVPLSIVPLCASNKLRVVIPDISVWNKVVNWPSVSYAGSLWDVTVINNVDNEVVKPTDVVET........N-ESLTWPLVIECSRASSS.aVKL..............
A0A0F6SKM6_9GAMC/3493-3699 ...SVTQEFSHIPSYAEYERAKDLYEKVladSKNGSV.tQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVVPDPETWVKCVEGMLVTYSTVVWNIDTVFDADGVEIQPSSNGQSlv...yhiGGDRIAWPLKVNLTRNVHN..---kvea..........
R1A_BCHK4/3973-4170 atl---TEFSHLATYAELETAQSSYQKA...LNSGDA.sPQVLKALQKAVNVAKNAYEKDKAVARKLERMAEQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGVIANARNGCVPLSIVPLCASNKLRVVIPDISVWNKVVNWPSVSYAGSLWDITVINNVDNEVVKPTDVVET........N-ESLTWPLVIECSRSSSS.aVKL..............
A0A0K1Z0N1_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIIQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
A0A1X9JQL5_9ALPC/3521-3715 ...SVASTFASMPSYIAYEKAKMDYEQA...KQNGTS..DQVVRQLLKAMNIAKSEFDLELSVQRKLNRMADNAAAQMFKDARNVDRKAKVVSSMHGLLVAMLRRLDMSSINELMDLAKDGILPLAVIPAAASNRLVVVTPSIEAFDKIRHDNSICYAGSVWTITAIKDVDGTSVQLAEVCAG........CDGALNWPLHIEAERI---..---vklq..........
A0A4D6FTD3_9GAMC/3330-3540 ...AVVSEFSHIPSYTDYEKARAAYEEIqaqVKRGIVisPQEVAAYRKAANIAKATFDRDLAVQKKLDAMAERAMTSMYKEARVNDRKAKLVSSLHALLFSMLKKIDSDKLNTLFEQAQNGVVPLASVPIVCSNKLTLVIPDLDIWNKCVENDVVTYSGVVWNIDSIFDGDDNEVKPQFVRRDnitvpyydIKPDMAWPLKLSLVRNTHN.kIV-l.............
A0A172B201_9ALPC/3499-3694 ...SVASAYANLPSWVAYEQARDAYMEG...KKNDLA..APVIKQLQKAMNIAKAEFDREASVQKKLDRMAEQAASNMFKEARAVDRKSKIIGAMHSLLFGMLKKLDMSSVNTIMEQARNGCLPLSIIPAASATRLVVVTPNIEVFSKIRLDNNVHYAGVVWSIVEVRDANSAVVHLKEVTQH........NEQNMCWPLTVTCERVA--..---qlqn..........
R1A_BCHK9/3783-3981 ...AVASEFSNLSSYVDYENAQKAYDTA...VATGAP..ASTVNALKKAMNVAKSVLDKDVATTRKLERMSELAMTAMYKQARAEDRRSKVTAAMQTMLFNMIRRLDSDALSNILNNARNGVVPLGVIPRTAANKLLLVVPDFSVYTATITMPTLTYAGSAWDVMQVADADGKTVNATDITRE........NSVNLAWPLVVTAQRQQATspV--kl............
A0A2Z4EVM4_9NIDO/3740-3938 ...AVASEFSNLASYVDYENAQKAYDTA...VSTGAP..ASTIKALKKAMNVAKSVLDKDVAVARRLERMSEIAMTTMYKQARAEDKRSKVTSAMQTMLFNMIRRLDSDALSNILNNARNGVVPLGVIPRTAANKLMLVVPDYSVFSSTITLPVLTYAGSAWDVVQIADADAKAVNTTDITRE........NSPNLAWPLVVTAQRQQATspV--kl............
A0A0S2ZX33_9GAMC/3462-3668 ...SVTQEFSHIPSYAEYERAKNLYEKVladSKNGGV.tQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLRKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVIPDPETWVKCVEGMHVTYSTVVWNIDTVIDADGTELHPTSIGSGlt...yciSGDNIAWPLKVNLTRNGHN..---kvda..........
Q5DIC6_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIVPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
I1VWF4_CVH22/3634-3828 ...SVASSFVGMPSFVAYETARQEYENA...VANGSS..PQIIKQLKKAMNVAKAEFDRESSVQRKINRMAEQAAAAMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNMARNGVVPLSVIPATSASKLVVVVPDHDSFARMMVDGFVHYAGVVWTLQEVKDNDGKNVHLKDVTKE........NQETLVWPLILTCERV---..V--klq...........
A0A1B3Q5W8_9BETC/3825-4023 ...AVASEFSNLSSYVDYENAQKAYDTA...VTTGAP..VSTIKALKKAMNVAKSVLDKDVATARKLERMSEMAMTAMYKQARAEDKRSKVTSAMQTMLFNMIRRLDSDALNSILTNARNGIVPLGVIPRTAANKLLLVVPDYSVFSSTVVLPTLTYAGSAWDVTQVSDADGKNVNVTDITRE........NSANLAWPLVITAVRQVA-..---tspvkl........
A0A1L2KGB4_9ALPC/3631-3825 ...SVASSFVSMPSYIAYENARQAYEDA...VANGSS..PQLVKQLKRAMNIAKSEFDHEISVQKKISRMAEXAATQMYKEARAVNRKSKVISAMHSLLFGMLRRLDMSSVETVLNLARDGVVPLSIIPATSASKLTIVSPDLESYSKIVCDGSVHYAGVVWTLNDVKDNDGRPVHVKEITKE........NVETLTWPLVLSCERV---..V--klq...........
A0A140ESF0_9NIDO/3189-3356 ..a-VADININLDSYRIYKEADAIYKRS...VEMNES..PQXQKKKLKAVNIAKAEWEREAASQRKLEKLADAAMKSMYLAERAEDRRIKLTSGLTAMLYHMLRRLDSDRVKALFECAKAQILPIHAVVGISNDNLKVIFNDKDSYSHYVEGNTLIHKGVRYTIVK-----------------........-------------------..---klsldnapie....
R1A_BCHK5/4020-4217 .at--LSEFSHLASYAELEAAQSSYQKA...LNSGDA.sPQVLKALQKAVNIAKNAYEKDKAVARKLERMAEQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGVISNARNGCVPLSVVPLCASNKLRVVIPDITIWNKVVTWPSLSYAGALWDISLINNVDGEVVKSSDVTET........N-ESLTWPLVLECTRAASS..---avtl..........
A0A0U1WHB2_9ALPC/3811-4005 ...SVASTFVNMPSFIAYESARQSYEEA...INNGSS..PQLVKQLKRAMNIAKAELDHESSVQRKLNRMAEQAAAQMYKEARAVNKKSKVISSLHTLLFGMLRKLDMSSVDNILSLARDGVVPLSIIPAACATKLTIVVSDFESFKRIFQLGNVQYAGVVWSLTEVKDNDGKPVHIKEITAN........N-TALTWPLVLNCERI---..---vklqn.........
A0A0U1WHG1_9ALPC/3479-3673 ...SVAATFVNMPSYIAYETARQEYENA...VNTDAS..QSVVKQLRKAMNVAKAEFDKEASVQRKINRMAEAAATQMYKEARAVNKKSKVISSLHAMLFSMLRRLDMSSIDNILSLARDGTVPLSIIPTACATKLTVVCSDIESFSKVVFDNCVQYAGVVWNIIDIRDGDGKIVHLKEVNKD........NVDVLSWPLFVNCERM---..---vklq..........
H9BR16_9NIDO/3154-3335 ..v-VADAFIHLDSYKIYKDAQQAYDEA...VERGAE..ASEIKKALKAVNIAKAEYDRDVAAEKKLAKLADSALKSMYLAERSEDRKAKLTSGLTAMLYHMLRRVDSDKVKALFELAKSDVIPLHAITGSSTDGLKVIIGDQQTYEQYVTGNQVIFRGRTYVINTMYDLDNQILQEK-----........-------------------..---pqsfpivlectk..
Q5DIC7_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIVPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
R9QTH2_SARS/3921-4117 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKCLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
R1A_BC512/3674-3868 ...SVAATYVNLPSYLAYETARQSYEDA...LANGSP..PQLVKQLRHAMNVAKSEFDREASTQRKLDRMAEQAASQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILSLAKDGVVPLSIIPAVSATKLNIVVSDIESYSKIQREGCVHYAGVIWSVVDIKDNDGKPVHAKEVVTS........NVESLAWPLFLNCERI---..---iklq..........
C6GHE4_9ALPC/3568-3763 ...SVASAYAALPSWIAYEKARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAASATRLIVVTPNLEVLSKVRQENNVHYAGAIWSIVEVKDANGAQVHLKEVTAA........NELNITWPLSITCERTT--..---klqn..........
B7U2M9_9BETC/3926-4121 ...ALQSEFVNMASFVEYEVAKKNLDEA...RSSGSA.nQQQLKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLAANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLNEISDD........C----NWPLVIIANRHNEV..---satvl.........
B2BW31_9GAMC/3449-3641 ...AVTDEFCALPSYVDYEKARAAYEEI...QKNSTN..PQEIKAYKKAMNIAKSVLDRDIAVQKKLDAMAERAMSTMYKEAKSSEKKTRLVSSLHALLFSMIKRLDSDQVADVFEKARNGVVPLASVPITCSNKLTIVIPDMSLWEKVVVHDYVVYGNIVWDINEVVDMDGNQILPCRVSGE........A----SWPLEVRLVRNGKL..---vgd...........
R1AB_SARS2/3943-4139 ...AIASEFSSLPSYAAFATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMD........NSPNLAWPLIVTALRANSA..VKL..............
#=GR R1AB_SARS2/3943-4139 SS ...XXXXXXTTSHHHHHHHHHHHHHHHH...HHHTXX..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHSTEEESSHHHHHHTSEEEEEESSHHHHHHHEETTEEEETTEEEEEEEEEETTSSBE-GTCSSTT........TGGGS-SSEEEEEEEESXX..XXX..............
R1AB_CVPPU/3558-3753 ...SVASAYAALPSWIALEKARADLEEA...KKNDVS..PQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVITPSLEVFSKIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAA........NELNLTWPLSITCERTT--..---klqn..........
R9QTB2_SARS/3912-4108 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
H9BR24_9NIDO/3134-3318 vvs---DSAIALDSYRVFKDAEAVYLKS...VEDNEP..LAEQKRKLKIANIAKSEWDRDAAANRKLEKLADQAMKAMYLAERSEDRRIKLTSGLTSMLYHMLRRVNSDRIAALFECAKSHVVPIHAIAGSSTEGLKLIIDNQETYNKYVINNGVVYRGTCYNIVKVVDLDNANVTLPP----........-------------------..---ttypvvvectaair
R1A_BC279/3926-4122 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSQNLAWPLIVTALRANSA..VKL..............
A0A096XNJ3_9ALPC/3625-3819 ...SVASTFASMPSYIAYEKAKMDYELA...KQNGTS..DQVVRQLLKAMNIAKSEFDLELSVQRKLNRMADNAAAQMFKDARNVDRKAKVVSSMHGLLVGMLRRLDMSSITELMDLAKDGILPLAVIPAAASNRLIVVTPSIEAFDKIRHDNSICYAGAAWAITAIKDVDGTTVQLAEVCSN........NDKTLNWPLHIEAERV---..V--klq...........
H9BQZ9_9NIDO/3199-3366 ..a-VADININLDSYRIYKEADAIYKRS...VEMNES..PQEQKKKLKAVNIAKAEWEREAASQRKLEKLADAAMKSMYLAERAEDRRIKLTSGLTAMLYHMLRRLDSDRVKALFECAKQQILPIHAVVGISNDNLKVIFNDKDSYSHYVEGNTLIHKGVRYTIVK-----------------........-------------------..---klsldnalie....
R1AB_BCHK9/3783-3981 ...AVASEFSNLSSYVDYENAQKAYDTA...VATGAP..ASTVNALKKAMNVAKSVLDKDVATTRKLERMSELAMTAMYKQARAEDRRSKVTAAMQTMLFNMIRRLDSDALSNILNNARNGVVPLGVIPRTAANKLLLVVPDFSVYTATITMPTLTYAGSAWDVMQVADADGKTVNATDITRE........NSVNLAWPLVVTAQRQQATspV--kl............
U5WI49_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
U5KNA9_9BETC/3992-4189 stl---TEFSHLASYAELETAQKSYQEA...VASGDA.sPQMLKALQKAVNVAKNTYEKDKSIARKLERMAEQAMTSMYKQARAEDKKSKIVSAMQTMLFGMIKKLDNDVLNGIISNARNGCVPLSIIPLCASNKLRVVIPDMQIWKQVVTYPVLSYAGALWDITLINNVDGEVVRPSDVIDT........N-EGLTWPLLLECTRAVAS.aVK-l.............
A0A088DIE1_9BETC/4087-4283 ...AVSNEFNNLPTFVEYECAQKAYDEA...LANGEG..PIVLKQLKKAVNCAKSAFERDAAVARKLERMADLAMTQMYKEARAEDKRARVTSAMQSMLFSMLRRLDNDALNNIITNARDGCVPLNVIPMLASSKLLIVVPDISVYNNTVEGTLLTYAGAVWDVVQVTDADNKPIAMGDITID........TAPTLAWPLVLSAVRRVSA..TKL..............
A0A0F6WGL5_9GAMC/3493-3699 ...SVTQEFSHIPSYAEYERAKDLYEKVladSKNGSV.tQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVVPDPETWVKCVEGMLVTYSTVVWNIDTVFDADGVEIQPSSNGQSlv...yhiGGDRIAWPLKVNLTRNVHN..---kvea..........
A0A240FW17_9ALPC/3214-3406 ...SVASTFASLPSFVAYETAREAYEKA...LKEEAN..AVLLKQLKKAMNIAKSEHEQEVAVQRKLERLAETAAAQMYKDVRASDKKAKVISAMHSMLFSMLRRLDMSSVDNVLNLAKDGVVPLSIVPVTSASRMIVVVPTKDVLDRIVTDNSVIYAGVVWTIIDIKDVDNKVINLKEVMIG........D--DIAYPLHITVERF---..---vklq..........
R1A_CVMA5/4011-4206 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVN........S----TWPLVIAANRHNEVstV--vl............
T2B9I2_MERS/3929-4126 .at--LSEFSHLATFAELEAAQKAYQEA...MDSGDT.sPQVLKALQKAVNIAKNAYEKDKAVARKLERMADQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGIISNARNGCIPLSVIPLCASNKLRVVIPDFTVWNQVVTYPSLNYAGALWDITVINNVDNEIVKSSDVVD-........SNENLTWPLVLECTRASTS.aVKL..............
S5YAF0_9ALPC/3705-3900 ...AVATTYANMPSYIMYENARQAYEEA...ISNRSS..PQLIKQLKHAMNRAKGEFDHEAATQRKIDRMAEQAAAQMFKEARAVNKKSKVTSAMHAMLFSMLRRLDMSSVDIILNLARNGTVPLSIIPALCATRLSIIVSDFESYAKLFREGCIHYAGTIWSVADIKNNDGKPVHQKEVTSS........NAENLSWPLCINAERI---..---vklqn.........
R1AB_CVH22/3630-3824 ...SVASSFVGMPSFVAYETARQEYENA...VANGSS..PQIIKQLKKAMNVAKAEFDRESSVQKKINRMAEQAAAAMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNMARNGVVPLSVIPATSAARLVVVVPDHDSFVKMMVDGFVHYAGVVWTLQEVKDNDGKNVHLKDVTKE........NQEILVWPLILTCERV---..V--klq...........
U5WLB9_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
H9TEW9_9ALPC/3559-3754 ...SVASAYAALPSWIALEKARADLEEA...KKNDVS..PQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIISAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVVTPSLEVFSRIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAA........NELNLTWPLSITCERTT--..---klqn..........
A0A0K1YZY7_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIIQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
K4K1U5_9ALPC/3659-3853 ...SVASTFVNMPSFIAYENARQAYEDA...IANDSA..PQLVKQLKTAMNIAKSEFDREVSVQKKISRMAEQAAAQMYKEARAVNRKSKVIGAMHSLLMGMLRKLDMSNVDTILNLAKDGVVPLSIIPAACSTKLNVVSADLDSYYKICRDGCVHYAGVIWNVIDIRDNDGKIVHAKEIAPE........NVENIAWPIFLNCERI---..---vklq..........
T2B9U0_MERS/3929-4126 .at--LSEFSHLATFAELEAAQKAYQEA...MDSGDT.sPQVLKALQKAVNIAKNAYEKDKAVARKLERMADQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGIISNARNGCIPLSVIPLCASNKLRVVIPDFTVWNQVVTYPSLNYAGALWDITVINNVDNEIVKSSDVVD-........SNENLTWPLVLECTRASTS.aVKL..............
U5LR11_9BETC/3992-4189 stl---TEFSHLASYAELETAQKSYQEA...VASGDA.sPQMLKALQKAVNVAKNTYEKDKSIARKLERMAEQAMTSMYKQARAEDKKSKIVSAMQTMLFGMIKKLDNDVLNGIISNARNGCVPLSIIPLCASNKLRVVIPDMQIWKQVVTYPVLSYAGALWDITLINNVDGEVVRPSDVIDT........N-EGLTWPLLLECTRAVAS.aVK-l.............
A0A0U1UZC3_9ALPC/3534-3728 ...SVANTYVNLPSFVAYESARQNYEEA...VNNGSS..PQIIKQMRRAMHLAKAEYDREVSVQRKIERMAENAAAQMYKEARAENRKSKIISSMHALLFGMLRKLDMSSVDTILNLAKNGVVPLSIIPATSATRLCVVCPDHEAYAKIIFGQCLHYAGVVWNIVEVKDNDGKTVHQKEIVKA........NEETLSWPLSINCERV---..V--klq...........
A0A0U1WHG4_9ALPC/3621-3815 ...SVASTFVNMPSFIAYENARQAYEDA...INSGAA..QQLVKQLKRAMNIAKSEFDHEASVQKKISRMAEQAAAQMYKEARAVNRKSKVISAMHSLLFGMLRRLDMSSVDTILNLAKDGVVPLSIIPAASATKLNVVSADLESYLKICKEGCVHYAGVIWNVIDIRDNDGKLVHMKEVTQE........NVENLAWPLFLNCERI---..---vklq..........
A0A023YA54_MERS/4030-4227 atl---NEFSHLASFAELEAAQRSYQEA...LDSGDA.sPQVLKALQKAVNVAKNAYEKDKSVARKLERMAEQAMTSMYKQARAEDKKSKIVSAMQTMLFGMIKKLDNDVLNGIIANARNGCIPLSIVPLCASNKLRVVIPDFTVWNQVVTYPALNYAGALWDIASINNVDNEIIKSSDVSEN........N-EHLTWPLVLECTRAAAS.aVKL..............
R1A_SARS/3920-4116 ...AIASEFSSLPSYAAYATAQEAYEQA...VANGDS..EVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMD........NSPNLAWPLIVTALRANSA..VKL..............
#=GR R1A_SARS/3920-4116 SS ...XXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHH-SHHHHHHHHTSSSSEEEGGGSHHHHTSEEEEEESSHHHHHTTEESSEEEETTEEEEEEEEE-TTS-EE-GGG-SST........TGGGS-SSEEEEEEE--XX..XXX..............
I7AWB5_9BETC/4016-4211 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVN........S----TWPLVISANRHNEVstV--vl............
A0A0K2RW65_9BETC/3961-4156 ...ALQSEFVNMASFVEYEVAKKNLDEA...RSSGSA.nQQQLKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLAANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLNEISDD........C----NWPLVIIANRHNEV..---satvl.........
A0A0K2RVJ3_9BETC/3961-4156 ...ALQSEFVNMASFVEYEVAKKNLDEA...RSSGSA.nQQQLKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLAANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLNEISDD........C----NWPLVIIANRHNEV..---satvl.........
A8JNZ1_9ALPC/3605-3799 ...SVASAFANMPSFIAYEKARMNYEDA...IANDAA..PAVVKQLKKAMNTAKGEFDHEASVQKKIQRMADAAAAQMYKDARAVDRKSKVVSAMHSLLFGMLRKLDMSSINQLMELAKDGCIPMAIIPAAAATKLTVITPDLESFSKIRVDNNIYYAGAAWSITDVQDADGRVTILKEINAD........NKDALVWPLHVTCERV---..V--klq...........
B2BW32_9GAMC/3449-3641 ...AVTDEFCALPSYVDYEKARAAYEEI...QKNSTN..PQEIKAYKKAMNIAKSVLDRDIAVQKKLDAMAERAMSTMYKEAKSSEKKTRLVSSLHALLFSMIKRLDSDQVADVFEKARNGVVPLASVPITCSNKLTIVIPDMSLWEKVVVHDYVVYGNIVWDINEVVDMDGNQILPCRVSGE........A----SWPLEVRLVRNGKL..---vgd...........
B1PHI7_9ALPC/3868-4062 ...SVASTFVNMPSFMAYENARQSYEEA...INNGSS..PQLVKQLKRAMNIAKAELDHESSVQRKLNRMAEQAAAQMYKEARAVNKKSKVISSLHTLLFGMLRKLDMSSVDNILSLARDGVVPLSIIPAACATKLTIVVSDFESFKRIFQLGNVQYAGVVWSLIEVKDNDGKPVHVKEITAT........N-TALTWPLILNCERV---..V--klqn..........
R1A_BC133/3980-4177 atl---TEFSHLATYAELETAQSSYQKA...LNSGDA.sPQVLKALQKAVNVAKNAYEKDKAVARKLERMAEQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGVIANARNGCVPLSIVPLCASNKLRVVIPDISVWNKVVNWPSVSYAGSLWDVTVINNVDNEVVKPTDVVET........N-ESLTWPLVIECSRASSS.aVKL..............
A8JNZ0_9ALPC/3605-3799 ...SVASAFANMPSFIAYEKARMNYEDA...IANDAA..PAVVKQLKKAMNTAKGEFDHEASVQKKIQRMADAAAAQMYKDARAVDRKSKVVSAMHSLLFGMLRKLDMSSINQLMELAKDGCIPMAIIPAAAATKLTVITPDLESFSKIRVDNNIYYAGAAWSITDVQDADGRVTILKEINAD........NKDALVWPLHVTCERV---..V--klq...........
D9J202_9ALPC/3547-3742 ...SVASAYASLPSWVAYEQARDAYMEG...KKNDVA..PQVLKQLQKAMNIAKAEFDREASVQKKLDRMAEQAASNMFKEARAVDRKSKIIGAMHSLLFSMLKRLDMSSVNTLIDQARNGCLPLSIIPAASATRLVVVTPNIDVFSKVRLENNVHYAGAVWSIIEVRDSNSSIVHLKEVTQA........NEQNLCWPLTVTCERVS--..---klqn..........
B6VDX7_THCOV/3168-3337 ..a-VVDANINLDSYRIYKEADAIYKKS...VDMDEP..LQIQKKKLKAVNIAKAEWEREAASQRKLEKLADAAMKSMYLAERAEDRRIKLTSGLTAMLYHMLRRLDSDRVKALFECAKQQILPIHAIVGVSNDNLKVIFNDKDSYIQYVDGNTLFYKGQRYTIVK-----------------........-------------------..---klsldnapiegt..
R1AB_BCHK5/4020-4217 .at--LSEFSHLASYAELEAAQSSYQKA...LNSGDA.sPQVLKALQKAVNIAKNAYEKDKAVARKLERMAEQAMTSMYKQARAEDKKAKIVSAMQTMLFGMIKKLDNDVLNGVISNARNGCVPLSVVPLCASNKLRVVIPDITIWNKVVTWPSLSYAGALWDISLINNVDGEVVKSSDVTET........N-ESLTWPLVLECTRAASS..---avtl..........
I7B5F2_9BETC/4016-4211 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVN........S----TWPLVISANRHNEVstV--vl............
A0A1L2KGB5_9ALPC/3631-3825 ...SVASSFVSMPSYIAYENARQAYEDA...VANGSS..PQLVKQLKRAMNIAKSEFDHEISVQKKISRMAEXAATQMYKEARAVNRKSKVISAMHSLLFGMLRRLDMSSVETVLNLARDGVVPLSIIPATSASKLTIVSPDLESYSKIVCDGSVHYAGVVWTLNDVKDNDGRPVHVKEITKE........NVETLTWPLVLSCERV---..V--klq...........
H9BR34_9NIDO/3092-3261 ..a-VVDANIHMDSYRIFKEAEQAYKKS...VELNEP..IQEQKKKLKAVNIAKSEWERDAASQKKLEKLADAAMKSMYLAERAEDRRIKLTSGLTAMLYHMLRRIDSDKVKALFECAKQSILPIHAVVGVSSDALKVIFNDKESYMQYITGNILIYKGVSYNILKVTSLDN-----------........-------------------..---spiegi........
C6GHR8_9BETC/4007-4202 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVN........S----IWPLVIAANRHNEVstV--vl............
A0A125R5A4_9ALPC/3570-3765 ...SVASAYAALPSWIAYEKARADLEEA...KKNDVS..PQLLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNLEVLSKIRQENNVHYAGAIWSIVEVKDANGASVHLKEVTAT........NELNITWPLSLTCERTT--..---klqn..........
Q9J3E9_9BETC/4010-4205 ...ALQSEFVNMASFVEYELAKKNLDEA...KASGSA.nQQQIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDVN........S----TWPLVIAANRHNEVstV--vl............
A0A2H4MZ81_9NIDO/3276-3471 ..a-CASTFASMPEFIAYEQANKDLQDA...IQRGDS..EQVIKHLKKSVNRAKNDLDHAKSVAAKLERMAQEASVNMFKEARAIDRKTKAMSSLHHLLMSMLKKLNMSAIDNVLKLAQNNVVPLNIIPITTSSKLVVVVPDANIFKSLWDDGKIHYAGAVWTVSNILNADDQDVNFVDVRQN........S-DSMVWPLTLNCTRD---..---talqnn........
I1VWF3_CVH22/3634-3828 ...SVASSFVGMPSFVAYETARQEYENA...VANGSS..PQIIKQLKKAMNVAKAEFDRESSVQRKINRMAEQAAAAMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNMARNGVVPLSVIPATSASKLVVVVPDHDSFARMMVDGFVHYAGVVWTLQEVKDNDGKNVHLKDVTKE........NQETLVWPLILTCERV---..V--klq...........
R1A_CVH22/3630-3824 ...SVASSFVGMPSFVAYETARQEYENA...VANGSS..PQIIKQLKKAMNVAKAEFDRESSVQKKINRMAEQAAAAMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNMARNGVVPLSVIPATSAARLVVVVPDHDSFVKMMVDGFVHYAGVVWTLQEVKDNDGKNVHLKDVTKE........NQEILVWPLILTCERV---..V--klq...........
A0A4D6FWB1_9GAMC/3330-3540 ...AVVSEFSHIPSYTDYEKARAAYEEIqaqVKRGIVisPQEVAAYRKAANIAKATFDRDLAVQKKLDAMAERAMTSMYKEARVNDRKAKLVSSLHALLFSMLKKIDSDKLNTLFEQAQNGVVPLASVPIVCSNKLTLVIPDLDIWNKCVENDVVTYSGVVWNIDSIFDGDDNEVKPQFVRRDnitvpyydIKPDMAWPLKLSLVRNTHN.kIV-l.............
H9TEX0_9ALPC/3559-3754 ...SVASAYAALPSWIALEKARADLEEA...KKNDVS..PQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIISAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVVTPSLEVFSRIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAA........NELNLTWPLSITCERTT--..---klqn..........
A0A0U1UZA8_9ALPC/3811-4005 ...SVASTFVNMPSFIAYESARQSYEEA...INNGSS..PQLVKQLKRAMNIAKAELDHESSVQRKLNRMAEQAAAQMYKEARAVNKKSKVISSLHTLLFGMLRKLDMSSVDNILSLARDGVVPLSIIPAACATKLTIVVSDFESFKRIFQLGNVQYAGVVWSLTEVKDNDGKPVHIKEITAN........N-TALTWPLVLNCERI---..---vklqn.........
A3EXH3_BCHK9/3758-3956 ...AVASEFSNLSSYVDYENAQKAYDTA...VSTGAP..ESTVKALKKAMNVAKSVLDKDIATTRKLERMSELAMTAMYKQARAEDRRSKVTAAMQTMLFNMIRRLDSDALSNILNNARNGVVPLGVIPRTAANKLLLVVPDYSVFTATITMPTLTYAGSAWDVMQVADADGKTVNATDITRE........NSANLAWPLVVTAQRQL--..---atspvkl.......
B1PHK0_9ALPC/3775-3968 ...SVASTFVNMPSFIAYETARQNYEDA...TNNGSS..PQLVKQLKRAMNIAKAEFDHEAAVQRKIQRMAEQAASQMYKEARAVNRKSKVISSMHALLFGMLRKLDMSAIDTILNLARGGVVPLNIIPAACATKLVVVASDHESFTRVYQQGAVHYAGAVWTLSEVKDNDGKPVHVKEITKD........N-TALTWPLVLNCERV---..V--klq...........
R1AB_IBVB/3463-3671 ...SVTQEFSHIPSYAEYERAKNLYEKVlvdSKNGGV.tQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVIPDPETWVKCVEGVHVTYSTVVWNIDTVIDADGTELHPTSTGSGlt...yciSGANIAWPLKVNLTRNGHN.kV--dvvl..........
A3EXI9_BCHK9/3778-3976 ...AVASEFSNLSSYVDYENAQKAYDTA...VATGAP..ASTVKALKKAMNVAKSVLDKDVATTRKLERMSELAMTAMYKQARAEDRRSKVTAAMQTMLFNMIRRLDSDALSNILNNARNGVVPLGVIPRTAANKLLLVVPDFSVYTATITMPTLTYAGSAWDVMQVADADGKTVNATDITRE........NSVNLAWPLVVTAQRQQATspV--kl............
#=GC SS_cons ...SSCGCCTTSHHHHHHHHHHHHHHHH...HHCTXX..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTEEESSCCHHHCTSEEEEEESSHHHHHHHEETTEEEETTEEEEEEEEEETTSSBE-GGCSSTT........TGGGS-SSEEEEEEEESXX..XXX..............
#=GC seq_cons ...uVASpFsslPSalsYEpA+psY-cA...hssGsu...QllKpLcKAhNIAKS-aDR-sAVQRKL-RMA-pAhosMYK-ARusD+KoKVlSAMpohLFuMLRKLDssulNsIlspARsGsVPLulIPtssAsKLhVVlPDhpsasplsptsslpYAGslWsIpplpDuDGp.VplpElsts........N..sLsWPLhlsspRss.......hh............
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