#=GF ID   Complex1_LYR_1
#=GF AC   PF13232.12
#=GF DE   Complex1_LYR-like
#=GF PI   LYR-motif-like;
#=GF AU   Wood V;0000-0001-6330-7526
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   Manual
#=GF GA   21.00 21.00;
#=GF TC   21.00 21.00;
#=GF NC   20.90 20.90;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 90746521 -E 1000 --cpu 8 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0491
#=GF DR   INTERPRO; IPR008011;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This is a family of proteins carrying the LYR motif of family
#=GF CC   Complex1_LYR, Pfam:PF05347, likely to be involved in Fe-S
#=GF CC   cluster biogenesis in mitochondria.
#=GF SQ   23
#=GS Q386F8_TRYB2/54-150      AC Q386F8.1
#=GS A0A2K5I6R3_COLAP/9-37    AC A0A2K5I6R3.1
#=GS S9V833_9TRYP/11-107      AC S9V833.1
#=GS A0A168C7G0_CORDF/5-93    AC A0A168C7G0.1
#=GS SDHF1_MOUSE/9-50         AC Q3U276.1
#=GS A0A0M9FUK6_LEPPY/22-118  AC A0A0M9FUK6.1
#=GS A0A7G2CIF9_9TRYP/11-107  AC A0A7G2CIF9.1
#=GS W6KLQ2_9TRYP/12-108      AC W6KLQ2.1
#=GS Q4D3M3_TRYCC/9-105       AC Q4D3M3.1
#=GS A0A061J614_TRYRA/9-105   AC A0A061J614.1
#=GS Q4CTR1_TRYCC/9-105       AC Q4CTR1.1
#=GS W6KX71_9TRYP/12-108      AC W6KX71.1
#=GS A4HVQ8_LEIIN/25-121      AC A4HVQ8.1
#=GS C1E336_MICCC/13-117      AC C1E336.1
#=GS Q4CNU3_TRYCC/9-105       AC Q4CNU3.1
#=GS A0A061ITL2_TRYRA/1-30    AC A0A061ITL2.1
#=GS Q4QG24_LEIMA/25-121      AC Q4QG24.1
#=GS A0A2K5ZHL3_MANLE/9-55    AC A0A2K5ZHL3.1
#=GS A4H7B3_LEIBR/25-121      AC A4H7B3.1
#=GS A0A0S4JJ94_BODSA/27-123  AC A0A0S4JJ94.1
#=GS A0A507ECJ5_9FUNG/3-94    AC A0A507ECJ5.1
#=GS A0A422NFV7_9TRYP/9-105   AC A0A422NFV7.1
#=GS A0A507EDM5_9FUNG/3-93    AC A0A507EDM5.1
Q386F8_TRYB2/54-150                 ...d-EKLRLYRSLIKGA.SR.F....P..L.R.SRR.....DIV.TEEV.RSSFR.H..P..L..N..D..S..L.TNE..E...-...-.V....D.R....K.....L.V..L..G..W..ER..A..EAI...K..T.YAQ..NMYWFHS..RD.EVS....KEMMHHSLER.DRQRVREME......................................................
A0A2K5I6R3_COLAP/9-37               ....RQVLSLYRDLLRAG.RG.K....P..G.A.EAR.....X--.----.-----.-..-..-..-..-..-..-.---..-...-...-.-....-.-....-.....-.-..-..-..-..--..-..---...-..-.---..-------..--.---....----------.---------xxxxx.................................................
S9V833_9TRYP/11-107                 ...e-EKLRLYRRLLKGA.YK.F....P..L.R.SRR.....ELV.TEEV.RSTFR.D..P..L..N..E..T..L.TER..Q...-...-.V....D.Y....R.....L.L..L..G..K..EK..A..AAI...E..T.YAE..NMYWFHS..RD.EVT....REMMHHSIQR.DQERIQEM-a.....................................................
A0A168C7G0_CORDF/5-93               ....QEVLHAYRHLYKGLlRG.V....Q..Y.AiPAR.....YIV.RDQI.RGAFR.-..-..N..T..T..S..T.TTA..A...-...A.A....A.-....-.....-.A..A..T..W..DA..E..AIK...R..-.---..-TLWFLS..AA.GRQ....RGLEHRILR-.---------nlvrmhser.............................................
SDHF1_MOUSE/9-50                    ....RQVLSLYRELLRAG.RG.T....P..G.A.EAR.....---.---V.RAEFR.-..-..-..-..-..-..-.QHA..S...L...P.R....T.D....V.....L.-..-..-..-..--..-..---...-..-.---..-------..--.---....----------.---------ri....................................................
A0A0M9FUK6_LEPPY/22-118             ....QEKLRLYRTLLKGA.YG.F....P..M.R.SRR.....EVV.TEEV.MSTFR.D..P..N..N..E..Q..L.SER..D...-...-.I....D.Y....R.....L.V..L..G..W..ER..A..KSI...Q..T.YAE..NMHWFHS..RD.EVT....KEMLYFSEER.DRKRAEQMR......................................................
A0A7G2CIF9_9TRYP/11-107             ...g-EKISLYRQLLKGA.NK.F....P..L.K.SRR.....DLI.TEEI.RSTFR.D..P..K..N..E..I..L.TEK..Q...-...-.V....D.Y....R.....L.L..L..G..K..EK..A..LSI...N..T.YAE..NMYWFHS..RD.EVN....KEMIHFSIER.DKKKIKEME......................................................
W6KLQ2_9TRYP/12-108                 ....QEKLRLYRSLIKGA.HR.F....P..L.R.SRR.....ELV.LEEV.RCTFR.D..P..H..H..L..H..L.TQR..E...-...-.V....D.Y....R.....L.L..L..G..W..ER..V..AAI...S..T.YAQ..NMHWFHS..RD.EVT....REMLLFSEAR.DRERAE---ets...................................................
Q4D3M3_TRYCC/9-105                  ....QEKLRLYRALLKGA.NR.F....P..L.R.SRR.....EIV.AEEV.RGAFR.H..P..L..N..D..S..L.TTK..E...-...-.V....D.Y....K.....L.L..L..G..W..ER..A..AAI...Q..T.YAE..NMYWFHS..RD.EVS....REMMHHSLER.DRQRIREME......................................................
A0A061J614_TRYRA/9-105              ....QEKLRLYRALLKGA.SR.F....P..L.R.SRR.....DIV.TEEV.QGAFR.H..P..L..N..D..S..L.TTE..E...-...-.V....D.Y....K.....L.L..L..G..W..ER..A..AAI...Q..T.YAQ..NMYWFHS..RD.EVS....KEMMHHSLER.DRQRIREME......................................................
Q4CTR1_TRYCC/9-105                  ....QEKLRLYRALLKGA.NR.F....P..L.R.SRR.....EIV.TEEV.RGAFR.H..P..L..N..D..S..L.TTK..E...-...-.V....D.Y....K.....L.L..L..G..W..ER..A..AAI...Q..T.YAE..NMYWFHS..RD.EVS....REMMHHSLER.DRQRIREME......................................................
W6KX71_9TRYP/12-108                 ....QEHLRLYRALIKSA.SR.F....P..L.R.SRR.....ELV.LAEV.RGTFR.D..P..P..H..P..P..L.TPK..E...-...-.V....D.Y....R.....L.L..L..G..W..ER..V..AAI...T..T.YAQ..NMHWFHS..RD.EVT....REMMLFSESR.DRQRAE---eta...................................................
A4HVQ8_LEIIN/25-121                 ....QEKIRLYRSLLKGA.HG.F....P..M.R.SRR.....DVI.TEEV.RSTFR.D..P..N..N..E..M..L.SEK..D...-...-.I....D.Y....R.....L.I..L..G..W..ER..A..KSI...K..T.YAE..NMHWFHS..RD.EVT....KEMMYFSEER.DRKKAAEMR......................................................
C1E336_MICCC/13-117                 vasa-----VYRRLLRQA.AL.L....P..R.Q.RVR.....GIV.REEV.RREFA.A..P..P..S..E..C..Q.ATR..A..rA...M.A....R.S....M.....L.A..L..T..W..LR..R..ASA...DprS.TEG..ELLWTLVgqYD.SLNr..rRKMEDRHPQR.RKRRLEK--lg....................................................
Q4CNU3_TRYCC/9-105                  ....QEKLRLYRALLRGA.NR.F....P..L.R.SRR.....EIV.REEV.RGAFR.H..P..L..N..D..S..L.TTK..E...-...-.V....D.Y....K.....L.L..L..G..W..ER..A..AAI...Q..T.YAE..NMYWFHS..RD.EVS....REMMHHSLER.DRQRIREME......................................................
A0A061ITL2_TRYRA/1-30               ....--------------.--.-....-..-.-.---.....---.----.-----.-..-..-..-..-..-..-.---..-...-...-.-....-.-....-.....-.-..-..-..-..--..-..---...-..-.---..-MYWFHS..RD.EVS....KEMMHHSLER.DRQRIREME......................................................
Q4QG24_LEIMA/25-121                 ....REKIRLYRSLLKGA.HS.F....P..M.R.SRR.....DVI.TEEV.RSTFR.D..P..N..N..E..I..L.SEK..D...-...-.I....D.Y....R.....L.V..L..G..W..ER..A..KSI...K..T.YAE..NMHWFHS..RD.EVT....KEMMYFSEER.DRKKAAEMR......................................................
A0A2K5ZHL3_MANLE/9-55               ....RQVLSLYRDLLRAG.RG.K....P..G.A.ENR.....--L.SPGV.RGH--.-..-..-..-..-..-..-.---..-...-...-.-....-.-....-.....-.-..-..-..-..--..-..---...-..-.---..-------..--.---....----------.---------pgqhsetpslsghata......................................
A4H7B3_LEIBR/25-121                 ....QEKIRLYRSLLKGA.HG.F....P..L.R.SRR.....DVI.TEEV.RCTFR.D..P..N..N..E..Q..L.SEK..D...-...-.I....D.Y....R.....L.I..L..G..W..ER..A..KSI...K..T.YAQ..NMHWFHS..RD.EVT....KEMMYFSEER.DRKKMAEMR......................................................
A0A0S4JJ94_BODSA/27-123             ...a-EKIRLYRALLKGA.HR.F....P..L.K.SRR.....DVV.SEEV.KGAFR.N..P..L..N..E..T..L.TVD..E...-...-.V....D.Y....K.....L.V..L..G..W..ER..S..AAV...Q..T.FAQ..NMYWFHS..RD.EVT....KEMLHHSVQR.DAARA----aevt..................................................
A0A507ECJ5_9FUNG/3-94               ...i-EAISIYRQLLRTQ.RQ.L....P..P.Q.SGR....aQRL.SEHV.RSEIR.T..L..F..R..D..A..G.ASK..D...L...E.H....A.R....K.....E.A..L..-..-..--..-..---...-..-.---..-------..--.---....----------.---------alsqlvnnemlqryalrkdstmlaflpprsayqlld..................
A0A422NFV7_9TRYP/9-105              ....QEKLRLYRALLKGA.NR.F....P..L.R.SRR.....DIV.TEEV.RGAFR.N..S..L..N..D..S..L.TMK..E...-...-.M....D.Y....K.....L.L..L..G..W..ER..A..AAI...Q..T.YAQ..NMYWFHS..RD.EVS....KEMLHHSLER.DRQRIREME......................................................
A0A507EDM5_9FUNG/3-93               ...i-EAISIYRQLLRTQ.RQ.L....P..P.Q.SGR....aQRL.SEHV.RNEIR.T..L..F..R..D..A..G.ASK..D...L...E.H....A.R....K.....E.A..L..-..-..--..-..---...-..-.---..-------..--.---....----------.---------alsqlvnnemlqkyalrkdstmlaflpprsayqll...................
#=GC seq_cons                       ....pEKLRLYRsLLKGA.pp.F....P..h.+.SRR.....-ll.oEEV.RusFR.p..P.....s..-..t..L.op+..-.........l....D.Y....+.....L.l..L..G..W..ER..s..tuI...p..T.YAp..NMaWFHS..RD.EVo....+EMhaaS.pR.D+p+htp........................................................
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