#=GF ID DEAD
#=GF AC PF00270.33
#=GF DE DEAD/DEAH box helicase
#=GF AU Bateman A;0000-0002-6982-4660
#=GF AU Bruskiewich R;0000-0002-4447-5978
#=GF AU Sonnhammer ELL;0000-0002-9015-5588
#=GF SE Published_alignment
#=GF GA 26.00 24.10;
#=GF TC 26.00 24.10;
#=GF NC 25.90 24.00;
#=GF BM hmmbuild --handHMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF WK DEAD_box
#=GF CL CL0023
#=GF NE PF00622;
#=GF NL Q91VR5.1/130-246
#=GF RN [1]
#=GF RM 10322435
#=GF RT Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
#=GF RT related families.
#=GF RA de la Cruz J, Kressler D, Linder P;
#=GF RL Trends Biochem Sci 1999;24:192-198.
#=GF RN [2]
#=GF RM 9862990
#=GF RT The DEAD box RNA helicase family in Arabidopsis thaliana.
#=GF RA Aubourg S, Kreis M, Lecharny A;
#=GF RL Nucleic Acids Res 1999;27:628-636.
#=GF DR INTERPRO; IPR011545;
#=GF DR PROSITE; PDOC00039;
#=GF DR SCOP; 1qva; fa;
#=GF DR HOMSTRAD; DEAD;
#=GF DR HOMSTRAD; helicase_NC;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Members of this family include the DEAD and DEAH box helicases.
#=GF CC Helicases are involved in unwinding nucleic acids. The DEAD box
#=GF CC helicases are involved in various aspects of RNA metabolism,
#=GF CC including nuclear transcription, pre mRNA splicing, ribosome
#=GF CC biogenesis, nucleocytoplasmic transport, translation, RNA decay
#=GF CC and organellar gene expression.
#=GF SQ 246217
#=GS A0A5E4SXG1_9BURK/53-227 AC A0A5E4SXG1.1
#=GS A0A0T6LT45_STRVM/1224-1402 AC A0A0T6LT45.1
#=GS A0A1E8FPW9_9MICC/40-193 AC A0A1E8FPW9.1
#=GS A0A0C2JWC6_THEKT/94-276 AC A0A0C2JWC6.1
#=GS A0A197JZH8_9FUNG/112-279 AC A0A197JZH8.1
#=GS A0A7K5TQU0_CEPOR/248-410 AC A0A7K5TQU0.1
#=GS A0A1R3K2W5_9ROSI/166-346 AC A0A1R3K2W5.1
#=GS A0A1S3NJV7_SALSA/481-660 AC A0A1S3NJV7.1
#=GS A0A835ES78_9POAL/194-338 AC A0A835ES78.1
#=GS A0A807ZJC9_9DELT/256-427 AC A0A807ZJC9.1
#=GS A0A344U803_9ACTN/86-255 AC A0A344U803.1
#=GS A0A7K5IXX0_TOXRE/97-265 AC A0A7K5IXX0.1
#=GS N1R9D3_FUSC4/23-200 AC N1R9D3.1
#=GS C3XA83_OXAFO/607-771 AC C3XA83.1
#=GS A0A1G4IU39_9SACH/259-420 AC A0A1G4IU39.1
#=GS A0A093R8X7_PYGAD/19-190 AC A0A093R8X7.1
#=GS S7PPJ0_MYOBR/169-340 AC S7PPJ0.1
#=GS A0A0D2K9C6_9EURO/47-221 AC A0A0D2K9C6.1
#=GS A0A061B7N6_CYBFA/64-235 AC A0A061B7N6.1
#=GS A0A2H3H683_FUSOX/686-852 AC A0A2H3H683.1
#=GS A0A067QIM3_9AGAM/472-657 AC A0A067QIM3.1
#=GS A0A844LTJ5_9BACI/625-789 AC A0A844LTJ5.1
#=GS I2H0I3_TETBL/31-213 AC I2H0I3.1
#=GS A0A166EW08_9AGAM/194-381 AC A0A166EW08.1
#=GS A0A485NGI2_LYNPA/133-293 AC A0A485NGI2.1
#=GS A0A8C5ZJY3_MARMA/152-340 AC A0A8C5ZJY3.1
#=GS A0A671S667_9TELE/96-275 AC A0A671S667.1
#=GS A0A8C4CWI6_9TELE/133-312 AC A0A8C4CWI6.1
#=GS A0A2U1LCU7_ARTAN/123-294 AC A0A2U1LCU7.1
#=GS A0A142HAN9_9BACT/33-202 AC A0A142HAN9.1
#=GS A0A6J3CGI5_GALME/37-209 AC A0A6J3CGI5.1
#=GS R7SI19_DICSQ/10-96 AC R7SI19.1
#=GS A0A423VQC6_9PEZI/431-600 AC A0A423VQC6.1
#=GS A0A670KDZ0_PODMU/75-247 AC A0A670KDZ0.1
#=GS A0A8B8ZXB6_PHODC/298-476 AC A0A8B8ZXB6.1
#=GS A0A7R9MDM4_9ACAR/165-345 AC A0A7R9MDM4.1
#=GS A0A4R3YUK8_9GAMM/28-122 AC A0A4R3YUK8.1
#=GS A0A8D2CPE6_SCIVU/141-292 AC A0A8D2CPE6.1
#=GS A0A0W1AGU8_9GAMM/30-197 AC A0A0W1AGU8.1
#=GS A0A0B5B838_9DELT/25-192 AC A0A0B5B838.1
#=GS A0A2Y9M501_DELLE/246-417 AC A0A2Y9M501.1
#=GS A0A4Q4C0E9_9MICO/23-102 AC A0A4Q4C0E9.1
#=GS A0A8H4QSN4_9AGAR/216-432 AC A0A8H4QSN4.1
#=GS A0A544ZRG1_9PEZI/60-179 AC A0A544ZRG1.1
#=GS A0A8C4QI58_EPTBU/33-207 AC A0A8C4QI58.1
#=GS R1FDM8_EMIHU/153-323 AC R1FDM8.1
#=GS A0A2D2ATN0_9CAUL/23-195 AC A0A2D2ATN0.1
#=GS A0A8R1W0Z7_ACYPI/29-203 AC A0A8R1W0Z7.1
#=GS A0A0U5C5Z9_ASPCI/645-716 AC A0A0U5C5Z9.1
#=GS A0A0D8HGF2_9ACTN/29-202 AC A0A0D8HGF2.1
#=GS A0A8H8DQ80_9ASCO/1343-1512 AC A0A8H8DQ80.1
#=GS A0A673G6F7_9TELE/47-214 AC A0A673G6F7.1
#=GS A0A3S3TEX4_9SPHI/26-194 AC A0A3S3TEX4.1
#=GS A0A8C9ZZ36_SANLU/275-446 AC A0A8C9ZZ36.1
#=GS A0A0T5P0Y8_9RHOB/26-197 AC A0A0T5P0Y8.1
#=GS V2RMC4_9BACT/125-300 AC V2RMC4.1
#=GS A0A8H4JQ65_9HYPO/189-358 AC A0A8H4JQ65.1
#=GS A0A453AZY5_AEGTS/2-127 AC A0A453AZY5.1
#=GS A0A8B9PYX5_APTOW/1-152 AC A0A8B9PYX5.1
#=GS A0A8C7G752_ONCKI/479-659 AC A0A8C7G752.1
#=GS M1NWX1_9CORY/654-818 AC M1NWX1.1
#=GS A0A8C4D9B1_9TELE/155-332 AC A0A8C4D9B1.1
#=GS A0A5J9US33_9POAL/90-241 AC A0A5J9US33.1
#=GS A0A1X7QWH1_9SACH/76-238 AC A0A1X7QWH1.1
#=GS A0A314ZD31_PRUYE/10-149 AC A0A314ZD31.1
#=GS A0A7I4CB37_PHYPA/59-218 AC A0A7I4CB37.1
#=GS A0A8U0MJV6_MUSPF/288-467 AC A0A8U0MJV6.1
#=GS A0A2G3B2I2_CAPCH/1-50 AC A0A2G3B2I2.1
#=GS A0A8C4UKH8_FALTI/400-545 AC A0A8C4UKH8.1
#=GS A0A8J3QU43_9ACTN/38-209 AC A0A8J3QU43.1
#=GS W6YJA0_COCCA/312-432 AC W6YJA0.1
#=GS A0A5E4ETJ7_PRUDU/41-215 AC A0A5E4ETJ7.1
#=GS A0A507EH45_9FUNG/48-214 AC A0A507EH45.1
#=GS M1VEY7_CYAM1/880-1065 AC M1VEY7.1
#=GS G2DWA1_9GAMM/630-794 AC G2DWA1.1
#=GS C7PZF8_CATAD/88-257 AC C7PZF8.1
#=GS A0A4W2E5A2_BOBOX/45-213 AC A0A4W2E5A2.1
#=GS A0A8B9VVR4_9AVES/67-140 AC A0A8B9VVR4.1
#=GS A0A1R4G7Z4_9MICO/237-411 AC A0A1R4G7Z4.1
#=GS A0A4R6ABP2_9RHOB/26-197 AC A0A4R6ABP2.1
#=GS A0A8H7Z977_AJECA/99-261 AC A0A8H7Z977.1
#=GS A0A3Q1D6U4_AMPOC/6-60 AC A0A3Q1D6U4.1
#=GS A0A5N6SB30_ASPPS/148-319 AC A0A5N6SB30.1
#=GS A0A432VUQ2_9GAMM/33-207 AC A0A432VUQ2.1
#=GS A0A3P8ZI35_ESOLU/120-271 AC A0A3P8ZI35.2
#=GS A0A672QEX4_SINGR/100-271 AC A0A672QEX4.1
#=GS A0A421J969_9ASCO/252-439 AC A0A421J969.1
#=GS A0A0N1BQY3_9SPHN/258-426 AC A0A0N1BQY3.1
#=GS G0QM33_ICHMG/33-212 AC G0QM33.1
#=GS F4S3D7_MELLP/104-255 AC F4S3D7.1
#=GS A0A4Z1L4J3_9HELO/49-216 AC A0A4Z1L4J3.1
#=GS A0A0K9GTU4_9BACI/362-499 AC A0A0K9GTU4.1
#=GS A0A8C5VRF4_MICMU/293-472 AC A0A8C5VRF4.1
#=GS A0A672P4U6_SINGR/169-367 AC A0A672P4U6.1
#=GS A0A8C6PPJ4_NOTFU/23-193 AC A0A8C6PPJ4.1
#=GS A0A0R0CN78_9GAMM/29-141 AC A0A0R0CN78.1
#=GS A0A0R0HL42_SOYBN/39-213 AC A0A0R0HL42.1
#=GS A0A7M4DVZ3_CROPO/1337-1508 AC A0A7M4DVZ3.1
#=GS A0A8C2ZEH8_CYCLU/373-574 AC A0A8C2ZEH8.1
#=GS A0A668AH36_9TELE/308-482 AC A0A668AH36.1
#=GS A0A0A0JD68_9MICO/100-270 AC A0A0A0JD68.1
#=GS A0A1M7L0X5_9FIRM/17-183 AC A0A1M7L0X5.1
#=GS F6VUX5_MONDO/132-283 AC F6VUX5.2
#=GS A0A6P6TQA8_COFAR/81-247 AC A0A6P6TQA8.1
#=GS A0A7K9B5X6_DRONO/54-222 AC A0A7K9B5X6.1
#=GS A0A850T8H0_GRUAM/52-271 AC A0A850T8H0.1
#=GS A0A7M2TG13_STRCW/38-220 AC A0A7M2TG13.1
#=GS V2XYE6_MONRO/432-606 AC V2XYE6.1
#=GS A0A1W1VF40_9BACT/22-185 AC A0A1W1VF40.1
#=GS A0A286XYX7_CAVPO/30-202 AC A0A286XYX7.1
#=GS E6STQ0_BACT6/25-197 AC E6STQ0.1
#=GS A0A663F6A9_AQUCH/277-448 AC A0A663F6A9.1
#=GS A0A3P8SFL1_AMPPE/237-389 AC A0A3P8SFL1.1
#=GS H2K7A6_STRHJ/101-270 AC H2K7A6.1
#=GS A0A6J1S0E5_FRAOC/871-1042 AC A0A6J1S0E5.1
#=GS A0A835E6B2_9POAL/129-302 AC A0A835E6B2.1
#=GS A0A183EJU3_9BILA/20-157 AC A0A183EJU3.1
#=GS A0A067BXQ3_SAPPC/178-354 AC A0A067BXQ3.1
#=GS A0A438AIX9_9RHOB/25-196 AC A0A438AIX9.1
#=GS A0A1A8YRK7_9APIC/272-505 AC A0A1A8YRK7.1
#=GS A0A4W4FZ10_ELEEL/538-698 AC A0A4W4FZ10.1
#=GS A0A5N5SJ36_9CRUS/256-439 AC A0A5N5SJ36.1
#=GS A0A8B6H9D8_MYTGA/24-196 AC A0A8B6H9D8.1
#=GS A0A4R5CIU3_9FLAO/23-186 AC A0A4R5CIU3.1
#=GS A0A673D0Q4_9TELE/96-265 AC A0A673D0Q4.1
#=GS A0A2U1Q7J3_ARTAN/247-408 AC A0A2U1Q7J3.1
#=GS A0A504Y687_FASGI/7-178 AC A0A504Y687.1
#=GS A0A560WA35_9MICO/47-235 AC A0A560WA35.1
#=GS A0A672F6H8_SALFA/261-512 AC A0A672F6H8.1
#=GS A0A6J3EKD5_AYTFU/133-293 AC A0A6J3EKD5.1
#=GS A0A6I9TUP3_SESIN/224-396 AC A0A6I9TUP3.1
#=GS E1SI84_PANVC/199-366 AC E1SI84.1
#=GS A0A7K4R7M2_9TYRA/77-248 AC A0A7K4R7M2.1
#=GS A0A670IZL7_PODMU/533-691 AC A0A670IZL7.1
#=GS A0A4S2MZF4_9PEZI/162-339 AC A0A4S2MZF4.1
#=GS A0A7K9QF75_IRECY/283-468 AC A0A7K9QF75.1
#=GS A0A7J6SR40_PEROL/121-188 AC A0A7J6SR40.1
#=GS A0A835AG01_9POAL/216-355 AC A0A835AG01.1
#=GS A0A671QM63_9TELE/232-400 AC A0A671QM63.1
#=GS A0A3M6VMR8_9STRA/152-323 AC A0A3M6VMR8.1
#=GS A0A5S6PCC3_BRUMA/299-473 AC A0A5S6PCC3.1
#=GS A0A8C8F887_ONCTS/325-499 AC A0A8C8F887.1
#=GS A0A5C6QZZ1_9GAMM/23-188 AC A0A5C6QZZ1.1
#=GS A0A1Y4D1B8_9BACT/18-183 AC A0A1Y4D1B8.1
#=GS A0A399R846_9PROT/26-197 AC A0A399R846.1
#=GS A0A3Q0GIP7_ALLSI/83-258 AC A0A3Q0GIP7.1
#=GS A0A1S7H836_9SACH/411-583 AC A0A1S7H836.1
#=GS A0A239D4J1_9BACT/307-474 AC A0A239D4J1.1
#=GS A0A7X0HN05_9BACI/258-421 AC A0A7X0HN05.1
#=GS A0A5C3DZQ0_9BASI/973-1132 AC A0A5C3DZQ0.1
#=GS A0A401H4E1_9APHY/496-676 AC A0A401H4E1.1
#=GS A0A1C4PQ67_9ACTN/41-219 AC A0A1C4PQ67.1
#=GS A0A6P8HY08_ACTTE/61-220 AC A0A6P8HY08.1
#=GS A0A1E7RFA9_9GAMM/27-203 AC A0A1E7RFA9.1
#=GS A0A2T4JHX7_9RHOB/201-367 AC A0A2T4JHX7.1
#=GS A0A498P0B8_LABRO/813-930 AC A0A498P0B8.1
#=GS A0A6L7H4S7_BACAN/29-196 AC A0A6L7H4S7.1
#=GS W2QIU4_PHYPN/437-610 AC W2QIU4.1
#=GS A0A556MHC0_9SPHI/15-178 AC A0A556MHC0.1
#=GS M7T5U9_EUTLA/71-237 AC M7T5U9.1
#=GS A0A4P8YHT7_9ENTR/199-366 AC A0A4P8YHT7.1
#=GS A0A3D8M9S8_9ALTE/8-168 AC A0A3D8M9S8.1
#=GS A0A060S2E7_PYCCI/78-268 AC A0A060S2E7.1
#=GS A0A2N6ULW3_9ACTO/39-189 AC A0A2N6ULW3.1
#=GS A0A540LUE7_MALBA/52-224 AC A0A540LUE7.1
#=GS A0A6L2PXR9_COPFO/58-224 AC A0A6L2PXR9.1
#=GS A0A565BF36_9BRAS/119-290 AC A0A565BF36.1
#=GS A0A085EIU6_9FLAO/26-194 AC A0A085EIU6.1
#=GS A0A174BHF0_9BACE/270-435 AC A0A174BHF0.1
#=GS A0A0A1TGW1_9HYPO/296-447 AC A0A0A1TGW1.1
#=GS A0A093Z9A9_9PEZI/384-543 AC A0A093Z9A9.1
#=GS A0A6B2JFK2_9RHOB/18-190 AC A0A6B2JFK2.1
#=GS A6NQ58_9FIRM/619-783 AC A6NQ58.1
#=GS A0A5C6PRL7_9TELE/517-675 AC A0A5C6PRL7.1
#=GS A0A0B1SSV2_OESDE/1-92 AC A0A0B1SSV2.1
#=GS A0A397GBR2_9GLOM/1-157 AC A0A397GBR2.1
#=GS A0A0D2J0P9_9EURO/1392-1564 AC A0A0D2J0P9.1
#=GS A0A668U9U6_OREAU/87-254 AC A0A668U9U6.1
#=GS A0A2R4C489_9BURK/95-263 AC A0A2R4C489.1
#=GS A0A026WVB9_OOCBI/391-565 AC A0A026WVB9.1
#=GS A0A2K9EM63_9FIRM/281-453 AC A0A2K9EM63.1
#=GS A0A8B8QLZ7_9MYRT/316-495 AC A0A8B8QLZ7.1
#=GS A0A076NRL7_9CORY/19-172 AC A0A076NRL7.1
#=GS A0A4U0WET9_9PEZI/82-252 AC A0A4U0WET9.1
#=GS A0A812E7D2_SEPPH/335-506 AC A0A812E7D2.1
#=GS A0A419HGF4_9PSEU/9-167 AC A0A419HGF4.1
#=GS H8ML64_CORCM/2-91 AC H8ML64.1
#=GS A0A091U140_PHORB/103-274 AC A0A091U140.1
#=GS A0A8D0FWK4_STROC/57-228 AC A0A8D0FWK4.1
#=GS DBP2_EMENI/164-335 AC Q5B0J9.1
#=GS A0A8C6QKH3_NANGA/31-203 AC A0A8C6QKH3.1
#=GS A0A814Q4M1_ADIRI/408-581 AC A0A814Q4M1.1
#=GS A0A2N9JLL0_9ACTN/650-814 AC A0A2N9JLL0.1
#=GS A0A0R0MEH8_9BURK/60-277 AC A0A0R0MEH8.1
#=GS A0A1V1PL49_9PROT/260-431 AC A0A1V1PL49.1
#=GS A0A7L2FL00_QUIME/61-228 AC A0A7L2FL00.1
#=GS G8ZLM1_TORDC/387-559 AC G8ZLM1.1
#=GS A0A072TNW6_MEDTR/41-208 AC A0A072TNW6.1
#=GS Q0KBQ4_CUPNH/62-144 AC Q0KBQ4.1
#=GS A0A1V6NZJ1_PENDC/479-640 AC A0A1V6NZJ1.1
#=GS A0A6M0LAT3_9LACT/243-408 AC A0A6M0LAT3.1
#=GS A0A834XRE0_9HYME/217-385 AC A0A834XRE0.1
#=GS W7JZ67_PLAFA/1235-1411 AC W7JZ67.1
#=GS A0A0E0JEP0_ORYPU/252-422 AC A0A0E0JEP0.1
#=GS A0A4S4MRQ3_9APHY/149-292 AC A0A4S4MRQ3.1
#=GS A0A5J5DWN3_9BIFI/315-503 AC A0A5J5DWN3.1
#=GS A0A494WWK5_9FIRM/630-794 AC A0A494WWK5.1
#=GS A0A6I8N3N1_ORNAN/26-82 AC A0A6I8N3N1.1
#=GS R4X7Q3_TAPDE/66-236 AC R4X7Q3.1
#=GS A0A1B1U715_9HELI/37-202 AC A0A1B1U715.1
#=GS A0A3Q3W1T6_MOLML/26-209 AC A0A3Q3W1T6.1
#=GS A0A1S3TPS8_VIGRR/1289-1460 AC A0A1S3TPS8.1
#=GS A0A6J1DKU9_MOMCH/38-209 AC A0A6J1DKU9.1
#=GS A0A3Q7Q9B4_CALUR/299-466 AC A0A3Q7Q9B4.1
#=GS A0A7G2CT99_9TRYP/83-263 AC A0A7G2CT99.1
#=GS A0A226P885_COLVI/120-279 AC A0A226P885.1
#=GS A0A5B6V574_9ROSI/41-216 AC A0A5B6V574.1
#=GS A0A7K6PT83_9CORV/300-468 AC A0A7K6PT83.1
#=GS A0A8C6UYP1_9GOBI/49-224 AC A0A8C6UYP1.1
#=GS A0A4W5P4L2_9TELE/19-191 AC A0A4W5P4L2.1
#=GS W4G710_APHAT/410-569 AC W4G710.1
#=GS A0A813CV23_9DINO/1238-1347 AC A0A813CV23.1
#=GS A0A8K0JXF7_LADFU/458-560 AC A0A8K0JXF7.1
#=GS A0A673H7T1_9TELE/54-217 AC A0A673H7T1.1
#=GS A0A1Z5H8M7_9GAMM/232-399 AC A0A1Z5H8M7.1
#=GS A0A0D5NEH8_9BACL/27-193 AC A0A0D5NEH8.1
#=GS A0A368YK81_9RHOB/237-434 AC A0A368YK81.1
#=GS A0A1D9P6C3_9FLAO/20-184 AC A0A1D9P6C3.1
#=GS A0A7L3WPK1_9GRUI/49-220 AC A0A7L3WPK1.1
#=GS I1IC04_BRADI/5-178 AC I1IC04.1
#=GS A0A6M0QRU6_9RHOB/23-195 AC A0A6M0QRU6.1
#=GS A0A7L6N322_9BACT/21-188 AC A0A7L6N322.1
#=GS K4LEU1_THEPS/91-300 AC K4LEU1.1
#=GS S9WAB8_CAMFR/181-344 AC S9WAB8.1
#=GS A0A2K6EE98_PROCO/31-203 AC A0A2K6EE98.1
#=GS A0A506UR04_9PROT/52-221 AC A0A506UR04.1
#=GS A0A2Z7AE50_9LAMI/196-374 AC A0A2Z7AE50.1
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