GenomeNet

Database: Pfam
Entry: DUF1970
LinkDB: DUF1970
Original site: DUF1970 
#=GF ID   DUF1970
#=GF AC   PF09301.15
#=GF DE   Domain of unknown function (DUF1970)
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Sammut SJ;0000-0003-4472-904X
#=GF SE   pdb_1w8x
#=GF GA   25.00 25.00;
#=GF TC   25.00 247.00;
#=GF NC   23.40 23.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 81514348 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Members of this family consist of various uncharacterised viral
#=GF CC   hypothetical proteins.
#=GF SQ   3
#=GS VP16_BPPRD/2-113    AC P27392.1
#=GS VP16_BPPRD/2-113    DR PDB; 1W8X P; 2-113;
#=GS Q3T4T4_9VIRU/2-113  AC Q3T4T4.1
#=GS Q3T4Z6_9VIRU/2-113  AC Q3T4Z6.1
VP16_BPPRD/2-113               DKKKLLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPYMTYNQPQAGSVTLPVAGYTSPSPTLPNRNRSCGCNPAVSAAMAQGADLASKLTDSITSQLNDYASSLNDYLAS
#=GR VP16_BPPRD/2-113    SS    ---SSHHHHHHHHHHHHHHHHHHHTT-S-SS-TT----TT-SS---S-S---S------------------------------------------TTTTHHHHHHHHHHHHH
Q3T4T4_9VIRU/2-113             DKKKLLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPYMTYNQPQAGSVTLPVAGYTSPSLTLPNRNRSCGCNPAVSAAMAQGADLASKLTDSITSQLNDYASSLNDYLAS
Q3T4Z6_9VIRU/2-113             DKKKLLYWVSGGLVLILIWLWFRNRPAAQVASNWEGPPYMTYNQPQAGSVTLPVAGYTSPSLTLPNRNRSCGCNPAVSAAMAQGADLASKLTESISSQLNNYAESLNDYLAS
#=GC SS_cons                   ---SSHHHHHHHHHHHHHHHHHHHTT-S-SS-TT----TT-SS---S-S---S------------------------------------------TTTTHHHHHHHHHHHHH
#=GC seq_cons                  DKKKLLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPYMTYNQPQAGSVTLPVAGYTSPSLTLPNRNRSCGCNPAVSAAMAQGADLASKLTDSITSQLNDYASSLNDYLAS
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