GenomeNet

Database: Pfam
Entry: DUF2606
LinkDB: DUF2606
Original site: DUF2606 
#=GF ID   DUF2606
#=GF AC   PF10794.12
#=GF DE   Protein of unknown function (DUF2606)
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   PRODOM
#=GF GA   25.40 25.40;
#=GF TC   25.70 26.10;
#=GF NC   25.20 25.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF CL   CL0287
#=GF RN   [1]
#=GF RM   16220534
#=GF RT   Proteomics-based consensus prediction of protein retention in a
#=GF RT   bacterial membrane.
#=GF RA   Tjalsma H, van Dijl JM;
#=GF RL   Proteomics. 2005;5:4472-4482.
#=GF DR   INTERPRO; IPR019730;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Family of bacterial proteins with unknown function. These
#=GF CC   proteins have been classified as membrane proteins
#=GF SQ   10
#=GS A0A366HYB6_9FIRM/17-137  AC A0A366HYB6.1
#=GS A0A0A1MM71_9BACI/2-116   AC A0A0A1MM71.1
#=GS YBFJ_BACSU/1-130         AC O31451.1
#=GS A0A2I7SS90_LACSH/8-132   AC A0A2I7SS90.1
#=GS A0A248THE8_9BACI/1-107   AC A0A248THE8.1
#=GS A0A0M4FN83_9BACI/2-116   AC A0A0M4FN83.1
#=GS W7ZG60_9BACI/6-119       AC W7ZG60.1
#=GS A0A554A051_9BACI/3-102   AC A0A554A051.1
#=GS A0A1W2GPB1_9BACT/1-117   AC A0A1W2GPB1.1
#=GS Q81HL4_BACCR/1-127       AC Q81HL4.1
A0A366HYB6_9FIRM/17-137             alklankegfy----------------VA.IFLCITLVATMLVYF.VNdnaSNK...DIANKDTAIVEQETTDPVDNTNAIIDEDTIGAEEPATETATQ..VDKT.TKEEEPKTEEPKTE------.-..-..--.----------------------qpkeqapqsntnlkdmvspvgakev..
A0A0A1MM71_9BACI/2-116              .....irllsc----------------LT.IFF--LVLFGCQQEE.SS...NEA...NLQSGVVFIILNKDQSPVENFTITIVQT--S--EPSPDIGVK..PKPT.DVNGRTEMELAEGETYEAAL.V..I..SDyTTQYEEFTVSEDKKDNEFT---fil........................
YBFJ_BACSU/1-130                    ...........MYSTIFNIGQINKYSKLA.IFMSILFLCGCSSQT.HS...SQK...ETTIPVTLHVEDAKGLPVEGVQVTIVKAPSSDEEPSTEIGEI..LGKT.DKNGDIKWDTGRKGDYSVAL.T..K..GE.TSVTHHISLTEDKKDHAIPLVF...........................
A0A2I7SS90_LACSH/8-132              yifiklkyrcf----------IERRSKLR.ILAGILACFILAGCA.HE...ESK..qPKLSPVTIRVLDQEGKPVSRIAVGIE-AVIP-EEERDSVGAIpkAGLT.NENGEIKDQLVPGKKYIIQL.GskK..KE.VVIT------------------dkpmivelt..................
A0A248THE8_9BACI/1-107              ........mkk------------------.ILAVVLIFLLVGCQQ.VS...Q--...-IKITVTITVVDTSNKLVQNIEVSLLDKSSD-----SEQGIQ..LGST.DSEGTITGKLKVGVTYEAALiI..N..DE.TTQYEEFIVSEEKDSEN-----qftf.......................
A0A0M4FN83_9BACI/2-116              ...lkfisncl-----------------LfTLFFVL-ISACSSANnKE...EEQ...PVMATVTINVSDKDNKPLKNIKVT------EDLHTSNDIGHE..IGTT.DKDGNIKWET-QTGKYDVIL.Y..DvkAG.NDSEHTINITEDTT--------tihlvy.....................
W7ZG60_9BACI/6-119                  ....vlgksfg------------------.LLFMLLLLSACS--L.VD...DEP...RNIKDVTFLIVDQHNKPVANRWIGI-DNDSTD--EGREIGTY..LGET.DENGIIERYSNEVREYQIAY.Y..Q..GS.F---------------------vlteedegaritvvitieedq......
A0A554A051_9BACI/3-102              ....rsfylcf------------------.VLVFSLFIAACSQES.EE...PNV...LVVEDVTFKFIDQDGDPVSHVQIPMDNDIR---DGSKEIGRF..LGTT.DSEGMIYIDEMEARTYK---.-..-..--.----------------------leaynrsftidey..............
A0A1W2GPB1_9BACT/1-117              .......mkky----------------LI.VALLAVFVVGVSSYA.FA...DLK...LLPTSLKVLVLDELGNPVEGAEVSLFKSEKD-YRAGTN--LL..VKKTsDKNGEVVFKKLKVSEYFVHA.-..-..--.----------------------dfdgktnigggvlteklvegrinkvnt
Q81HL4_BACCR/1-127                  ...........MFLIILKNG-LNKYNKLLwILFCVLVIIVMTSYI.VN...NEKkfsKVVNSVTFHVKNKEKQPIKDFEIILMKDESP--EPSKEIGIS..IGKT.DEEGKVIWRNVRTGKYIVFL.P..N..NE.T----QMVMINDRDATKKINIS...........................
#=GC seq_cons                       ......h.hph................lh.ILhhlLhlsusostt.hs...spp....lhssVThpVlDpcscPVcshplsl.cs.ps..-susEIGth..lGpT.DcsGcIchcpscspcYpltL.h..p..sp.s......................ht........................
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