GenomeNet

Database: Pfam
Entry: DUF3599
LinkDB: DUF3599
Original site: DUF3599 
#=GF ID   DUF3599
#=GF AC   PF12206.11
#=GF DE   Domain of unknown function (DUF3599)
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Gavin OL;
#=GF SE   pdb_3f3b
#=GF GA   25.00 25.00;
#=GF TC   31.60 31.40;
#=GF NC   24.30 24.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR024556;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This family of proteins is found in bacteria. Proteins in this
#=GF CC   family are approximately 120 amino acids in length. This domain
#=GF CC   is the phage-like element pbsx protein xkdh.
#=GF SQ   21
#=GS A0A081P4F2_9BACL/5-106  AC A0A081P4F2.1
#=GS Q65L27_BACLD/1-116      AC Q65L27.1
#=GS A0A1L6BY09_9CAUD/4-117  AC A0A1L6BY09.1
#=GS A0A1I4PNA6_9BACI/1-115  AC A0A1I4PNA6.1
#=GS YQBH_BACSU/1-117        AC P45924.1
#=GS A0A2P8EL41_9FUSO/1-116  AC A0A2P8EL41.1
#=GS N0AVJ6_9BACI/1-112      AC N0AVJ6.1
#=GS A0A099S7C8_9CLOT/1-115  AC A0A099S7C8.1
#=GS A0A061P548_9BACL/1-115  AC A0A061P548.1
#=GS XKDH_BACSU/1-116        AC P54328.1
#=GS XKDH_BACSU/1-116        DR PDB; 3F3B A; 4-116;
#=GS A8FGQ4_BACP2/1-116      AC A8FGQ4.1
#=GS A0A0D1VL49_ANEMI/1-117  AC A0A0D1VL49.1
#=GS A0A5H2TT84_9CAUD/4-117  AC A0A5H2TT84.1
#=GS R4JG23_9CAUD/1-116      AC R4JG23.1
#=GS A0A658K111_9CLOT/1-116  AC A0A658K111.1
#=GS R9IJQ5_9FIRM/1-116      AC R9IJQ5.1
#=GS A0A160F9A1_9BACI/1-115  AC A0A160F9A1.1
#=GS A0A2K4ZKM1_9FIRM/1-114  AC A0A2K4ZKM1.1
#=GS A0A3A9HXY0_9FIRM/1-117  AC A0A3A9HXY0.1
#=GS A0A3A9D543_9BACT/1-114  AC A0A3A9D543.1
#=GS A0A4V6PWD6_9BACI/1-115  AC A0A4V6PWD6.1
A0A081P4F2_9BACL/5-106             lfdrnctikrlvqiedeyktpkgedwkti---------------------.------------------------GTSRCRLSRK..N..L...RAT..QEAPD.LKTNESYMLYMPIGADIKAGDRV..T..L..NGDTkdFTAGPPYKPG.NHHIEVEVWRE-g....
Q65L27_BACLD/1-116                 .............................MSYKRLLSDRCDIYHLKEDQA.EEARYGIPARDLQPIRTYGETPDLQNVPCYFTEK..N..Q...SIV..QQDPE.QVIYHSYLAHFPAEADVRLHDKA..V..W..NGVA..YTLQQPRNIK.GHHLEVLAVRDE.....
A0A1L6BY09_9CAUD/4-117             ............................n-SYNKLLNHRCNIYHLLEDP-.EDPGYGLAH---TPSFSYPDEPDMIEVPCHFKSG..T.lE...KLE..YKEPR.FKITQEYSVDFAIGTDVRQNDKI..VdlE..TGIT..YIAKAPRDIR.GLKIKV------gieak
A0A1I4PNA6_9BACI/1-115             .............................MSYESLLTDTCSIFHLNSRS-.SGGKWGIPSDDRQQDHYYADNPDVEEQSCYFVEK..N..Q...SIT..QGEPN.NEIIQTYRVHFPIDADIQINDKV..V..W..EGIT..LKAQKPRNIK.DHHIEVNLVRR-v....
YQBH_BACSU/1-117                   .............................MSYQSLLTHRCDIYHLQEKKEnRKQKFGVPVEDVQPVFSYPDEPDIENQPCYFTEK..S..Q...SII..QQESN.VSIYQSFLVHFPATADIRVNDRA..V..W..DGTA..YKLQKPRKIR.NHHWEVTAVRE-v....
A0A2P8EL41_9FUSO/1-116             .............................MSLENLLDHTCNIHHITEEQ-.KSPGYGLPA---SPSFSYPEEPDEAAVPCHFGVR..S..Q...SVAvnQMAPA.NLMEASIKLTLPTGTDIRLNDLV..VdcR..TGLE..YTAEQPRNIR.GHHLFVY-----ikkke
N0AVJ6_9BACI/1-112                 .............................MSYQDLLTDRCAVYHLVENQ-.EAGSFGVPG---ETAYSYPVLSDLQNVSCLFAKE..S..T...KVV..KEEPG.VEIVQSFRVHFLINTDVRFNDKI..V..L..NGTS..YRLEIPRNIR.GHHIEVTAIRN-d....
A0A099S7C8_9CLOT/1-115             .............................MSYRTLLTDKCDIYPLKKKE-.ESLGYGIES--KGNNFYYDKEPDYKEVPCYFSLAglR..N...GVF..QEEPN.NKIYESYNVHFMIGTPIKVNTKV..K..K..DGVF..YKLEVPRTIK.NHHIEVTAVRE-g....
A0A061P548_9BACL/1-115             .............................MSYEQLLDHKCDVYHLVKSE-.RGPGFGVPIESGQPQFDYPEVPDDAAVPCYFAEK..S..Q...SIT..QGQPG.NLIVHRFLIHFLPDTDVRMNDKV..V..W..EGVT..YTLQKPRMIK.NHHIEVTAVRSE.....
XKDH_BACSU/1-116                   .............................MSYRQMLIHRCDIYH-EAAQApSAGRFGIPADRLQPVISYPDTPDEQDVPCYFTEK..T..Q...QLI..QEEPD.QTVYHSFLVHFPLSADIRVNDKI..I..W..ENHK..YILKLPKRIR.HHHWEVVAVRDE.....
#=GR XKDH_BACSU/1-116        SS    .............................XXX-----EEEEEE---EEE----BTTTB---TTS-EEE--SS-SEEEEEEEEEEE..E..E...EEE..ETTTT.EEEEEEEEEEEETTS---TT-EE..E..E..TTEE..EEE-S--EEE.TTEEEEEEEEGG.....
A8FGQ4_BACP2/1-116                 .............................MSYQSLLTDRCDLFHLEHQEA.SRGKFGIPADDLQMTLSYPDAPSLTDLSCYVIEK..N..Q...SLV..QEEPN.TVIYQSYLVHFPLASDIRLHDKM..V..W..NGVS..LKLQQPKIVK.NHHIEVMAVRKE.....
A0A0D1VL49_ANEMI/1-117             .............................MSFASLLIHHCDIYHLQEQE-.IGGGFGIPTNHIQDEYVYGAVPDLSQVECYWERRdlS..N...GFI..LREPY.TAMQEVYTVYFPIETDVRLNDKA..M..Y..NGVE..YRLTRPEPIH.NHHIEVIAVR--le...
A0A5H2TT84_9CAUD/4-117             ............................n-SYNKLLNHRCNIYHLLEDP-.EDPGYGLAH---TPSFSYPDEPDMTEVPCHFKSG..T.lE...KLE..YKEPR.FKITQEYSVDFAIGTDVRQNDKI..VdlE..TGIT..YIAKAPRDIR.GLKIKV------gieak
R4JG23_9CAUD/1-116                 .............................MSYDSLLTDRCDLFHLENEEA.VRGKFGIPAGDLQTDLTYPDTPSMRDVACYVVEK..S..Q...SLV..QEEPN.TVIYQSYLVHFPLASDIRLHDKM..V..W..NGIS..LKLQQPKRVK.NHHMEVMAVRKE.....
A0A658K111_9CLOT/1-116             .............................MAIENFFDHTCNIFHLRSEG-.KSPGFGLPA---APEFKYDADPDLAGVACHFHVK..G..F...SLAfkEQSPH.TDMDGSEKLSLPVGTDVRINDKI..VdlT..TGVE..YTAGVPRNIR.DHHIAVQL----hrtt.
R9IJQ5_9FIRM/1-116                 .............................MAIEDFFDHKCDIYHLTGTV-.QKRGYGLPD---NQEYKYSMQPDIKEQPCHFSVK..SgnV...AII..QKEPQ.RDLEVSQKLTLPIGTDIRINDRI..VdcA..TGCE..YEAEVPRNIR.DHHISVMVHR--vh...
A0A160F9A1_9BACI/1-115             .............................MSYRNLLIHRCDIYHLTKKE-.NGGSWGIPSEDLEEEFSYNDVPDLLNEPCYFTEK..N..Q...TIT..QGDPN.PTVIQSFLVHFLPNADVRQNDKV..V..W..NGIE..FKLQIPKKIR.NHHIEVTAVRSE.....
A0A2K4ZKM1_9FIRM/1-114             .............................MSFENLLDHKCAIYHMKKDS-.KSLGYGINGD----SFSYPMEPDEASIPCHFNVS..D..T...GTL.eQTEDA.NEYVVVGKLNLPYGTDVRVNDKI..V..DlgSGIS..YYAEVPRNIR.DHHIIVQIQR--kg...
A0A3A9HXY0_9FIRM/1-117             ............................m--FEDFLNHKCNIYHLQDEP-.VNIGYGIKADNVKVPQ---TESEKKDIPCHFHVK..M..NnylQVV..QKEPY.SGVEGKTKLSLPAGTDIRMNDTVedC..R..DGLK..YRAGKPIEVYgGHHIVVTLS---rme..
A0A3A9D543_9BACT/1-114             .............................MSFENLLDHKCAIYHMKKDG-.KNLGYGIAG----EAFSYPVEPDVTDVPCHFNVS..D..T...GTM..EQTEDaNEYIVVGKLNLPYGTDVRVNDKI..I..DlgSGIS..YYAEIPRNVR.DHHIIVQIQR--kg...
A0A4V6PWD6_9BACI/1-115             .............................MSFESLLTHRCDIYHLQNSA-.AESNYGIPSEHLQQRESYNDTPDASQVPCYFEEN..S..Q...SMS..QGEPG.QLLSRTMQLFFLPSADVRENSKV..I..L..DGRS..YILQVPNKIR.GHHIEVEAVRS-k....
#=GC SS_cons                       .............................XXX-----EEEEEE---EEE----BTTTB---TTS-EEE--SS-SEEEEEEEEEEE..E..E...EEE..ETTTT.EEEEEEEEEEEETTS---TT-EE..E..E..TTEE..EEE-S--EEE.TTEEEEEEEEGG.....
#=GC seq_cons                      .............................MSacsLLsH+CsIYHLpccp..pssuaGlPu...pssaoYscpPDhpsVPCaFsp+..s..p...ulh..QpEPs.splhpoaplaFPhuoDlRlNDKl..V..h..sGls..YphphPRpI+.sHHIEVhshR..h....
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