GenomeNet

Database: Pfam
Entry: DUF3902
LinkDB: DUF3902
Original site: DUF3902 
#=GF ID   DUF3902
#=GF AC   PF13042.12
#=GF DE   Protein of unknown function (DUF3902)
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Aldam G;0000-0003-3039-8438
#=GF SE   Pfam-B_1357 (release 24.0)
#=GF GA   25.00 25.00;
#=GF TC   28.30 28.30;
#=GF NC   22.10 22.00;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 8 -Z 90746521 HMM pfamseq
#=GF TP   Domain
#=GF DR   INTERPRO; IPR025001;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   family of proteins is found in bacteria. Proteins in this family
#=GF CC   are approximately 170 amino acids in length. There is a
#=GF CC   conserved LGI sequence motif.
#=GF SQ   5
#=GS A0A1B1L7I5_BACTU/2-167  AC A0A1B1L7I5.1
#=GS A0A6L7HMX3_BACAN/2-167  AC A0A6L7HMX3.1
#=GS A0A1B1T5Q5_BACTU/2-163  AC A0A1B1T5Q5.1
#=GS A0A2N0Z8K2_9BACI/3-111  AC A0A2N0Z8K2.1
#=GS Q81BX4_BACCR/2-167      AC Q81BX4.1
A0A1B1L7I5_BACTU/2-167             .............KSVLKSILISFVFSAVGMCWLLFLLFQGDGDWLLSWIGVLMSYLSLYTLIDLYCKNTYDKKLNKWLIKTAVTSFSFAVLGISFCIIHELLTPWSLS...LMVWYWLLMLVLFLTTIISLISLVFVNRKNHNFTVGYRMLILLNVFLTLGPVLWPLLLSIIGNGMNASAG......
A0A6L7HMX3_BACAN/2-167             .............KSVLKSILISFVFSAVSMCWLLFLLFKGDGDWLLSWVGVFMAYLSLYTLIDLYCKNTYDKKISKWLIKTAVTSFSFAVLGISFCIIHELLTPWSLS...LMVWYWLVMLVLFLTTIISLVSLVFVNRKNHNFTGGYRILILLNVLLTLGPVLWPLLLSIIGNGMNASAG......
A0A1B1T5Q5_BACTU/2-163             .............KPVFKKIFFSFIFSVAG----LFCFFKSHGDLLLSGVGVLMSYLSLFNIMSLYPENSHDKIFTKVLKKISVISFSFAVLGISFGVIHELLGAWSLS...IMANYWFLMLGLYVTNIMSLVIIVFANQIDQHYPWIYRTLILLNLLLTLGPVLLPIFILILGNGMNAH--ti....
A0A2N0Z8K2_9BACI/3-111             ncnsssfiknkkm--------------------------------------------------------------------ISIFSFVFAVIGFTFSLYFQTMAYWGLSvslLMEWYWLGAFLAYFFSLLSLF-LNYIKAKRANKKKLDIALIILSSFLICATVIWTSFIII----------awqsgm
Q81BX4_BACCR/2-167                 .............KSVLKSILISFVFSAVGMCWLLYVLFKGDGDWLLSWIGVLMAYLSLYTLIDLYCKNTYDKKINKWLIKTAVTSFSFSVLGISFCIIHELLTPWSLS...LMVWYWLLMLVLFLTTIISLISLAFVNRKNHNFTGGYRMLILLNVFLTLGPVLWPLLLSIIGNGMNASAG......
#=GC seq_cons                      .............KSVLKSILISFVFSAVGMCWLLFlLFKGDGDWLLSWlGVLMuYLSLYTLIDLYCKNTYDKKlsKWLIKTAVTSFSFAVLGISFCIIHELLTPWSLS...LMVWYWLLMLVLFLTTIISLlSLVFVNRKNHNFTsGYRhLILLNVFLTLGPVLWPLLLSIIGNGMNASAG......
//
DBGET integrated database retrieval system