GenomeNet

Database: Pfam
Entry: DUF3958
LinkDB: DUF3958
Original site: DUF3958 
#=GF ID   DUF3958
#=GF AC   PF13125.9
#=GF DE   Protein of unknown function (DUF3958)
#=GF AU   Aldam G;0000-0003-3039-8438
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF SE   Pfam-B_1404 (release 24.0)
#=GF GA   26.30 26.30;
#=GF TC   26.80 27.10;
#=GF NC   26.20 26.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR025014;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   family of proteins is found in bacteria. Proteins in this family
#=GF CC   are approximately 120 amino acids in length. There are two
#=GF CC   conserved sequence motifs: RLF and TWH.
#=GF SQ   34
#=GS A3CLE2_STRSV/5-111       AC A3CLE2.1
#=GS W7C2S8_9LIST/1-63        AC W7C2S8.1
#=GS A0A224XEP3_9LACT/2-110   AC A0A224XEP3.1
#=GS W7BIL8_9LIST/2-108       AC W7BIL8.1
#=GS A0A2A8SIE2_9BACI/11-91   AC A0A2A8SIE2.1
#=GS A0A2X3HHI6_9LIST/6-112   AC A0A2X3HHI6.1
#=GS A0A2X3W8E4_9STRE/2-108   AC A0A2X3W8E4.1
#=GS A0A2V3VZM1_9BACI/3-93    AC A0A2V3VZM1.1
#=GS A0A1H3V469_9BACI/6-113   AC A0A1H3V469.1
#=GS A0A1E5GUV8_9ENTE/5-111   AC A0A1E5GUV8.1
#=GS A0A073K0Q5_9BACI/7-114   AC A0A073K0Q5.1
#=GS A0A6B3VZU6_9BACI/5-115   AC A0A6B3VZU6.1
#=GS A0A1E5KUE5_9ENTE/2-108   AC A0A1E5KUE5.1
#=GS D7V0H2_LISGR/7-113       AC D7V0H2.1
#=GS A0A3D8TSX6_9LIST/2-108   AC A0A3D8TSX6.1
#=GS A0A387BCV2_9LACT/1-108   AC A0A387BCV2.1
#=GS A0A1E5KWS8_9ENTE/2-106   AC A0A1E5KWS8.1
#=GS D7UUF5_LISGR/2-108       AC D7UUF5.1
#=GS A0A0R2HZ11_CARDV/7-114   AC A0A0R2HZ11.1
#=GS A0A099W826_9LIST/6-113   AC A0A099W826.1
#=GS W7CJ47_9LIST/2-108       AC W7CJ47.1
#=GS A0A6L6HDL1_9GAMM/2-108   AC A0A6L6HDL1.1
#=GS A0A6L6HFT7_9GAMM/8-114   AC A0A6L6HFT7.1
#=GS A0A6L6HD75_9GAMM/3-109   AC A0A6L6HD75.1
#=GS A0A6A0B9S8_9LACT/2-110   AC A0A6A0B9S8.1
#=GS A0A1E5GX96_9ENTE/2-108   AC A0A1E5GX96.1
#=GS A0A1E5L0W0_9ENTE/3-106   AC A0A1E5L0W0.1
#=GS A0A6L6H6T8_9GAMM/5-111   AC A0A6L6H6T8.1
#=GS A0A1H3V2V6_9BACI/6-113   AC A0A1H3V2V6.1
#=GS A0A3D8TTX4_9LIST/9-115   AC A0A3D8TTX4.1
#=GS A0A242K5L4_9ENTE/10-114  AC A0A242K5L4.1
#=GS R3W643_9ENTE/2-108       AC R3W643.1
#=GS A0A2A8SHJ1_9BACI/7-114   AC A0A2A8SHJ1.1
#=GS A0A1H3TSF6_9BACI/5-112   AC A0A1H3TSF6.1
A3CLE2_STRSV/5-111                  .....krwta-----LLAKERRLADHEWELYQKLGQAKTQEEDVLC...QLDSMGTWFHDLSYDFEGS..RYYS...KITDYQLDFSHRSRQLKLDIENQIQKLRKDHQNAENQLEEVYQEKRAL........
W7C2S8_9LIST/1-63                   ..........------------------------------------...--------MEEVHERFRKN..DRAF...LHEHLQERVFSLSRSAQAHFEGMDEAFQQEKRKLEDQLNEVAYEKRKA........
A0A224XEP3_9LACT/2-110              ........at--WEELNFRERELQEQEDRIMAETQQVESVTEYYRN...FSQQEQRFFYDLSEKFYHTesELTS...FLNQKMGELDFKTKRILSDLDQASEELQGNRRQIIYDLEELGYDRQKL........
W7BIL8_9LIST/2-108                  .......kiw---DDYLQEERDLTSMEEEKSLEIQEVRKIQSSYEA...HFQQVFRFMDEIRWDFRQN..DRSS...LHEQMQDRVFSISRTIREDLEETGDSYQQEQRELKDCLDEIAYKKRKA........
A0A2A8SIE2_9BACI/11-91              .ysnekteys------------------------------------...RKGQSYRLFDRILETWHND.rELGQ...FFHNLRQDAQQIGRKLTHELEDQKETLLKEKQNLSNLENDLHYQRQKL........
A0A2X3HHI6_9LIST/6-112              .........r-TPEMITREIYRISEEKYRAEQSQRKLEHLEEAFDE...HIYQKDRLFGELQQTFLTG..EMAY...ETESRVGWLKREQHLIMDKITTEREQLRQKRYLLDEQEESLYRVRRN-a.......
A0A2X3W8E4_9STRE/2-108              .........t-KGDQLRQKELELSEQLEDKGRQRGRAEQLYSDFEW...YASDAQFLEQQLREAAYQS..KYAW...QLEDTANQMRASKLQLFNDLTDYIDRLKKDERYIEDQLDVLYTEKQKA........
A0A2V3VZM1_9BACI/3-93               .........e-KLIEMKNELDYLSEEILSVENEKSRLIQAEEELHF...LFRKNNRLLQELKYEWKTG..EMSF...IIHDTEVELNQHERKAIQSVEDEIHSLKE-------------------kef.....
A0A1H3V469_9BACI/6-113              ........nd--IEVLAQQLREVAEEQAVNERERKKLERQEEDVEE...FYRKEARLFHDFLSTWQRD.sRMRH...FLEEQQRSCRREQALTWENIEERREVLQKERRQLQEKETEFFTKRRT-l.......
A0A1E5GUV8_9ENTE/5-111              ......ekel----KINQQLRQVAMEQENICREIRELEELEADYFS...IHQQEQRYYQELIENNQGS..RYIS...HFIELDEEAKSFHQYERQRLEDIAERLVKEEFNLRNKEEALYIERKQL........
A0A073K0Q5_9BACI/7-114              ..........QKMNELNNKLQTISEEQRHNQFAIQKQEQRELALDQ...LKNQGRRVFDRVLETWYKD.kELGH...SFLDMRQDVQHTERKLTLELENEKEALRQEKKRLEDREHELYYERKKL........
A0A6B3VZU6_9BACI/5-115              drhekklqvy----------NELQKNEEERLEVIKEIEKNELAFDEfhdVMLKGKQLLDELSHFWRGV..EASA...FLNDTEDTLFETTREAEKAFQEERECLENEKKILYEQELAL-------nkqyaqlr
A0A1E5KUE5_9ENTE/2-108              .........k-TWNEVQAEKLQLERDQEGLENTQRSVRQTEESYEE...YFFHQSTLFEELQEEFAQS..ETDL...LYQDMAEQIHWQKRALQEVLEEQEHEMKKELQGIEDKKEALAWAERA-i.......
D7V0H2_LISGR/7-113                  ........at--AEELTQRLYRIGEEKQEVEGQQRELRRLEEEFQT...HLQQKNRLLDEISHTWQKG..QMAH...RTTDRMLQIRKEEQGLMERFWEERETTKKAHQQLEAKEEAVYYQRKAA........
A0A3D8TSX6_9LIST/2-108              .......ktw---TEWQQEERQLMEKEDENQQKRRAVQQLQESYEN...HFRQGLRFMEEVSWQFRKN..DRAF...LRADRQEQVFSLSRSAQEHFDIMEEALQQEKRDLEKQANEVAYGKRKA........
A0A387BCV2_9LACT/1-108              .........m---ETFESVNRQIMQAEEDFD-ALSRQERKLSEFED...RFNETQRLVQQTTDIFGTN.sQNGHnreIASEMLSRSMTVNAHFSELVEEGHKSIKQEKNRLDDKREELYKQRS--tl......
A0A1E5KWS8_9ENTE/2-106              ......eeql-----IRRKLWDNAEAQDENSYNIRLQEENITQLES...IYTQQNQFFNELQGKWQEH..ELGS...YLAEARDELIYCQQKSLALVTDEMDELVSQKRQLMDQEEQFSNE----lht.....
D7UUF5_LISGR/2-108                  ..........EQLEVINCGLGDLAEKQDHVTKAYRRNENTRAALEE...HNFQRERLFQELKETFQTG..EMSV...SLDELNFETRRYGQQLREKLLESEQQLKKRRRTLEEQEEELYRKRRKA........
A0A0R2HZ11_CARDV/7-114              ..........TKLDAINQKIRYIQEDLDDNRRKLSKQEQIEQESQI...IFSKSKELFDEFQYTWRKD.nTMSN...LINDLQDEAAHLNYKNEFDLEDKRQILKNEKNQLENKEQTCYEERKAI........
A0A099W826_9LIST/6-113              .........r-EIDSWNQRLQNVADDQYAKEQEIRRQKQLLDEVDV...IHNRNNRLFDALGSTWHRD.rEMAV...FLDTQQHDYQRKHFHVVDGMAEEQVRLEQEKRALLEKESDYYAARRKV........
W7CJ47_9LIST/2-108                  ..........KTPESYQQEEQLLLRKEEENLQKRREIERLKESYET...HFRQGLRFMDGLRYTFRQN..DRAF...IHENMQDRVFAFSHSIRDDLEETAELYQREKRQLEDQLNEIAYEKRKA........
A0A6L6HDL1_9GAMM/2-108              .........k-ELELLQLEEQQLQSKEESIANEEKQVRRIKESYEQ...HFHEARHFLDNLCYLFHKN..EQGT...FYQSLMDEYSQESRKILEHLEIDEIELHDQKKRVVDQLEDIDYEKRKL........
A0A6L6HFT7_9GAMM/8-114              .......eke---AQYNLELKQVSLDQEVKDKEIRKQERRMNDFQE...LESVEQRFYNEVAYLQLDD.kTNG-...FLEQAIEESRWFAREEQEYLEESKETLYQEKRLLLEKEDQLFAERKKI........
A0A6L6HD75_9GAMM/3-109              .........e-KIDDVIRERQKIADQLFESENDKRELEKFDERMNI...LYRKNQQFFFEVESMYSTG..ELNY...LSMDLTQELNHSRQQVFSAIEDQKEHIDKERRNLEDKESDLYYKQLK-l.......
A0A6A0B9S8_9LACT/2-110              .......dew---EELYVKERYLQQQEENLANENRHIEFVTDDFQD...YHYQEQQFFTELSEKFYHNdsVLSN...FMNGKLSDVSYKTNRFLSNLEETYEEIQSKRQQISYDIEELSYERQKL........
A0A1E5GX96_9ENTE/2-108              ..........RKLEEIQKEEKQLYLKEETLSSELNQVKRVKESYDQ...HFYEARHFFDDICYQFNKN..KQGN...FYKSIFDEFSQKERQVMDYLENDEEELRIQKKKVLNQLEDIGYEKRKV........
A0A1E5L0W0_9ENTE/3-106              .......eqv-----LRKKLLGIAEAQDENRQDIRLQEENIAQLDS...IYTQQNQFFNELQGKWQEH..ELGS...YLAEARDELNYCQQKSLELVTDEMEQFLYEKKNLVDQEEKATEEL---rf......
A0A6L6H6T8_9GAMM/5-111              .....dreti-----IKMELMQLELEQESNQRAIRKLAEAEYEYSE...IQSSEQHFYQELLEANQGA..EKQY...FFADLEAESRDLQQKQQQRLQERQDELLAQKKALISQEDRLYMERRKL........
A0A1H3V2V6_9BACI/6-113              ........nd--IEVLTQQLREVAEEQAVNEKERKKLERLEEDVGE...FYRKEARLFDDFLSTWQRD.sRMRH...FLVEQQRSCRREQALTWENIEERREMLQKERRQLQEKETEFFTKRRT-l.......
A0A3D8TTX4_9LIST/9-115              .....ekqkr-----IRYQLKVADEDYEKHSNKLEGLKEAQQDYQM...GINQGKRLLDELEYYWQGD..EAQH...FIFQIKDELFQEEREINERFYDRHDEMEREKRRLQGCVQKLENDYRK-a.......
A0A242K5L4_9ENTE/10-114             .......lla-----LEEEENRIANERYKAKQTEQEMKKLSKDYER...IFTRSGQLFYKLEKIFQKS..QAKS...IFTEIFSDIQREEQDIFERIDKEKIVLTQKEKALEKRENEIYYEKRRL........
R3W643_9ENTE/2-108                  ..........RRLEEIQTEERQLYSKEEALDSEANQVRRIKETYDQ...HLYEAKHFFDAICYQFHKN..EQGN...VYRALFDEFSQKSRQVMNELEKDEEELRRQKRKLSNQLEDIGYEKRKL........
A0A2A8SHJ1_9BACI/7-114              ..........KQINQLNEKLRSLSEEQSQNQHAIQKQEQTEADFYE...WKGQSYRLFDRILETWHND.rELGQ...FFHNLRQDAQQMERKLTHELEDQKEMLLKEKQNLSNLENDLYHQRQKL........
A0A1H3TSF6_9BACI/5-112              ......derl----QIKTQLRQLADEQTENRHAFARYEQDEQTLFE...IQQKNRRLFDNLFYSWNKD.rQLLN...QLEQQHNELFDHQQKLREELENKKDCILQENKRLNNVEDNLYRDLR--sl......
#=GC seq_cons                       .............p.lppc.ppltccpcp.ppphpchcphppshpp...hhpppp+hap-lptpapps..-hup...hhpphpp-hpppppphhcclE-pc-pLpp-++pLpspcpclhhc++ph........
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