GenomeNet

Database: Pfam
Entry: DUF5390
LinkDB: DUF5390
Original site: DUF5390 
#=GF ID   DUF5390
#=GF AC   PF17365.4
#=GF DE   Family of unknown function (DUF5390)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD050839
#=GF GA   25.00 25.00;
#=GF TC   26.70 91.70;
#=GF NC   24.50 23.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR035334;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of unknown function found in Caenorhabditis.
#=GF SQ   21
#=GS A0A2G5ULS9_9PELO/52-192   AC A0A2G5ULS9.1
#=GS YLW3_CAEEL/1-98           AC P34406.1
#=GS A0A2G5UMD0_9PELO/23-163   AC A0A2G5UMD0.1
#=GS A0A2H2IT92_CAEJA/1-136    AC A0A2H2IT92.1
#=GS A0A2G5URM7_9PELO/1-129    AC A0A2G5URM7.1
#=GS A0A2G5UMM1_9PELO/25-173   AC A0A2G5UMM1.1
#=GS A8Y3M7_CAEBR/22-162       AC A8Y3M7.1
#=GS G0N3F3_CAEBE/29-175       AC G0N3F3.1
#=GS A8X7X8_CAEBR/22-161       AC A8X7X8.1
#=GS E3LYR3_CAERE/25-163       AC E3LYR3.1
#=GS A0A2G5ULP4_9PELO/149-289  AC A0A2G5ULP4.1
#=GS G0N3F4_CAEBE/5-148        AC G0N3F4.1
#=GS A0A2G5UM08_9PELO/199-339  AC A0A2G5UM08.1
#=GS A0A2G5ULP4_9PELO/23-150   AC A0A2G5ULP4.1
#=GS YP92_CAEEL/24-162         AC Q09243.2
#=GS A0A2G5URL8_9PELO/1-115    AC A0A2G5URL8.1
#=GS G0N3F5_CAEBE/19-162       AC G0N3F5.1
#=GS A0A2G5ULQ3_9PELO/24-163   AC A0A2G5ULQ3.1
#=GS A8Y3M9_CAEBR/25-173       AC A8Y3M9.1
#=GS E3MNW6_CAERE/29-177       AC E3MNW6.1
#=GS A0A2G5UM08_9PELO/20-155   AC A0A2G5UM08.1
A0A2G5ULS9_9PELO/52-192              .........ytfa---PSPENQ........PDATIGVT-FKEFAKWYKGLFAATLQEKTAQGLHNHMFYVDKQMSFIMCHE.......ATNMHYP.........EFLLWFQSFMLNYKDPVVKITSVISTGKDiGEMILNVEAGTD..G-GIRENFDVKIGAMRDD.TGGWKILIVNRALGC..........
YLW3_CAEEL/1-98                      .............---------........---------------------------------MAHNNYLDLEMLFNECNA.......QHYENLG.........MFFKWLQQFAAHHEDPKITIKDFKGDKTS.GEMILHVNTFTL..F-KYRQEFDMKVSALNDN.GLGWKILFVDRSLGC..........
A0A2G5UMD0_9PELO/23-163              ............y-TNPPPLSF........PQDATIGSDFKLFSAWYSGLLATTIQEKTAEAMDYHMFYVDKGMQFIECNA.......VTHLHYD.........DYVRWFKAYVLAYSDPVVKRTSVISTGKDmGEMYLNVEAGTE..G-GFRENFDMKVAAMRDD.TGGWKILIVNRALGC..........
A0A2H2IT92_CAEJA/1-136               .............-------MF........PKVSRTRNAV-LFLQYFITTFKHMFQNSRP-AADEHFDYYDEQVKGYECYIgemgygtTTHQDFKllsitncsaHLKLYFERYVASHSDPQIEVIYAVMTRDG.MNMHVEFHVTTM.tWFGFSDHFHIIINAYN--.---------------vsli......
A0A2G5URM7_9PELO/1-129               .............---------........--MIRTKSAH-QFITFYMGTFRDVFKNTSN--IMYHFNYYDEGVKGIGCYM.......EKEMDYT.........RLRSYFERYATTHRDPEIKVIAALMIRGG.AHMTAEFHVTTKqkWLGFEDHFHMVVRVVNDE.TVGWGVRHLNMAFDC..........
A0A2G5UMM1_9PELO/25-173              .....rnflpdsv--------FqklasddpPDMTQDLTTFKEFVPFYVNLFKEAMTKKTRETFLAHMNYVDKEMLFHECHA.......VQYENYG.........AFANWFQQFVTYHDDPIVEITSQRQTGNDqGEMILNVDVQAQ..F-KYRQNFDMKVAALNDK.KLGWKVLIVDRTLGC..........
A8Y3M7_CAEBR/22-162                  ...........rf-THPPPFP-........PDATLGGT-FKLFASWYSGLLATTIQEKTAEALNYHMFYVDKQMQFIECNA.......VTHLHYD.........DFLRWFKAFILAYSDPVVKITSIITTGKDiGEMILNVEAGTE..G-GFRENFDVKIGAMRDEtTTGWKILIVNRAIGC..........
G0N3F3_CAEBE/29-175                  .rfivnpddaslq------FME........PDLTSDPTTFEEFTKHYVKLFEEMMTSKTRESFQAYDNLLDHEMMFNECNA.......PKYENYH.........WYVHWLQQFVNNHSDPKIKIEKFNGDKEK.GEMLLNIDVETK..IAKARLNFDMKVSCMNDQ.GLGWKVLFVDRSKGC..........
A8X7X8_CAEBR/22-161                  .............FVSDSRSLY........PKMIRTKSAH-QFITFYMGTFRDFFKNTSN--IMYHFNYYDEGVKGIGCYM.......EKEMDYT.........RLRSYFERYATTHRDPEIKVIAALMIRGG.AHMTAEFHVTTKqkWLGFKDHFHIVVRVVNDE.TVGWGVRHLNMAFDC..........
E3LYR3_CAERE/25-163                  ............i-ISDPRSMF........PKVMRTKSAF-HFIHFFMGTFRQMFRNKTQ--VIDHFNYYDDQVKGNDCYI.......QGGLDFT.........RLKDYFEKYAKTHHDPKISVIFAVMTKDA.IHMTAEFHVSSQ.tWLGFEDHFHMLIRAVNDD.AVGWGVRYLSMAFNC..........
A0A2G5ULP4_9PELO/149-289             .........ytfa---PSPENQ........PDATIGVT-FKEFAKWYKGLFAATLQEKTAQGLHNHMFYVDKQMSFIMCHE.......ATNMHYP.........EFLLWFQSFMLNYKDPVVKITSVISTGKDiGEMILNVEAGTD..G-GIRENFDVKIGAMRDD.TGGWKILIVNRALGC..........
G0N3F4_CAEBE/5-148                   ihfndveplqlik---------........RDLTSDPTCFKEFSKFYVDLFIKMIKTKTRETFQAHMHYVDIEMMFNECNA.......PQYENYA.........AFANWLQQFVTFHDDPIVEIQELKGDTEK.GEMLLNIDVQAQ..Y-KFRQNFDMKVSCLNDQ.GLGWKVLFVDRSIGC..........
A0A2G5UM08_9PELO/199-339             ............y-TNPPPLSF........PQDATIGSDFKLFSAWYSGLLATTIQEKTAEAMDYHMFYVDKGMQFIECNA.......VTHLHYD.........DYVRWFKAYVLAYSDPVVKRTSVISTGKDmGEMYLNVEAGTE..G-GFRENFDMKVAAMRDD.TGGWKILIVNRALGC..........
A0A2G5ULP4_9PELO/23-150              ............y-TNPPPLSF........PQDATIGSDFKLFSAWYSGLLATTIQEKTAEAMDYHMFYVDKGMQFIECNA.......VTHLHYD.........DYVRWFKAYVLAYSDPVVKRTSVISTGKDmGEMYLNVEAGTE..G-GFRENFDMKVAAMR--.---------------vryt......
YP92_CAEEL/24-162                    .............FISDPRSMF........PKMVRTKNAF-HFLQYFMGTFRRMFRNKTE--MIEHFNYYDDQVKGTDCHI.......QEELDFA.........RFKSYFDRYTRTHYNPEIRIIFAIMTKDS.SHMTVEFHVTSQ.sWFGFEDHFHMIIRAVNDE.NVGWGVRYLSMAFNC..........
A0A2G5URL8_9PELO/1-115               .............---------........-----------------MGTFRDVFKNTSN--IMYHFNYYDEGVKGIGCYM.......EKEMDYT.........RLRSYFERYATTHRDPEIKVIAALMIRGG.AHMTAEFHVTTKqkWLGFEDHFHMVVRVVNDE.TVGWGVRHLNMAFDC..........
G0N3F5_CAEBE/19-162                  ihfndagplqlik---------........RDLTSDPTTFKEFSKFYVDLFIKMIKTKTRETFQAHMHYVDIEMMFNECNA.......PQYENYA.........AFANWLQQFVTFHDDPIVEIQELKGDSEK.GEMLLNIDVQAQ..Y-KFRQNFDMKVSCLNDQ.GLGWKVLFVDRSIGC..........
A0A2G5ULQ3_9PELO/24-163              ..........tfa---PSPENQ........PDATIGVT-FKEFAKWYKGLFAATLQEKTAQGLHNHMFYVDKQMSFIMCHE.......ATNMHYP.........EFLLWFQSFMLNYKDPVVKITSVISTGKDiGEMILNVEAGTD..G-GIRENFDVKIGAMRDD.TGGWKILIVNRALGC..........
A8Y3M9_CAEBR/25-173                  .......rnflpe------SVFqklasddpPDMTQDLTTFKEFVPFYVNLFKEAITKKTRENFLAHMNYVDKEMLFHECHA.......VQYENYG.........AYANWFQQFVTYHDDPIVEITSQRQTGNDqGEMILNVDVQAQ..F-KYRQNFDMKVAALNDK.KLGWKVLIVDRTLGC..........
E3MNW6_CAERE/29-177                  .............FINPSPSDFalqkldgdTDMTKDHTTFKEFVPYYIDLFKKMFSPKTRENYQAHIEYVDVQMMFNECNA.......RQYENFA.........MFNHWLQQFVGNHEDPIIEIKSQRQTGEDmGEVMLNIDVQAL..W-KYRVNFDMRVSFLNDQ.SLGWKVLFVDRSIGC..........
A0A2G5UM08_9PELO/20-155              ...vvrntpapgd--------P........EDLTQDLT-FKQFVPFYVNMLELAITEKSRDIIKTHMFYVDKQVAFHECNA.......ATNLHYA.........EFANWFKQFVTYHDDPIVKTTSLRSTGDDqGEMILNIDVLTQ..Y-KYRQNFDMKIAALKV-.---------------skkeswesvs
#=GC seq_cons                        ..............................PchspshosFKpFstaYhsLFtphhppKTtpshptHhpYVDcpMpFhECpt.......spphcYs.........cahpWFppastsHcDPll+lpuhltTscc.GEMhLNl-VsTp..a.GaR-NFDMKVuAhNDc.shGWKlLhVsRuhGC..........
//
DBGET integrated database retrieval system