GenomeNet

Database: Pfam
Entry: DUF5552
LinkDB: DUF5552
Original site: DUF5552 
#=GF ID   DUF5552
#=GF AC   PF17706.3
#=GF DE   Family of unknown function (DUF5552)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   cORF:C11orf40
#=GF GA   25.00 25.00;
#=GF TC   25.80 26.20;
#=GF NC   23.50 23.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR041435;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of unknown function found in primates.
#=GF SQ   17
#=GS G3RYH7_GORGO/158-191      AC G3RYH7.2
#=GS G3RYH7_GORGO/1-159        AC G3RYH7.2
#=GS A0A2K5N1R8_CERAT/1-36     AC A0A2K5N1R8.1
#=GS A0A0D9QW71_CHLSB/1-160    AC A0A0D9QW71.1
#=GS H2Q2Y3_PANTR/1-168        AC H2Q2Y3.2
#=GS A0A2K6PFD6_RHIRO/1-189    AC A0A2K6PFD6.1
#=GS A0A2K6E3S9_MACNE/1-157    AC A0A2K6E3S9.1
#=GS A0A2K5Y7K0_MANLE/151-176  AC A0A2K5Y7K0.1
#=GS A0A096N9B7_PAPAN/1-157    AC A0A096N9B7.2
#=GS H2NEH1_PONAB/1-63         AC H2NEH1.1
#=GS A0A2K6M7I1_RHIBE/1-190    AC A0A2K6M7I1.1
#=GS A0A2K5Y7K0_MANLE/1-157    AC A0A2K5Y7K0.1
#=GS A0A2K5N1R8_CERAT/132-157  AC A0A2K5N1R8.1
#=GS A0A2R8ZXY2_PANPA/1-168    AC A0A2R8ZXY2.1
#=GS A0A2K5TXS0_MACFA/1-157    AC A0A2K5TXS0.1
#=GS CK040_HUMAN/1-217         AC Q8WZ69.1
#=GS A0A2K5N1R8_CERAT/34-138   AC A0A2K5N1R8.1
G3RYH7_GORGO/158-191                 ...t--------------------------------------------------------------------------------------------------------...........--------------------------------------------------------------------------------KYSILALLQVFVGK.NCMDHVLLHVDVNYLKSLP...................
G3RYH7_GORGO/1-159                   ....MALVQALVPREREPKLSILQMDRRDPQHSSHWCPERERVKLLTLKPRETSKNILINFYRAFNLDKDVFIHQANHPLTVPSSVVMGDNGHTLAEDDKRLCFRVL-...........--LE------SLSWISAPLPVGAMKHQLLCDLMDLITLSFWLAGQCMSLKATNMQHCKCSIAT-------------------------------.-------------------k..................
A0A2K5N1R8_CERAT/1-36                ..mv------LGPRERQAKLSILQMDRRAPQHGSRWCPEKE-------------------------------------------------------------------...........----------------------------------------------------------------------------------------------.-------------------vss................
A0A0D9QW71_CHLSB/1-160               ....-------------------------------------------------SKNILINFYRAFNLDEDVFIHQANHPLTVLSSVMMGNNDHSLAEGDKRPCFRVLP...........CYLEHVSSRVSISWISAHLPVGAMKHQLLCYLMDLI-MSFWLAGQCMSLKATNMQNCKYSIATWDW-IELDCTDYKTLPSEHSVLALLQVFVGQ.NCMDHVLLHVDVN------...................
H2Q2Y3_PANTR/1-168                   ....MALVQALVPREREPKLSILQMDRGDPQHSSHWCPERERVKLLTLKPRETSKNILINFYRAFNLDKDVFIHQANHPLTVLSSVVMGDNGHTLAEDDKRPCFRG-P...........CYLERVSSGICISWISAPLPVGAMKHQLLCDLMDLITLSFWLAGQCMSLKATNMQHCKCSIAT-------------------------------.-------------------ky.................
A0A2K6PFD6_RHIRO/1-189               ..mv------LGPRERQAKLSILQMDRGAPQHGSRWCPERERSKLLTLKARESQPC----SCRAFDLDEDVFIHQANHPLTVLSSVVMGSNDHTLAEGDKRPCFRLFHfniaslalqrlCYLEHVSSRVSVSWISALLPAGAMKHQLLCYLMDLIMLF-----LCMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkpmcidrvdvnclks.
A0A2K6E3S9_MACNE/1-157               ..mv------LGPRERQAKLSILQMDRGAPQHGSRWCPEKEA--------RESQP----CSCRAFNLDEDVFIHQANHPLTVLSSVVMGSNDHSLAEGDKRPCYRVLP...........CYLEHVSSRVSISWISALLPVGAMKHQLLCYLMDLIMLF-----LCMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkt..............
A0A2K5Y7K0_MANLE/151-176             lnwt--------------------------------------------------------------------------------------------------------...........--------------------------------------------------------------------------------------------GKtMCMDRVLLHVDVNYLKSLP...................
A0A096N9B7_PAPAN/1-157               ..mv------LGPRERQAKLSILQMDRGAPQHGSRWCPEKEA--------RESQP----CSCRAFNLDEDVFIHQANHPLTVLSSVVMGSNDHSLAEGDKRPCYRVLP...........CYLEHVSSRVSISWISALLPVGAMKHQLLCYLMDLIMLF-----LCMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkt..............
H2NEH1_PONAB/1-63                    ....-----------------------------------------------ETSKNILINFYRAFNLDKDVFIHQANHPLTVPSSVVMGDNGHTLAEDDKRPCFRVLC...........----------------------------------------------------------------------------------------------.-------------------lasrmt.............
A0A2K6M7I1_RHIBE/1-190               ...m-----ALGPRERQAKLSILQMDRGAPQHGSRWCPERERSKLLTLKARESQPC----SCRAFNLDEDVFIHQANHPLTVLSSVVMGSNDHTLAEGDKRPCFRLFHfniaslalqrlCYLEHVSSRVSVSWISALLPAGAMKHQLLCYLMDLIMLF-----LCMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkpmcidrvdvnclksl
A0A2K5Y7K0_MANLE/1-157               ..mv------LGPRERQAKLSILQMDRGAPQHGSRWCPEKEA--------RESQP----CSCRAFNLDEDVFIHQANHPLTVLSSVVMGSNDHSLAEGDKRPCFRVLP...........CYLEHVSSRVSISWISALLPVGAMKHQLLCYLMDLIMLF-----LCMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkt..............
A0A2K5N1R8_CERAT/132-157             lnwt--------------------------------------------------------------------------------------------------------...........--------------------------------------------------------------------------------------------GKtMCMDRVLLHVDVNYLKSLP...................
A0A2R8ZXY2_PANPA/1-168               ....MALVQALVPREREPKLSILQMDRGDPQHSSHWCPERERVKLLTLKPRETSKNILINFYRAFNLDKDVFIHQANHPLTVLSSVVMGDNGHTLAEDNKRPCFRG-P...........CYLERVSSGICISWISAPLPVGAMKHQLLCDLMDLITLSFWLAGQCMSLKATNMQHCKCSIAT-------------------------------.-------------------ky.................
A0A2K5TXS0_MACFA/1-157               ..mv------LGPRERQAKLSILQMDRGAPQHGSRWCPEKEA--------RESQP----CSCRAFNLDEDVFIHQANHPLTVLSSVVMGSNDHSLAEGDKRPCYRVLP...........CYLEHVSSRVSISWISALLPVGAMKHQLLCYLMDLIMLF-----LCMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkt..............
CK040_HUMAN/1-217                    ....MALVQALVPREREPKLSILQMDRGDPQHSSHWCPEREKVKLLTLKPRETSKNILINFYRAFNLDKDVFIHQANHPLTVPSSVVMGDNGHTLAEDDKRPCFRVLP...........CYLERVSSGISISWISAPLPVGAMKHQLLCDLMDLITLSFWLAGQCMSLKATNMQHCKCSIATSDWAIELDRTDYKTLPSEYSILALLQVFAGK.NCMDRVLLHVDVNYLKSLP...................
A0A2K5N1R8_CERAT/34-138              ..vs-----------------------------------------------------------SFNLDEDVFIHQANHPLTVLSSVVMGSNDHSLAEGDKRPCYRVLP...........CYLEHVSSRVSISWISALLPVGAMKHQLL----------------CMSLKATNMQHCKCSIATWDWPLN-------------------------.-------------------wtgkt..............
#=GC seq_cons                        ..........LsPRERpsKLSILQMDRtsPQHuS+WCPE+E..........Eop.......hRAFNLDcDVFIHQANHPLTV.SSVVMGsNsHoLAEsDKRPCaRlh............CYLE+VSStlslSWISA.LPsGAMKHQLLC.LMDLI.h.......CMSLKATNMQHCKCSIAT...................................................h..................
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