GenomeNet

Database: Pfam
Entry: DUF5839
LinkDB: DUF5839
Original site: DUF5839 
#=GF ID   DUF5839
#=GF AC   PF19157.6
#=GF DE   Family of unknown function (DUF5839)
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF SE   Manual
#=GF GA   23.70 23.70;
#=GF TC   23.70 24.70;
#=GF NC   23.40 23.40;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 8 -Z 90746521 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR043895;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of unknown function is associated with  the
#=GF CC   biosynthetic gene cluster for glycocin F. The  family appears to
#=GF CC   be restricted to Firmicutes.
#=GF SQ   25
#=GS A0A850QWR0_9LACO/12-105   AC A0A850QWR0.1
#=GS A0A1X7E7D5_9BACI/2-85     AC A0A1X7E7D5.1
#=GS W4F7N0_9BACL/2-85         AC W4F7N0.1
#=GS A0A429ZAN5_9ENTE/6-86     AC A0A429ZAN5.1
#=GS A0A6I1MSV2_9CLOT/5-93     AC A0A6I1MSV2.1
#=GS A0A0D6A5D1_9LACO/6-90     AC A0A0D6A5D1.1
#=GS A0A1B2IUK5_9LACO/13-107   AC A0A1B2IUK5.1
#=GS A0A6I1MP19_9CLOT/5-93     AC A0A6I1MP19.1
#=GS A0A1S2R8M9_9BACI/3-85     AC A0A1S2R8M9.1
#=GS G9ZNW5_9LACO/31-123       AC G9ZNW5.1
#=GS W7KQI0_CYTFI/2-83         AC W7KQI0.1
#=GS A0A3A1QLL4_9BACI/2-84     AC A0A3A1QLL4.1
#=GS C0XK46_LENH9/26-118       AC C0XK46.1
#=GS A0A3N5ZQI7_9BACL/2-81     AC A0A3N5ZQI7.1
#=GS A0A0R2ITP8_9LACO/6-89     AC A0A0R2ITP8.1
#=GS A0A6L5GU98_9FIRM/7-90     AC A0A6L5GU98.1
#=GS A0A0R2EPJ1_9LACO/8-105    AC A0A0R2EPJ1.1
#=GS A0A0F4KQ37_9LACO/12-105   AC A0A0F4KQ37.1
#=GS N9WER6_9CLOT/3-89         AC N9WER6.1
#=GS R0AKB6_9FIRM/167-236      AC R0AKB6.1
#=GS A0A3N5ZQK6_9BACL/2-81     AC A0A3N5ZQK6.1
#=GS A0A265Q981_9FIRM/99-171   AC A0A265Q981.1
#=GS K2H4P6_9BACI/2-84         AC K2H4P6.1
#=GS A0A143HHM6_9BACL/4-85     AC A0A143HHM6.1
#=GS A0A845QPV5_9FIRM/108-160  AC A0A845QPV5.1
A0A850QWR0_9LACO/12-105              .............sv--RRVVVCRHLNQNKTTKEY.QLSEKSYNWRLSTHtldsrgqvFTL..PEVPIGQIILVKT..AY.....GLKSVVVv....knMQVTGL....VARKVARALRRVVTVTDQ..............
A0A1X7E7D5_9BACI/2-85                ...............KDNNTISGFHIKHRTENTIK.VHPKK-YNWHIPKA........LRH..LDIQPGDIVRACAgpEN.....KVCTILV.......MEAFRE....DIEIAGKTYKPVVRLVEK..............
W4F7N0_9BACL/2-85                    ..............f-ENNTITGFHIKSSMEETIMqLNTTQLYNWHIPKM........LRN..ESIQQGDIVLVHS..KN.....NVARVLV.......MNVSRE....ELEETGKRYKRVVKILER..............
A0A429ZAN5_9ENTE/6-86                ...............KDDNTIFAKHIKKEDKENIV.LGSKE-YQWHIPK-........VLR..GTIRVGDKVLVQS..KG.....KIQTVVV.......TKLIRE....DIELTNKKYKRVRYVLPN..............
A0A6I1MSV2_9CLOT/5-93                ............qyr---TLVVAMHFKIDENKMMV.INPEP-YTWTIGKK........ALKpgEVVEKGDIVFAKV..KHrnnkiTCKPVLV.......INVTQE....LITEESKKHRDITRLIEK..............
A0A0D6A5D1_9LACO/6-90                ............hie---TVINGHHVNKNH-----.YFSLKSYQWRVRHHk......tMGK..KNLAIGQLAWVEV..TG.....QVKPVLVii..tgiHKLTEA....ADRQVARQLKTVKTITT-n.............
A0A1B2IUK5_9LACO/13-107              ............mpt---QIIGALHINVDDNGQQH.LNTEKIFYWRMGMYtknattgkKTA..TLPALGTIASVFT..QF.....GRQDVMV.......VQTFESgvdaASQTQVSHLRRVF-----ttsde.........
A0A6I1MP19_9CLOT/5-93                ............qyr---TLVVAMHFKIDENKMMV.INPEP-YTWTIGKK........ALKpgEVVEKGDIVFAKV..KHrnnkiTCKPVLV.......INVTQE....LITEDSKKHRDITRLIEK..............
A0A1S2R8M9_9BACI/3-85                ..............l-ENNRIAAFHVLSNKDGIIK.LATSKMYYWHIPKY........LRN..EPIQQGDIVLVLT..AN.....GFAPVLV.......MQVFRE....EFKETQKRYKRVVKVLER..............
G9ZNW5_9LACO/31-123                  ...............EERLVIGAIHIRLEDGGKRV.LQTDQEFFWRITERttn.egapLQD..GFPELGRVAVVPT..KY.....GWRPVVVv....qeQRVTGE....AAIKAADDLKRVRRFTAN..............
W7KQI0_CYTFI/2-83                    ..............n-NDNTIAAFHIKSNKGGILK.LNTNKMYHWHIPK-........PLR..TKVHQGDIVLVRT..AR.....GLEQVLV.......MKVFRE....EFEETQRKYKQVVKVLER..............
A0A3A1QLL4_9BACI/2-84                ...............ENNNTISGFHVMKNEGGVIE.LNTNKTYNWNIPKV........LRE..DPIKQGDIVLVRT..KH.....GFKPVLV.......MNVFRE....EFEETKKRYKKVVKVLER..............
C0XK46_LENH9/26-118                  ..............q-VRRVIGGLHIRLEEDGKRT.LATDHEFFWKIGKKtgn.egseLVD..GFPELGRVAVVET..KF.....GWRPVLVv....reQTVTGE....AAVKAADDLRHVSRFT--vn............
A0A3N5ZQI7_9BACL/2-81                ...............MENNTLSGFHIRSKKGDPLK.LYPKK-YTWHIPKD........LRK..LNIQPGDIVAV--..GK.....AKSPFLV.......TEVFRE....ELEDTGKRYKRVVSVFEK..............
A0A0R2ITP8_9LACO/6-89                ............hie---TVINGHHVNKNH-----.YFSLKSYQWRVRHH.......kTMG..KNLAIGQLAWVEV..TG.....QVKPVLVii..tgiHKLTEA....ADRQVARQLKTVKTITT-n.............
A0A6L5GU98_9FIRM/7-90                .............ie---TVINGHHVNKNH-----.YFSLKSYQWRVRHHk......tVGK..KNLAIGQLAWVEV..TG.....QPKPVLVii..tgiHTLTEP....ADRQVARQLKTVKTITT-n.............
A0A0R2EPJ1_9LACO/8-105               ...............KSRRVISAVHLNKDEAGELT.LNLTHEYQWRTGAHtyfangepAQN..TEPTVGTIAIAKT..YR.....GDKRVVIvdstfvaKEVVSP....NELIQANRLRRITQYTDE..............
A0A0F4KQ37_9LACO/12-105              ..............m-VRRAVEVMHLNRNQETGKY.YLSHKGYFFQISSHtkdskvkkFYG..RMIPLGQIVKVQT..NY.....GWKPAVVv....knMEVTGD....FALKAVKRLKRVTRITDQ..............
N9WER6_9CLOT/3-89                    ...............KELNVIKGMHFGTDENGNMI.LNNDKAFHWRIPN-........ALT..GKVNKGDMVIVRV..KTksgaiKHVPVLV.......IDVINN....FENTENLNLKNIVRVLDR..............
R0AKB6_9FIRM/167-236                 rrirrqgikavfneg--------------------.---GKQYQWEIPLK........-LI..DKIAPGDRVVVET..FY.....GPQRVTV.......KEII-P....LAKRTGRKVRRI------eek...........
A0A3N5ZQK6_9BACL/2-81                ...............MENNTLSGFHIRSKKGDPLK.LYPKK-YTWHIPKY........LRE..LNIQPGDIVAV--..GK.....AKSPFLV.......SEVFRE....ELEDTGKRYKRVVAILEK..............
A0A265Q981_9FIRM/99-171              ..vkkkmakyvhcvh--------------------.FGSSKFYTWRVPEK........LNN..VKFKKGDIVEVDT..MY.....GNKYVEV.......RETAEY....EYDEKTK-----------evinlikt......
K2H4P6_9BACI/2-84                    ...............KTNNTIAGCHVLRDEDGLWK.VRTSKLYSWNIPKV........LRQ..DPIQPGDIVEVAT..SR.....GRKPVLV.......MDVFRE....EFEETQRRYKKVLKVLER..............
A0A143HHM6_9BACL/4-85                ..............n-NNNTLSGFHIRKITEGKFK.LYPKK-YIWHIPKN........LRH..LNIQPGDIVEVRA..KD.....QKAPVLV.......VNVYRE....ELEEVGKVYQRVTKLIER..............
A0A845QPV5_9FIRM/108-160             ............gve--------------------.------HSWRVPE-........-DK..KIPKRGDIVYVHA..KG.....QVKPVIV.......QNIRR-....------------------lpkkytkelktmvg
#=GC seq_cons                        .................pssIsuhHlppscts.hh.ltopK.YpW+Is+t........htp..pplphGDIVhVcs..pt.....shcPVLV.......hpVhc-....thccsu+chK+Vsplh-p..............
//
DBGET integrated database retrieval system