GenomeNet

Database: Pfam
Entry: DUF5885
LinkDB: DUF5885
Original site: DUF5885 
#=GF ID   DUF5885
#=GF AC   PF19232.5
#=GF DE   Family of unknown function (DUF5885)
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moenttinen H;0000-0003-2461-0690
#=GF SE   Manual
#=GF GA   33.20 33.20;
#=GF TC   36.30 35.90;
#=GF NC   32.90 29.10;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 90746521 -E 1000 --cpu 8 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR045367;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of uncharacterised proteins of unknown function
#=GF CC   found in viruses.
#=GF SQ   19
#=GS S4VTI5_9VIRU/56-320       AC S4VTI5.1
#=GS A0A2U7UCD5_9VIRU/55-319   AC A0A2U7UCD5.1
#=GS A0A2U7UC52_9VIRU/47-157   AC A0A2U7UC52.1
#=GS A0A811BS81_9VIRU/203-313  AC A0A811BS81.1
#=GS A0A0B5IY69_9VIRU/42-152   AC A0A0B5IY69.1
#=GS A0A811BNZ5_9VIRU/62-328   AC A0A811BNZ5.1
#=GS A0A2U7UFH9_9VIRU/53-317   AC A0A2U7UFH9.1
#=GS A0A811BRZ9_9VIRU/56-320   AC A0A811BRZ9.1
#=GS A0A4D6EI47_9VIRU/122-386  AC A0A4D6EI47.1
#=GS A0A0B5JA51_9VIRU/4-220    AC A0A0B5JA51.1
#=GS A0A811BTY3_9VIRU/42-152   AC A0A811BTY3.1
#=GS A0A0B5J930_9VIRU/62-328   AC A0A0B5J930.1
#=GS A0A4D6EI36_9VIRU/61-327   AC A0A4D6EI36.1
#=GS A0A2U7UFJ8_9VIRU/42-152   AC A0A2U7UFJ8.1
#=GS A0A4D6EHI1_9VIRU/42-152   AC A0A4D6EHI1.1
#=GS S4W2W1_9VIRU/56-320       AC S4W2W1.1
#=GS S4VXW1_9VIRU/42-152       AC S4VXW1.1
#=GS S4VVB1_9VIRU/136-246      AC S4VVB1.1
#=GS S4VR85_9VIRU/62-328       AC S4VR85.1
S4VTI5_9VIRU/56-320                  ...........PPPTNPTNPDNCQPPCAGTQVCVNGQCKDNTLACTTDAQCGTCMTCV........A.G.......KCAPKPSCCGGVTCGAGQTCDAKTNTCVYIAGYCSADHPCPAGSACDLAKNACIAQPPYGPDSG...KGCVAGFGAWIWELDQQTNSGAWRCRCANDNIYKSANECSPLASATLCAAENLDPNVVVPASSVPAFAAYDWGNQPVVINKTTAAAAVPSPL.AGPCPCKPGWAGGSCTEDRTCNGRGTWNETTGQCVCNQEFSGFQSCRDDINCT.SWTPPDC...
A0A2U7UCD5_9VIRU/55-319              ...........PPPVNPSNPADCNPPCTGTQVCIDKVCKDTALSCTTDAQCGTCTTCV........A.G.......VCTPKASCCGGVTCAAGQTCDTKTNTCVYTKGYCDANRACPPGSACDPSKNTCIAQPPYGPDSG...KGCFEGFGAWIWELDPKTNSGTWRCRCANPTLYNSADECSPLARSTLCAAENLDPNALTPASSVPAFAAYGWANQPVLINKSTAGAAVPSPL.AGTCPCKPGWAGGSCTEDRTCNGRGTWNETTGQCACNIDYSGYGNCQDDPNCT.SWTAPNC...
A0A2U7UC52_9VIRU/47-157              ........rsk---ANPPGFRPCRPECAATQVCINGTCRAPTFACTSAEDCPLCTDCV........QtGvgsdavsRCVPVANCCNGATCALGQYCAN--GQCRLVPGACRADADCAPGETCDTATATCR----------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------rq.
A0A811BS81_9VIRU/203-313             ........rsr---ANPPGFKPCRPACAAADVCVDGVCRAPTFTCSDAQDCALCTNCVqtgvgaaaA.Y.......RCVPVPGCCDGKTCAVGQYCVD--GQCRLLPGACRVDGDCAPTQRCDPTTGLCVS---------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------r..
A0A0B5IY69_9VIRU/42-152              ........rsr---ANPPGFKPCRPACAATDVCVDGVCRAPTFTCANAEDCPLCTNCVqtgvgaaaA.Y.......HCVPVAGCCGGKTCALGQYCVD--GQCRLIPGACRVDGDCASDHRCNAASATCV----------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------pr.
A0A811BNZ5_9VIRU/62-328              ..........g-GGNDPTNPDDCTPPCGSGTVCIDKQCKANTLACTTDAQCGTCMTCV........A.G.......ACTPKASCCGGVTCGAGQTCDATTNTCVYVKGYCSADHPCGSGFVCDTAKNACIAEPPYGPGTGphaSGCVRGFGNWVATRDPATGDAVWACSCVNGSLYDPGHGCSPLADQTVCTAANLDPAALVPASKVKAFADYGWGDHPVLINPSTAGDAVPSPLgGGVCPCKSGWGGGTCTTDQSCSGNGRWTGDTTGCAC---FSCHNSGGEENGATyRWTGSRC...
A0A2U7UFH9_9VIRU/53-317              ...........PPPVDPSNPADCNPPCTGTQVCIDKVCKDTALSCTTDAQCGACTTCV........A.G.......VCTPKASCCGGVTCAPGQTCDTKTNTCVYTKGYCDANRACPPGSACDLSKNTCIAQPPYGPDSG...KGCFEGFGAWIWELDPKTNSGAWRCRCANQIIYKSKNECSPLATATLCAAENLDPNALAPASSVPAFSGYGWGNSRVVINKSTAGAAVPSPL.TGTCPCKPGWAGGSCTEDRTCNGRGTWNDTTGQCVCNINHSGYANCQDDPNCT.SWTPPNC...
A0A811BRZ9_9VIRU/56-320              ...........PPPTNPTNPDDCQPPCAGTQVCVNKQCKDSTLSCTSDSQCGTCTTCV........A.G.......KCTPKASCCGGVTCGAGQTCDATTNTCVYIAGYCSADHPCPSGSACDLAKNACIAQPPYGPDNG...KGCVAGFGAWIWELDRQSNSGAWRCRCANPVIYSSTNECSPLASATLCAAENLDPNAVTPASSVPAFAAYDWGNQPVVINATTAGAAVPSPL.AGTCPCKPGWAGGSCTQDRTCNGRGTWNETTGQCVCNQEFSGFQSCQDDINCT.SWTPPNC...
A0A4D6EI47_9VIRU/122-386             ...........PPPTNPTNPDNCQPPCAGTQVCVNGQCKDSTLSCTSDSQCGTCMTCV........A.G.......KCTPKASCCGGVTCGAGQTCDTKTNTCVYLAGYCSADHPCPTGSACDLAKNACIAQPPYGPDSG...KGCVAGFGAWIWELDQQTNSGAWRCRCANDIIYSSRNECSPLASATLCAAENLDPNAVTPASSVPAFAAYGWGNQPVVINKTTAGAAVPSPL.TGPCPCRPGWAGGSCTEDRTCNGRGTWNETTGQCVCNQEFSGFQTCQDDIYCT.SWTPPNC...
A0A0B5JA51_9VIRU/4-220               gqvhtqglvlr-----------------------------------------------........-.-.......----------RVTCGAGQTCDAKTNKCVYVAGYCSADHPCPTGSACDLAKNACIAQPPYGPDSG...KGCVAGFGAWIWELDQQSNSGAWRCRCANPDIYSSANECSPLASATLCAAENLDPNAVTPASSVPAFGAYGWGNQPVVINKTTAGAAVPSPL.AGPCPCRPGWAGGSCTEDRTCNGRGTWNETTGQCVCNQEFSGFQTCQDDIHCT.SWTPPNC...
A0A811BTY3_9VIRU/42-152              ........rsr---ANPPGFKPCRPACAAADVCVDGTCRAPTFTCADAEDCPRCTNCVqtgvgadaA.L.......RCVPVAGCCGGKTCALGQYCVD--GQCRLIPGACRTDTDCASTRRCDAASATCV----------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------pr.
A0A0B5J930_9VIRU/62-328              ..........g-GGNNPTNPDDCTPPCGSGTVCIDKQCKANALSCTSDSQCGTCMTCV........A.G.......KCTPKASCCGGVTCGAGQTCDAKTNTCVYVKGYCSADHPCGSGFVCDTAKNACIAEPPYGPGTGphaSGCVRGFGNWVATRDPATGDAVWACSCVNGSLYNPGHGCSPLADQTVCTAANLDPSALVPASKVPAFSNYGWGDHPVLINPSTAGDAVPSPLgGGVCPCKSGWGGGTCTTDQSCSGNGRWTGDTTGCAC---FSCHNSGGRENGATyRWTGRRC...
A0A4D6EI36_9VIRU/61-327              ..........g-GGNNPTNPDDCTPPCGSGTVCIDKQCKANALSCTSDNQCGTCMTCV........A.G.......KCTPKASCCGGVTCGAGQTCDAKTNTCVYVKGYCSADHPCGSGFVCDTAKNACIAEPPYGPGTGphaSGCVRGFGNWVATRDPDTGDAVWACSCVNSALYNPGYGCSPLVGQNECTATNLDPSALVPASKVPAFSNYGWGDHPVLINPSTAGDPVPSPLgGGVCPCKSGWGGGTCTTDQSCSGNGRWTGDTTGCAC---FSCHNSGGRENGATyRWTGSRC...
A0A2U7UFJ8_9VIRU/42-152              ........rsk---ANPPGFRPCRPECAATQVCVNGTCRAPTFTCTSAQDCPLCTDCVqtgtgstaA.S.......RCVPVANCCNGATCALGQYCAN--GQCRLIPGACRVDGDCASGRTCDTATATC-----------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------hna
A0A4D6EHI1_9VIRU/42-152              ........rsr---ANPPGFKPCRPACAATDVCVDGVCRAPTFTCANAEDCPLCTNCVqtgvgaaaA.Y.......HCVPVAGCCGGKTCALGQYCVD--GQCRLIPGACHVDGDCASDHRCNAASATCV----------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------pr.
S4W2W1_9VIRU/56-320                  ...........PPPTNPTNPDDCRPPCAGTQVCVNGQCKDSTLSCTSDSQCGTCMTCV........A.G.......KCTPKASCCGGVTCGAGQTCDATTNKCVYIAGYCSADHPCPTGSACDLAKNACIAQPPYGPDSG...KGCVEGFGAWIWELDRQTNSGAWRCRCANPDIYSSANECSPLASATLCAAENLDPNAVTPASSVPAFAAYGWGNQPVVINKTTAGAAVPSPL.AGPCPCKPGWAGGSCTLDRTCNGRGTWNETTGQCVCDKEFSGFQSCSDDIHCT.SWLPPDC...
S4VXW1_9VIRU/42-152                  ........rsr---ANPPGFKPCRPACAAADVCVDGTCRAPTFTCADAEDCPRCTNCTqtgvgaaaA.Y.......HCVPVAGCCGGKTCALGQYCVD--GQCRLIPGACRVDADCASTRRCDAATATCV----------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------pr.
S4VVB1_9VIRU/136-246                 ........rsr---ANPPGFKPCRPACAAADVCVDGVCRAPTFTCANAEDCPLCTNCVqtgvgaaaA.Y.......RCVPVPGCCDGKTCAVGQYCVN--GQCRLIPGACRVDGDCAPTQRCDPTTGLCVS---------...--------------------------------------------------------------------------------------------.-----------------------------------------------------.-------r..
S4VR85_9VIRU/62-328                  ..........g-GGNDPTNPDDCTPPCGSGTVCIDRQCKANTLACTTDAQCGTCMTCV........A.G.......ACTPKASCCGGVTCGAGQTCDAKTNTCVYVKGYCSADHPCGSGFVCDTAKSACIAEPPYGPGTGphaSGCVRGFGNWVATRDPATGDAVWACSCVNGSLYNPGHGCSPLADQTVCTAANLDPAALVSASKVKAFADYGWGDHPVLINPSTAGDAVPSPLgGGVCPCKSGWGGGTCTTDQSCSGNGRWTGDTTGCAC---FSCHNSGGEENGATyRWTGSRC...
#=GC seq_cons                        ..........t...sNPss.csCpPsCAuspVClDtpC+AsThoCTosppCstChsCV........A.u.......+CsPhAuCCGGsTCusGQhCss..spChhlsGhCpADpsCuoGpsCDsApssClu.........................................................................................................................................................................
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